Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
LCE3DQ9BYE3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LCE3DQ9BYE3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
LCE3DQ9BYE3 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC8.88□□□□□ -0.99
LCE3DQ9BYE3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LCE3DQ9BYE3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
LCE3DQ9BYE3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
LCE3DQ9BYE3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LCE3DQ9BYE3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
LCE3DQ9BYE3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LCE3DQ9BYE3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LCE3DQ9BYE3 HES6-203ENST00000409160 1600 ntTSL 2 BASIC8.6□□□□□ -1.03
LCE3DQ9BYE3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
LCE3DQ9BYE3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LCE3DQ9BYE3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC8.53□□□□□ -1.04
LCE3DQ9BYE3 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC8.52□□□□□ -1.05
LCE3DQ9BYE3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LCE3DQ9BYE3 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC8.48□□□□□ -1.05
LCE3DQ9BYE3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LCE3DQ9BYE3 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
LCE3DQ9BYE3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LCE3DQ9BYE3 AL356512.1-201ENST00000607453 1739 ntBASIC8.43□□□□□ -1.06
LCE3DQ9BYE3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
LCE3DQ9BYE3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
LCE3DQ9BYE3 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC8.39□□□□□ -1.07
LCE3DQ9BYE3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
LCE3DQ9BYE3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCE3DQ9BYE3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
LCE3DQ9BYE3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCE3DQ9BYE3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LCE3DQ9BYE3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
LCE3DQ9BYE3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC8.29□□□□□ -1.08
LCE3DQ9BYE3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
LCE3DQ9BYE3 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LCE3DQ9BYE3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LCE3DQ9BYE3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC8.25□□□□□ -1.09
LCE3DQ9BYE3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
LCE3DQ9BYE3 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LCE3DQ9BYE3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC8.22□□□□□ -1.09
LCE3DQ9BYE3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
LCE3DQ9BYE3 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC8.2□□□□□ -1.1
LCE3DQ9BYE3 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
LCE3DQ9BYE3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCE3DQ9BYE3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LCE3DQ9BYE3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
LCE3DQ9BYE3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LCE3DQ9BYE3 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LCE3DQ9BYE3 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LCE3DQ9BYE3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LCE3DQ9BYE3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
LCE3DQ9BYE3 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LCE3DQ9BYE3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC8.11□□□□□ -1.11
LCE3DQ9BYE3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LCE3DQ9BYE3 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
LCE3DQ9BYE3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
LCE3DQ9BYE3 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
LCE3DQ9BYE3 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LCE3DQ9BYE3 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LCE3DQ9BYE3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LCE3DQ9BYE3 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LCE3DQ9BYE3 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LCE3DQ9BYE3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
LCE3DQ9BYE3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LCE3DQ9BYE3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LCE3DQ9BYE3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LCE3DQ9BYE3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
LCE3DQ9BYE3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
LCE3DQ9BYE3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
LCE3DQ9BYE3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LCE3DQ9BYE3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LCE3DQ9BYE3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC7.95□□□□□ -1.14
LCE3DQ9BYE3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LCE3DQ9BYE3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC7.94□□□□□ -1.14
LCE3DQ9BYE3 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LCE3DQ9BYE3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
LCE3DQ9BYE3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
LCE3DQ9BYE3 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC7.93□□□□□ -1.14
LCE3DQ9BYE3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
LCE3DQ9BYE3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
LCE3DQ9BYE3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LCE3DQ9BYE3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LCE3DQ9BYE3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
LCE3DQ9BYE3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
LCE3DQ9BYE3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LCE3DQ9BYE3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
LCE3DQ9BYE3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC7.85□□□□□ -1.15
LCE3DQ9BYE3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC7.85□□□□□ -1.15
LCE3DQ9BYE3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC7.84□□□□□ -1.15
LCE3DQ9BYE3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC7.84□□□□□ -1.15
LCE3DQ9BYE3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
LCE3DQ9BYE3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
LCE3DQ9BYE3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LCE3DQ9BYE3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
LCE3DQ9BYE3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
LCE3DQ9BYE3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LCE3DQ9BYE3 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LCE3DQ9BYE3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
LCE3DQ9BYE3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
LCE3DQ9BYE3 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC7.82□□□□□ -1.16
LCE3DQ9BYE3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms