Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPCS1Q9Y6A9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPCS1Q9Y6A9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SPCS1Q9Y6A9 CLDN5-201ENST00000403084 2357 ntBASIC17.58■□□□□ 0.41
SPCS1Q9Y6A9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SPCS1Q9Y6A9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SPCS1Q9Y6A9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPCS1Q9Y6A9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SPCS1Q9Y6A9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
SPCS1Q9Y6A9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC17.58■□□□□ 0.4
SPCS1Q9Y6A9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 AC012676.1-201ENST00000574705 1949 ntBASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS1Q9Y6A9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS1Q9Y6A9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS1Q9Y6A9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS1Q9Y6A9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS1Q9Y6A9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SPCS1Q9Y6A9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SPCS1Q9Y6A9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SPCS1Q9Y6A9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SPCS1Q9Y6A9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SPCS1Q9Y6A9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SPCS1Q9Y6A9 AC091060.1-201ENST00000623524 1766 ntBASIC17.51■□□□□ 0.39
SPCS1Q9Y6A9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS1Q9Y6A9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS1Q9Y6A9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS1Q9Y6A9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS1Q9Y6A9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SPCS1Q9Y6A9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SPCS1Q9Y6A9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS1Q9Y6A9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 AC079834.2-201ENST00000609776 1949 ntBASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPCS1Q9Y6A9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPCS1Q9Y6A9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS1Q9Y6A9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS1Q9Y6A9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS1Q9Y6A9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS1Q9Y6A9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS1Q9Y6A9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS1Q9Y6A9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS1Q9Y6A9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
SPCS1Q9Y6A9 BX255925.1-201ENST00000566954 1854 ntBASIC17.46■□□□□ 0.38
SPCS1Q9Y6A9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPCS1Q9Y6A9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPCS1Q9Y6A9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms