Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDC34P49427 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDC34P49427 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.92■□□□□ 0.78
CDC34P49427 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.91■□□□□ 0.78
CDC34P49427 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC34P49427 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDC34P49427 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC34P49427 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC34P49427 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDC34P49427 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC34P49427 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDC34P49427 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC34P49427 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.9■□□□□ 0.78
CDC34P49427 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CDC34P49427 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC34P49427 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC34P49427 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC34P49427 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.9■□□□□ 0.78
CDC34P49427 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDC34P49427 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.89■□□□□ 0.77
CDC34P49427 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.88■□□□□ 0.77
CDC34P49427 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.88■□□□□ 0.77
CDC34P49427 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDC34P49427 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC34P49427 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDC34P49427 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC34P49427 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC34P49427 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC34P49427 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CDC34P49427 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.87■□□□□ 0.77
CDC34P49427 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC34P49427 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC34P49427 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.86■□□□□ 0.77
CDC34P49427 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC34P49427 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC34P49427 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC34P49427 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC34P49427 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.84■□□□□ 0.77
CDC34P49427 AL133380.1-201ENST00000506013 324 ntBASIC19.84■□□□□ 0.77
CDC34P49427 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDC34P49427 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC34P49427 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDC34P49427 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDC34P49427 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.83■□□□□ 0.76
CDC34P49427 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CDC34P49427 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.83■□□□□ 0.76
CDC34P49427 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CDC34P49427 AC127502.1-201ENST00000399971 1502 ntBASIC19.82■□□□□ 0.76
CDC34P49427 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDC34P49427 AC145676.1-201ENST00000514988 2004 ntBASIC19.82■□□□□ 0.76
CDC34P49427 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDC34P49427 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC34P49427 AC020928.2-201ENST00000588717 2197 ntBASIC19.81■□□□□ 0.76
CDC34P49427 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CDC34P49427 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.81■□□□□ 0.76
CDC34P49427 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC34P49427 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDC34P49427 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDC34P49427 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC34P49427 AC100797.4-201ENST00000631653 1827 ntBASIC19.81■□□□□ 0.76
CDC34P49427 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.81■□□□□ 0.76
CDC34P49427 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.8■□□□□ 0.76
CDC34P49427 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CDC34P49427 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC34P49427 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CDC34P49427 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CDC34P49427 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CDC34P49427 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.77■□□□□ 0.76
CDC34P49427 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC34P49427 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
CDC34P49427 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CDC34P49427 AP002414.2-202ENST00000590929 1450 ntBASIC19.77■□□□□ 0.76
CDC34P49427 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC34P49427 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDC34P49427 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC34P49427 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC34P49427 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDC34P49427 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDC34P49427 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC34P49427 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC34P49427 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC34P49427 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CDC34P49427 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDC34P49427 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC34P49427 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC34P49427 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC34P49427 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDC34P49427 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDC34P49427 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.74■□□□□ 0.75
CDC34P49427 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC34P49427 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.74■□□□□ 0.75
CDC34P49427 AP002365.1-201ENST00000603448 772 ntBASIC19.74■□□□□ 0.75
CDC34P49427 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDC34P49427 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC34P49427 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC34P49427 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.73■□□□□ 0.75
CDC34P49427 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDC34P49427 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC34P49427 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC34P49427 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms