Protein–RNA interactions for Protein: P04553

PRM1, Sperm protamine P1, humanhuman

Predictions only

Length 51 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRM1P04553 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PRM1P04553 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
PRM1P04553 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PRM1P04553 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PRM1P04553 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
PRM1P04553 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PRM1P04553 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PRM1P04553 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC8.06□□□□□ -1.12
PRM1P04553 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
PRM1P04553 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
PRM1P04553 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PRM1P04553 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PRM1P04553 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PRM1P04553 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC7.88□□□□□ -1.15
PRM1P04553 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
PRM1P04553 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
PRM1P04553 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PRM1P04553 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
PRM1P04553 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PRM1P04553 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PRM1P04553 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PRM1P04553 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC7.71□□□□□ -1.18
PRM1P04553 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PRM1P04553 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
PRM1P04553 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
PRM1P04553 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PRM1P04553 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PRM1P04553 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC7.62□□□□□ -1.19
PRM1P04553 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PRM1P04553 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
PRM1P04553 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC7.6□□□□□ -1.19
PRM1P04553 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
PRM1P04553 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PRM1P04553 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
PRM1P04553 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PRM1P04553 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PRM1P04553 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
PRM1P04553 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PRM1P04553 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
PRM1P04553 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC7.55□□□□□ -1.2
PRM1P04553 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
PRM1P04553 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
PRM1P04553 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PRM1P04553 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PRM1P04553 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC7.5□□□□□ -1.21
PRM1P04553 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
PRM1P04553 ST7-205ENST00000393446 2114 ntTSL 5 BASIC7.49□□□□□ -1.21
PRM1P04553 ST7-202ENST00000323984 2142 ntTSL 5 BASIC7.48□□□□□ -1.21
PRM1P04553 ST7-207ENST00000393449 2127 ntTSL 5 BASIC7.48□□□□□ -1.21
PRM1P04553 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PRM1P04553 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PRM1P04553 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
PRM1P04553 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PRM1P04553 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PRM1P04553 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.22
PRM1P04553 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC7.46□□□□□ -1.22
PRM1P04553 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
PRM1P04553 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
PRM1P04553 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PRM1P04553 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC7.41□□□□□ -1.22
PRM1P04553 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PRM1P04553 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
PRM1P04553 AL161658.1-201ENST00000623641 1967 ntBASIC7.39□□□□□ -1.23
PRM1P04553 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PRM1P04553 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
PRM1P04553 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PRM1P04553 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PRM1P04553 AC139426.1-201ENST00000568218 2529 ntBASIC7.37□□□□□ -1.23
PRM1P04553 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
PRM1P04553 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRM1P04553 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PRM1P04553 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PRM1P04553 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
PRM1P04553 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
PRM1P04553 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRM1P04553 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRM1P04553 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRM1P04553 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC7.29□□□□□ -1.24
PRM1P04553 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRM1P04553 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PRM1P04553 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
PRM1P04553 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PRM1P04553 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PRM1P04553 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
PRM1P04553 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PRM1P04553 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PRM1P04553 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
PRM1P04553 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PRM1P04553 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
PRM1P04553 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PRM1P04553 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
PRM1P04553 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PRM1P04553 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PRM1P04553 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PRM1P04553 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PRM1P04553 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PRM1P04553 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC7.21□□□□□ -1.26
PRM1P04553 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
PRM1P04553 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC7.2□□□□□ -1.26
PRM1P04553 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms