Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.01■■■□□ 2.55
UPF2Q9HAU5 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
UPF2Q9HAU5 RARRES2P7-201ENST00000567349 469 ntBASIC31■■■□□ 2.55
UPF2Q9HAU5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
UPF2Q9HAU5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
UPF2Q9HAU5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
UPF2Q9HAU5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.99■■■□□ 2.55
UPF2Q9HAU5 SETD8P1-201ENST00000623146 1180 ntBASIC30.98■■■□□ 2.55
UPF2Q9HAU5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
UPF2Q9HAU5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
UPF2Q9HAU5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.96■■■□□ 2.55
UPF2Q9HAU5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
UPF2Q9HAU5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.95■■■□□ 2.55
UPF2Q9HAU5 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
UPF2Q9HAU5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.54
UPF2Q9HAU5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
UPF2Q9HAU5 AC135731.1-201ENST00000569415 2548 ntBASIC30.92■■■□□ 2.54
UPF2Q9HAU5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
UPF2Q9HAU5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
UPF2Q9HAU5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
UPF2Q9HAU5 AP002414.2-202ENST00000590929 1450 ntBASIC30.91■■■□□ 2.54
UPF2Q9HAU5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
UPF2Q9HAU5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
UPF2Q9HAU5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
UPF2Q9HAU5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC30.9■■■□□ 2.54
UPF2Q9HAU5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
UPF2Q9HAU5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
UPF2Q9HAU5 AL449106.1-201ENST00000608517 1980 ntBASIC30.89■■■□□ 2.54
UPF2Q9HAU5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
UPF2Q9HAU5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.89■■■□□ 2.54
UPF2Q9HAU5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
UPF2Q9HAU5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
UPF2Q9HAU5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
UPF2Q9HAU5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
UPF2Q9HAU5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
UPF2Q9HAU5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
UPF2Q9HAU5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.85■■■□□ 2.53
UPF2Q9HAU5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
UPF2Q9HAU5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
UPF2Q9HAU5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
UPF2Q9HAU5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
UPF2Q9HAU5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
UPF2Q9HAU5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
UPF2Q9HAU5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.83■■■□□ 2.53
UPF2Q9HAU5 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
UPF2Q9HAU5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
UPF2Q9HAU5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
UPF2Q9HAU5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC30.82■■■□□ 2.52
UPF2Q9HAU5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.81■■■□□ 2.52
UPF2Q9HAU5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
UPF2Q9HAU5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
UPF2Q9HAU5 AL391121.1-201ENST00000607967 1349 ntBASIC30.8■■■□□ 2.52
UPF2Q9HAU5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
UPF2Q9HAU5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.8■■■□□ 2.52
UPF2Q9HAU5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
UPF2Q9HAU5 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
UPF2Q9HAU5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.8■■■□□ 2.52
UPF2Q9HAU5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
UPF2Q9HAU5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
UPF2Q9HAU5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.8■■■□□ 2.52
UPF2Q9HAU5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
UPF2Q9HAU5 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
UPF2Q9HAU5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
UPF2Q9HAU5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
UPF2Q9HAU5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
UPF2Q9HAU5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
UPF2Q9HAU5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
UPF2Q9HAU5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
UPF2Q9HAU5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
UPF2Q9HAU5 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.77■■■□□ 2.52
UPF2Q9HAU5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
UPF2Q9HAU5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.52
UPF2Q9HAU5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
UPF2Q9HAU5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
UPF2Q9HAU5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
UPF2Q9HAU5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
UPF2Q9HAU5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
UPF2Q9HAU5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
UPF2Q9HAU5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
UPF2Q9HAU5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
UPF2Q9HAU5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.73■■■□□ 2.51
UPF2Q9HAU5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
UPF2Q9HAU5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
UPF2Q9HAU5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.73■■■□□ 2.51
UPF2Q9HAU5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC30.73■■■□□ 2.51
UPF2Q9HAU5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.72■■■□□ 2.51
UPF2Q9HAU5 AC091060.1-201ENST00000623524 1766 ntBASIC30.72■■■□□ 2.51
UPF2Q9HAU5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC30.72■■■□□ 2.51
UPF2Q9HAU5 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
UPF2Q9HAU5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC30.71■■■□□ 2.51
UPF2Q9HAU5 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
UPF2Q9HAU5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.7■■■□□ 2.51
UPF2Q9HAU5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
UPF2Q9HAU5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
UPF2Q9HAU5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
UPF2Q9HAU5 AC018358.1-201ENST00000631079 1402 ntBASIC30.69■■■□□ 2.5
UPF2Q9HAU5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
UPF2Q9HAU5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
UPF2Q9HAU5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.67■■■□□ 2.5
UPF2Q9HAU5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms