Protein–RNA interactions for Protein: P60602

ROMO1, Reactive oxygen species modulator 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROMO1P60602 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ROMO1P60602 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ROMO1P60602 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ROMO1P60602 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
ROMO1P60602 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ROMO1P60602 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ROMO1P60602 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ROMO1P60602 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ROMO1P60602 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC15.17■□□□□ 0.02
ROMO1P60602 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ROMO1P60602 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ROMO1P60602 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ROMO1P60602 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ROMO1P60602 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
ROMO1P60602 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC14.99□□□□□ -0.01
ROMO1P60602 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ROMO1P60602 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ROMO1P60602 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ROMO1P60602 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ROMO1P60602 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ROMO1P60602 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ROMO1P60602 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
ROMO1P60602 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ROMO1P60602 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ROMO1P60602 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ROMO1P60602 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ROMO1P60602 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ROMO1P60602 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ROMO1P60602 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ROMO1P60602 AL161658.1-201ENST00000623641 1967 ntBASIC14.6□□□□□ -0.07
ROMO1P60602 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ROMO1P60602 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ROMO1P60602 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
ROMO1P60602 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC14.5□□□□□ -0.09
ROMO1P60602 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC14.46□□□□□ -0.09
ROMO1P60602 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ROMO1P60602 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ROMO1P60602 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ROMO1P60602 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ROMO1P60602 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ROMO1P60602 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC14.38□□□□□ -0.11
ROMO1P60602 AC139426.1-201ENST00000568218 2529 ntBASIC14.38□□□□□ -0.11
ROMO1P60602 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC14.35□□□□□ -0.11
ROMO1P60602 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ROMO1P60602 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ROMO1P60602 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ROMO1P60602 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ROMO1P60602 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ROMO1P60602 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ROMO1P60602 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ROMO1P60602 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ROMO1P60602 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ROMO1P60602 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ROMO1P60602 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ROMO1P60602 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ROMO1P60602 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ROMO1P60602 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
ROMO1P60602 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC14.07□□□□□ -0.16
ROMO1P60602 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ROMO1P60602 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
ROMO1P60602 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ROMO1P60602 ST7-202ENST00000323984 2142 ntTSL 5 BASIC14.02□□□□□ -0.17
ROMO1P60602 ST7-207ENST00000393449 2127 ntTSL 5 BASIC14.02□□□□□ -0.17
ROMO1P60602 ST7-205ENST00000393446 2114 ntTSL 5 BASIC14□□□□□ -0.17
ROMO1P60602 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
ROMO1P60602 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ROMO1P60602 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ROMO1P60602 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ROMO1P60602 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ROMO1P60602 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ROMO1P60602 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ROMO1P60602 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ROMO1P60602 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ROMO1P60602 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
ROMO1P60602 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ROMO1P60602 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
ROMO1P60602 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ROMO1P60602 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ROMO1P60602 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ROMO1P60602 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ROMO1P60602 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ROMO1P60602 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC13.89□□□□□ -0.19
ROMO1P60602 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ROMO1P60602 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ROMO1P60602 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ROMO1P60602 HES6-203ENST00000409160 1600 ntTSL 2 BASIC13.85□□□□□ -0.19
ROMO1P60602 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ROMO1P60602 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ROMO1P60602 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC13.84□□□□□ -0.19
ROMO1P60602 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ROMO1P60602 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ROMO1P60602 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ROMO1P60602 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ROMO1P60602 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ROMO1P60602 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
ROMO1P60602 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
ROMO1P60602 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ROMO1P60602 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ROMO1P60602 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ROMO1P60602 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms