Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
FNDC3AQ9Y2H6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
FNDC3AQ9Y2H6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.83■■□□□ 1.73
FNDC3AQ9Y2H6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.83■■□□□ 1.73
FNDC3AQ9Y2H6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
FNDC3AQ9Y2H6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
FNDC3AQ9Y2H6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
FNDC3AQ9Y2H6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.82■■□□□ 1.72
FNDC3AQ9Y2H6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
FNDC3AQ9Y2H6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
FNDC3AQ9Y2H6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
FNDC3AQ9Y2H6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
FNDC3AQ9Y2H6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
FNDC3AQ9Y2H6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
FNDC3AQ9Y2H6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
FNDC3AQ9Y2H6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
FNDC3AQ9Y2H6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
FNDC3AQ9Y2H6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
FNDC3AQ9Y2H6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
FNDC3AQ9Y2H6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
FNDC3AQ9Y2H6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
FNDC3AQ9Y2H6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
FNDC3AQ9Y2H6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.8■■□□□ 1.72
FNDC3AQ9Y2H6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.79■■□□□ 1.72
FNDC3AQ9Y2H6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
FNDC3AQ9Y2H6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
FNDC3AQ9Y2H6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
FNDC3AQ9Y2H6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.78■■□□□ 1.72
FNDC3AQ9Y2H6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
FNDC3AQ9Y2H6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
FNDC3AQ9Y2H6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
FNDC3AQ9Y2H6 RARRES2P2-201ENST00000394842 485 ntBASIC25.77■■□□□ 1.72
FNDC3AQ9Y2H6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.77■■□□□ 1.72
FNDC3AQ9Y2H6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
FNDC3AQ9Y2H6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
FNDC3AQ9Y2H6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
FNDC3AQ9Y2H6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.76■■□□□ 1.71
FNDC3AQ9Y2H6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.76■■□□□ 1.71
FNDC3AQ9Y2H6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.76■■□□□ 1.71
FNDC3AQ9Y2H6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
FNDC3AQ9Y2H6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
FNDC3AQ9Y2H6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
FNDC3AQ9Y2H6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.75■■□□□ 1.71
FNDC3AQ9Y2H6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.75■■□□□ 1.71
FNDC3AQ9Y2H6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
FNDC3AQ9Y2H6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
FNDC3AQ9Y2H6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.74■■□□□ 1.71
FNDC3AQ9Y2H6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.74■■□□□ 1.71
FNDC3AQ9Y2H6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.74■■□□□ 1.71
FNDC3AQ9Y2H6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
FNDC3AQ9Y2H6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
FNDC3AQ9Y2H6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
FNDC3AQ9Y2H6 LINC00273-201ENST00000539813 1452 ntBASIC25.72■■□□□ 1.71
FNDC3AQ9Y2H6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
FNDC3AQ9Y2H6 WHAMMP2-203ENST00000563942 1603 ntBASIC25.71■■□□□ 1.71
FNDC3AQ9Y2H6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
FNDC3AQ9Y2H6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
FNDC3AQ9Y2H6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
FNDC3AQ9Y2H6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
FNDC3AQ9Y2H6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.69■■□□□ 1.7
FNDC3AQ9Y2H6 GPX1-201ENST00000419349 1106 ntBASIC25.69■■□□□ 1.7
FNDC3AQ9Y2H6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.69■■□□□ 1.7
FNDC3AQ9Y2H6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
FNDC3AQ9Y2H6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
FNDC3AQ9Y2H6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
FNDC3AQ9Y2H6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
FNDC3AQ9Y2H6 AC135983.2-203ENST00000454486 1613 ntBASIC25.68■■□□□ 1.7
FNDC3AQ9Y2H6 ABHD17AP5-201ENST00000580133 923 ntBASIC25.68■■□□□ 1.7
FNDC3AQ9Y2H6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.67■■□□□ 1.7
FNDC3AQ9Y2H6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.67■■□□□ 1.7
FNDC3AQ9Y2H6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
FNDC3AQ9Y2H6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.66■■□□□ 1.7
FNDC3AQ9Y2H6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
FNDC3AQ9Y2H6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
FNDC3AQ9Y2H6 AC100797.4-201ENST00000631653 1827 ntBASIC25.65■■□□□ 1.7
FNDC3AQ9Y2H6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
FNDC3AQ9Y2H6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
FNDC3AQ9Y2H6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
FNDC3AQ9Y2H6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
FNDC3AQ9Y2H6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
FNDC3AQ9Y2H6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
FNDC3AQ9Y2H6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
FNDC3AQ9Y2H6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
FNDC3AQ9Y2H6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.63■■□□□ 1.69
FNDC3AQ9Y2H6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
FNDC3AQ9Y2H6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
FNDC3AQ9Y2H6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
FNDC3AQ9Y2H6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
FNDC3AQ9Y2H6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.62■■□□□ 1.69
FNDC3AQ9Y2H6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
FNDC3AQ9Y2H6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.62■■□□□ 1.69
FNDC3AQ9Y2H6 AP004833.2-201ENST00000532228 1454 ntBASIC25.62■■□□□ 1.69
FNDC3AQ9Y2H6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.62■■□□□ 1.69
FNDC3AQ9Y2H6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
FNDC3AQ9Y2H6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
FNDC3AQ9Y2H6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
FNDC3AQ9Y2H6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
FNDC3AQ9Y2H6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
FNDC3AQ9Y2H6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
FNDC3AQ9Y2H6 RNF126P1-201ENST00000567452 1320 ntBASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms