Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.56■■□□□ 1.2
FREM1Q5H8C1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
FREM1Q5H8C1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.56■■□□□ 1.2
FREM1Q5H8C1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
FREM1Q5H8C1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.55■■□□□ 1.2
FREM1Q5H8C1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.55■■□□□ 1.2
FREM1Q5H8C1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
FREM1Q5H8C1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
FREM1Q5H8C1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
FREM1Q5H8C1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FREM1Q5H8C1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
FREM1Q5H8C1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.54■■□□□ 1.2
FREM1Q5H8C1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
FREM1Q5H8C1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
FREM1Q5H8C1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.54■■□□□ 1.2
FREM1Q5H8C1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.53■■□□□ 1.2
FREM1Q5H8C1 AP004833.2-201ENST00000532228 1454 ntBASIC22.53■■□□□ 1.2
FREM1Q5H8C1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.53■■□□□ 1.2
FREM1Q5H8C1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
FREM1Q5H8C1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.52■■□□□ 1.2
FREM1Q5H8C1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
FREM1Q5H8C1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FREM1Q5H8C1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
FREM1Q5H8C1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
FREM1Q5H8C1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.51■■□□□ 1.19
FREM1Q5H8C1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.51■■□□□ 1.19
FREM1Q5H8C1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FREM1Q5H8C1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
FREM1Q5H8C1 AC148477.6-201ENST00000623746 465 ntBASIC22.5■■□□□ 1.19
FREM1Q5H8C1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
FREM1Q5H8C1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
FREM1Q5H8C1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
FREM1Q5H8C1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
FREM1Q5H8C1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
FREM1Q5H8C1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
FREM1Q5H8C1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
FREM1Q5H8C1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
FREM1Q5H8C1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.47■■□□□ 1.19
FREM1Q5H8C1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
FREM1Q5H8C1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
FREM1Q5H8C1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
FREM1Q5H8C1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.46■■□□□ 1.19
FREM1Q5H8C1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
FREM1Q5H8C1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.46■■□□□ 1.19
FREM1Q5H8C1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
FREM1Q5H8C1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
FREM1Q5H8C1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.45■■□□□ 1.18
FREM1Q5H8C1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.45■■□□□ 1.18
FREM1Q5H8C1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
FREM1Q5H8C1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
FREM1Q5H8C1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.45■■□□□ 1.18
FREM1Q5H8C1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
FREM1Q5H8C1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
FREM1Q5H8C1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.44■■□□□ 1.18
FREM1Q5H8C1 AC110285.7-201ENST00000624417 1536 ntBASIC22.44■■□□□ 1.18
FREM1Q5H8C1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
FREM1Q5H8C1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.43■■□□□ 1.18
FREM1Q5H8C1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FREM1Q5H8C1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FREM1Q5H8C1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
FREM1Q5H8C1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
FREM1Q5H8C1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
FREM1Q5H8C1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
FREM1Q5H8C1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
FREM1Q5H8C1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FREM1Q5H8C1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.41■■□□□ 1.18
FREM1Q5H8C1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
FREM1Q5H8C1 DRD5P2-201ENST00000421395 2012 ntBASIC22.41■■□□□ 1.18
FREM1Q5H8C1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
FREM1Q5H8C1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
FREM1Q5H8C1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.4■■□□□ 1.18
FREM1Q5H8C1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.4■■□□□ 1.18
FREM1Q5H8C1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.4■■□□□ 1.18
FREM1Q5H8C1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
FREM1Q5H8C1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
FREM1Q5H8C1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
FREM1Q5H8C1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
FREM1Q5H8C1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.39■■□□□ 1.17
FREM1Q5H8C1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FREM1Q5H8C1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
FREM1Q5H8C1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
FREM1Q5H8C1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
FREM1Q5H8C1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
FREM1Q5H8C1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
FREM1Q5H8C1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
FREM1Q5H8C1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
FREM1Q5H8C1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.35■■□□□ 1.17
FREM1Q5H8C1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.35■■□□□ 1.17
FREM1Q5H8C1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FREM1Q5H8C1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.35■■□□□ 1.17
FREM1Q5H8C1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
FREM1Q5H8C1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FREM1Q5H8C1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.34■■□□□ 1.17
FREM1Q5H8C1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.34■■□□□ 1.17
FREM1Q5H8C1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FREM1Q5H8C1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FREM1Q5H8C1 AP002414.2-202ENST00000590929 1450 ntBASIC22.33■■□□□ 1.17
FREM1Q5H8C1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
FREM1Q5H8C1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
FREM1Q5H8C1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms