Protein–RNA interactions for Protein: P60602

ROMO1, Reactive oxygen species modulator 1, humanhuman

Predictions only

Length 79 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROMO1P60602 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ROMO1P60602 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ROMO1P60602 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ROMO1P60602 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
ROMO1P60602 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ROMO1P60602 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ROMO1P60602 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ROMO1P60602 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ROMO1P60602 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC15.17■□□□□ 0.02
ROMO1P60602 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ROMO1P60602 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ROMO1P60602 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ROMO1P60602 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ROMO1P60602 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
ROMO1P60602 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC14.99□□□□□ -0.01
ROMO1P60602 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ROMO1P60602 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ROMO1P60602 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ROMO1P60602 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ROMO1P60602 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ROMO1P60602 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ROMO1P60602 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
ROMO1P60602 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ROMO1P60602 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ROMO1P60602 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ROMO1P60602 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ROMO1P60602 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ROMO1P60602 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ROMO1P60602 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ROMO1P60602 AL161658.1-201ENST00000623641 1967 ntBASIC14.6□□□□□ -0.07
ROMO1P60602 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ROMO1P60602 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ROMO1P60602 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
ROMO1P60602 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC14.5□□□□□ -0.09
ROMO1P60602 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC14.46□□□□□ -0.09
ROMO1P60602 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ROMO1P60602 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ROMO1P60602 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ROMO1P60602 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ROMO1P60602 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ROMO1P60602 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC14.38□□□□□ -0.11
ROMO1P60602 AC139426.1-201ENST00000568218 2529 ntBASIC14.38□□□□□ -0.11
ROMO1P60602 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC14.35□□□□□ -0.11
ROMO1P60602 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ROMO1P60602 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ROMO1P60602 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ROMO1P60602 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ROMO1P60602 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ROMO1P60602 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ROMO1P60602 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ROMO1P60602 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ROMO1P60602 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ROMO1P60602 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ROMO1P60602 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ROMO1P60602 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ROMO1P60602 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ROMO1P60602 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
ROMO1P60602 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC14.07□□□□□ -0.16
ROMO1P60602 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ROMO1P60602 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
ROMO1P60602 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ROMO1P60602 ST7-202ENST00000323984 2142 ntTSL 5 BASIC14.02□□□□□ -0.17
ROMO1P60602 ST7-207ENST00000393449 2127 ntTSL 5 BASIC14.02□□□□□ -0.17
ROMO1P60602 ST7-205ENST00000393446 2114 ntTSL 5 BASIC14□□□□□ -0.17
ROMO1P60602 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
ROMO1P60602 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ROMO1P60602 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ROMO1P60602 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ROMO1P60602 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ROMO1P60602 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ROMO1P60602 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ROMO1P60602 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ROMO1P60602 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ROMO1P60602 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
ROMO1P60602 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ROMO1P60602 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
ROMO1P60602 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ROMO1P60602 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ROMO1P60602 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ROMO1P60602 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ROMO1P60602 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ROMO1P60602 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC13.89□□□□□ -0.19
ROMO1P60602 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ROMO1P60602 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ROMO1P60602 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ROMO1P60602 HES6-203ENST00000409160 1600 ntTSL 2 BASIC13.85□□□□□ -0.19
ROMO1P60602 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ROMO1P60602 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ROMO1P60602 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC13.84□□□□□ -0.19
ROMO1P60602 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ROMO1P60602 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ROMO1P60602 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ROMO1P60602 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ROMO1P60602 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ROMO1P60602 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
ROMO1P60602 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
ROMO1P60602 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ROMO1P60602 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ROMO1P60602 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ROMO1P60602 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms