Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
GDF1P27539 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
GDF1P27539 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.13■■□□□ 1.29
GDF1P27539 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
GDF1P27539 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.13■■□□□ 1.29
GDF1P27539 AC100797.4-201ENST00000631653 1827 ntBASIC23.12■■□□□ 1.29
GDF1P27539 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
GDF1P27539 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
GDF1P27539 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
GDF1P27539 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
GDF1P27539 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
GDF1P27539 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
GDF1P27539 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
GDF1P27539 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
GDF1P27539 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.11■■□□□ 1.29
GDF1P27539 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
GDF1P27539 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
GDF1P27539 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
GDF1P27539 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
GDF1P27539 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
GDF1P27539 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.1■■□□□ 1.29
GDF1P27539 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.1■■□□□ 1.29
GDF1P27539 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
GDF1P27539 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
GDF1P27539 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
GDF1P27539 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
GDF1P27539 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
GDF1P27539 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.08■■□□□ 1.28
GDF1P27539 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
GDF1P27539 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
GDF1P27539 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.07■■□□□ 1.28
GDF1P27539 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.07■■□□□ 1.28
GDF1P27539 ABCB10P3-201ENST00000561950 2166 ntBASIC23.06■■□□□ 1.28
GDF1P27539 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
GDF1P27539 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.06■■□□□ 1.28
GDF1P27539 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
GDF1P27539 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
GDF1P27539 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
GDF1P27539 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
GDF1P27539 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.05■■□□□ 1.28
GDF1P27539 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.05■■□□□ 1.28
GDF1P27539 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
GDF1P27539 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
GDF1P27539 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
GDF1P27539 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
GDF1P27539 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
GDF1P27539 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
GDF1P27539 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.04■■□□□ 1.28
GDF1P27539 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
GDF1P27539 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
GDF1P27539 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
GDF1P27539 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
GDF1P27539 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
GDF1P27539 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.02■■□□□ 1.28
GDF1P27539 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.02■■□□□ 1.28
GDF1P27539 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
GDF1P27539 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
GDF1P27539 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
GDF1P27539 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
GDF1P27539 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.01■■□□□ 1.27
GDF1P27539 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.01■■□□□ 1.27
GDF1P27539 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.01■■□□□ 1.27
GDF1P27539 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
GDF1P27539 HSD17B1P1-201ENST00000590052 955 ntBASIC23.01■■□□□ 1.27
GDF1P27539 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23■■□□□ 1.27
GDF1P27539 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23■■□□□ 1.27
GDF1P27539 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23■■□□□ 1.27
GDF1P27539 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23■■□□□ 1.27
GDF1P27539 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.99■■□□□ 1.27
GDF1P27539 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
GDF1P27539 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
GDF1P27539 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
GDF1P27539 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
GDF1P27539 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
GDF1P27539 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.98■■□□□ 1.27
GDF1P27539 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
GDF1P27539 AC148477.6-201ENST00000623746 465 ntBASIC22.98■■□□□ 1.27
GDF1P27539 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
GDF1P27539 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
GDF1P27539 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
GDF1P27539 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
GDF1P27539 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
GDF1P27539 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
GDF1P27539 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
GDF1P27539 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
GDF1P27539 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
GDF1P27539 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.96■■□□□ 1.27
GDF1P27539 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
GDF1P27539 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.95■■□□□ 1.26
GDF1P27539 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.95■■□□□ 1.26
GDF1P27539 MIR219A2-201ENST00000608502 1504 ntBASIC22.95■■□□□ 1.26
GDF1P27539 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
GDF1P27539 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
GDF1P27539 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.94■■□□□ 1.26
GDF1P27539 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.94■■□□□ 1.26
GDF1P27539 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
GDF1P27539 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.93■■□□□ 1.26
GDF1P27539 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
GDF1P27539 GPX1-201ENST00000419349 1106 ntBASIC22.92■■□□□ 1.26
GDF1P27539 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms