Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCDHA6Q9UN73 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
PCDHA6Q9UN73 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCDHA6Q9UN73 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.34■■■□□ 2.29
PCDHA6Q9UN73 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCDHA6Q9UN73 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.34■■■□□ 2.29
PCDHA6Q9UN73 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.34■■■□□ 2.29
PCDHA6Q9UN73 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.33■■■□□ 2.29
PCDHA6Q9UN73 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC29.33■■■□□ 2.29
PCDHA6Q9UN73 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHA6Q9UN73 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
PCDHA6Q9UN73 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
PCDHA6Q9UN73 MIR639-201ENST00000384974 98 ntBASIC29.31■■■□□ 2.28
PCDHA6Q9UN73 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCDHA6Q9UN73 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCDHA6Q9UN73 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PCDHA6Q9UN73 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
PCDHA6Q9UN73 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.3■■■□□ 2.28
PCDHA6Q9UN73 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.3■■■□□ 2.28
PCDHA6Q9UN73 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.3■■■□□ 2.28
PCDHA6Q9UN73 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
PCDHA6Q9UN73 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
PCDHA6Q9UN73 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.28■■■□□ 2.28
PCDHA6Q9UN73 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
PCDHA6Q9UN73 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.27■■■□□ 2.28
PCDHA6Q9UN73 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
PCDHA6Q9UN73 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PCDHA6Q9UN73 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.26■■■□□ 2.27
PCDHA6Q9UN73 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
PCDHA6Q9UN73 DRD5P2-201ENST00000421395 2012 ntBASIC29.26■■■□□ 2.27
PCDHA6Q9UN73 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PCDHA6Q9UN73 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCDHA6Q9UN73 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
PCDHA6Q9UN73 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
PCDHA6Q9UN73 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
PCDHA6Q9UN73 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PCDHA6Q9UN73 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.23■■■□□ 2.27
PCDHA6Q9UN73 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
PCDHA6Q9UN73 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHA6Q9UN73 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHA6Q9UN73 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHA6Q9UN73 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHA6Q9UN73 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
PCDHA6Q9UN73 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.21■■■□□ 2.27
PCDHA6Q9UN73 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PCDHA6Q9UN73 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.26
PCDHA6Q9UN73 AC110285.7-201ENST00000624417 1536 ntBASIC29.2■■■□□ 2.26
PCDHA6Q9UN73 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC29.19■■■□□ 2.26
PCDHA6Q9UN73 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
PCDHA6Q9UN73 MIR4449-201ENST00000578365 66 ntBASIC29.18■■■□□ 2.26
PCDHA6Q9UN73 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PCDHA6Q9UN73 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PCDHA6Q9UN73 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
PCDHA6Q9UN73 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.17■■■□□ 2.26
PCDHA6Q9UN73 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
PCDHA6Q9UN73 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
PCDHA6Q9UN73 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
PCDHA6Q9UN73 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
PCDHA6Q9UN73 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
PCDHA6Q9UN73 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
PCDHA6Q9UN73 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
PCDHA6Q9UN73 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PCDHA6Q9UN73 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PCDHA6Q9UN73 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
PCDHA6Q9UN73 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
PCDHA6Q9UN73 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
PCDHA6Q9UN73 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.11■■■□□ 2.25
PCDHA6Q9UN73 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.11■■■□□ 2.25
PCDHA6Q9UN73 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
PCDHA6Q9UN73 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
PCDHA6Q9UN73 AP002414.2-202ENST00000590929 1450 ntBASIC29.1■■■□□ 2.25
PCDHA6Q9UN73 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
PCDHA6Q9UN73 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
PCDHA6Q9UN73 PROC-203ENST00000409048 1586 ntTSL 5 BASIC29.09■■■□□ 2.25
PCDHA6Q9UN73 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PCDHA6Q9UN73 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
PCDHA6Q9UN73 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.09■■■□□ 2.25
PCDHA6Q9UN73 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC29.08■■■□□ 2.25
PCDHA6Q9UN73 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
PCDHA6Q9UN73 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PCDHA6Q9UN73 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
PCDHA6Q9UN73 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
PCDHA6Q9UN73 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
PCDHA6Q9UN73 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.07■■■□□ 2.24
PCDHA6Q9UN73 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
PCDHA6Q9UN73 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
PCDHA6Q9UN73 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.06■■■□□ 2.24
PCDHA6Q9UN73 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC29.06■■■□□ 2.24
PCDHA6Q9UN73 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
PCDHA6Q9UN73 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
PCDHA6Q9UN73 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
PCDHA6Q9UN73 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.05■■■□□ 2.24
PCDHA6Q9UN73 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.05■■■□□ 2.24
PCDHA6Q9UN73 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
PCDHA6Q9UN73 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.04■■■□□ 2.24
PCDHA6Q9UN73 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.04■■■□□ 2.24
PCDHA6Q9UN73 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
PCDHA6Q9UN73 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
PCDHA6Q9UN73 AC142086.6-201ENST00000621154 1765 ntBASIC29.03■■■□□ 2.24
PCDHA6Q9UN73 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.03■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms