Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMIM20Q8N5G0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM20Q8N5G0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SMIM20Q8N5G0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SMIM20Q8N5G0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM20Q8N5G0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM20Q8N5G0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SMIM20Q8N5G0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.45■□□□□ 0.86
SMIM20Q8N5G0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM20Q8N5G0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM20Q8N5G0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM20Q8N5G0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM20Q8N5G0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SMIM20Q8N5G0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM20Q8N5G0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SMIM20Q8N5G0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM20Q8N5G0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM20Q8N5G0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM20Q8N5G0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM20Q8N5G0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMIM20Q8N5G0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC19.76■□□□□ 0.75
SMIM20Q8N5G0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM20Q8N5G0 AL161658.1-201ENST00000623641 1967 ntBASIC19.74■□□□□ 0.75
SMIM20Q8N5G0 AC139426.1-201ENST00000568218 2529 ntBASIC19.58■□□□□ 0.73
SMIM20Q8N5G0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM20Q8N5G0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM20Q8N5G0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM20Q8N5G0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM20Q8N5G0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM20Q8N5G0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM20Q8N5G0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM20Q8N5G0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMIM20Q8N5G0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMIM20Q8N5G0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM20Q8N5G0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SMIM20Q8N5G0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM20Q8N5G0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM20Q8N5G0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM20Q8N5G0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM20Q8N5G0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM20Q8N5G0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM20Q8N5G0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM20Q8N5G0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMIM20Q8N5G0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.13■□□□□ 0.65
SMIM20Q8N5G0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM20Q8N5G0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM20Q8N5G0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SMIM20Q8N5G0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM20Q8N5G0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC19.07■□□□□ 0.64
SMIM20Q8N5G0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.07■□□□□ 0.64
SMIM20Q8N5G0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
SMIM20Q8N5G0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.05■□□□□ 0.64
SMIM20Q8N5G0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.05■□□□□ 0.64
SMIM20Q8N5G0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.03■□□□□ 0.64
SMIM20Q8N5G0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMIM20Q8N5G0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM20Q8N5G0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SMIM20Q8N5G0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SMIM20Q8N5G0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM20Q8N5G0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM20Q8N5G0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM20Q8N5G0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM20Q8N5G0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
SMIM20Q8N5G0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM20Q8N5G0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM20Q8N5G0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM20Q8N5G0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SMIM20Q8N5G0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SMIM20Q8N5G0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMIM20Q8N5G0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMIM20Q8N5G0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMIM20Q8N5G0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM20Q8N5G0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM20Q8N5G0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SMIM20Q8N5G0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.69■□□□□ 0.58
SMIM20Q8N5G0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM20Q8N5G0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM20Q8N5G0 AC135731.1-201ENST00000569415 2548 ntBASIC18.66■□□□□ 0.58
SMIM20Q8N5G0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM20Q8N5G0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.64■□□□□ 0.57
SMIM20Q8N5G0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM20Q8N5G0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.64■□□□□ 0.57
SMIM20Q8N5G0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM20Q8N5G0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
SMIM20Q8N5G0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC18.52■□□□□ 0.56
SMIM20Q8N5G0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.52■□□□□ 0.56
SMIM20Q8N5G0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.51■□□□□ 0.55
SMIM20Q8N5G0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM20Q8N5G0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM20Q8N5G0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC18.49■□□□□ 0.55
SMIM20Q8N5G0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMIM20Q8N5G0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.47■□□□□ 0.55
SMIM20Q8N5G0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM20Q8N5G0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM20Q8N5G0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SMIM20Q8N5G0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SMIM20Q8N5G0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM20Q8N5G0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM20Q8N5G0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM20Q8N5G0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms