Protein–RNA interactions for Protein: P27482

CALML3, Calmodulin-like protein 3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALML3P27482 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.55■■■□□ 2.32
CALML3P27482 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.55■■■□□ 2.32
CALML3P27482 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
CALML3P27482 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CALML3P27482 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CALML3P27482 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
CALML3P27482 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CALML3P27482 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CALML3P27482 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CALML3P27482 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.53■■■□□ 2.32
CALML3P27482 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CALML3P27482 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CALML3P27482 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
CALML3P27482 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.52■■■□□ 2.32
CALML3P27482 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.52■■■□□ 2.32
CALML3P27482 HSD17B1P1-201ENST00000590052 955 ntBASIC29.52■■■□□ 2.32
CALML3P27482 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CALML3P27482 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.5■■■□□ 2.31
CALML3P27482 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CALML3P27482 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
CALML3P27482 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CALML3P27482 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.49■■■□□ 2.31
CALML3P27482 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.49■■■□□ 2.31
CALML3P27482 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CALML3P27482 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.49■■■□□ 2.31
CALML3P27482 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CALML3P27482 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.48■■■□□ 2.31
CALML3P27482 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.47■■■□□ 2.31
CALML3P27482 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.47■■■□□ 2.31
CALML3P27482 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.47■■■□□ 2.31
CALML3P27482 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
CALML3P27482 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.47■■■□□ 2.31
CALML3P27482 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.47■■■□□ 2.31
CALML3P27482 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CALML3P27482 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CALML3P27482 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.46■■■□□ 2.31
CALML3P27482 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CALML3P27482 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.45■■■□□ 2.31
CALML3P27482 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.45■■■□□ 2.31
CALML3P27482 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
CALML3P27482 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CALML3P27482 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CALML3P27482 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CALML3P27482 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CALML3P27482 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CALML3P27482 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CALML3P27482 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CALML3P27482 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CALML3P27482 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.44■■■□□ 2.3
CALML3P27482 AC100797.4-201ENST00000631653 1827 ntBASIC29.43■■■□□ 2.3
CALML3P27482 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CALML3P27482 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.43■■■□□ 2.3
CALML3P27482 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CALML3P27482 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.43■■■□□ 2.3
CALML3P27482 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.43■■■□□ 2.3
CALML3P27482 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
CALML3P27482 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CALML3P27482 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.42■■■□□ 2.3
CALML3P27482 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CALML3P27482 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CALML3P27482 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CALML3P27482 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CALML3P27482 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
CALML3P27482 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
CALML3P27482 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CALML3P27482 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
CALML3P27482 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.4■■■□□ 2.3
CALML3P27482 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
CALML3P27482 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
CALML3P27482 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
CALML3P27482 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
CALML3P27482 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CALML3P27482 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
CALML3P27482 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.38■■■□□ 2.29
CALML3P27482 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CALML3P27482 DRD5P2-201ENST00000421395 2012 ntBASIC29.37■■■□□ 2.29
CALML3P27482 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CALML3P27482 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.36■■■□□ 2.29
CALML3P27482 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC29.36■■■□□ 2.29
CALML3P27482 AC110285.7-201ENST00000624417 1536 ntBASIC29.35■■■□□ 2.29
CALML3P27482 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
CALML3P27482 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.35■■■□□ 2.29
CALML3P27482 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CALML3P27482 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CALML3P27482 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.34■■■□□ 2.29
CALML3P27482 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
CALML3P27482 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.34■■■□□ 2.29
CALML3P27482 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CALML3P27482 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CALML3P27482 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CALML3P27482 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.32■■■□□ 2.28
CALML3P27482 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.32■■■□□ 2.28
CALML3P27482 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CALML3P27482 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CALML3P27482 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CALML3P27482 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CALML3P27482 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
CALML3P27482 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CALML3P27482 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
CALML3P27482 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms