Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 KRT18P60-201ENST00000312876 1297 ntBASIC25.44■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.44■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.44■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 AC092296.2-201ENST00000589470 999 ntBASIC25.44■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.43■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.43■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 TSPY13P-201ENST00000338964 914 ntBASIC25.42■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.41■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 AC004987.1-201ENST00000428627 508 ntBASIC25.41■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.4■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 ATP5G2P3-201ENST00000429083 425 ntBASIC25.39■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 ECEL1P2-201ENST00000461596 1295 ntBASIC25.38■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.38■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.37■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.36■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.35■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.34■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.33■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.33■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.33■■□□□ 1.65
MSANTD3-TMEFF1A0A0A6YYJ0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 AC126177.7-201ENST00000547904 679 ntBASIC25.32■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.32■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.32■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.31■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.31■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.3■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.3■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.3■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.29■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 RARRES2P1-201ENST00000474487 481 ntBASIC25.29■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.29■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.27■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.27■■□□□ 1.64
MSANTD3-TMEFF1A0A0A6YYJ0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.26■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.26■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.26■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.25■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.24■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 AL157400.5-201ENST00000507624 621 ntBASIC25.24■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
MSANTD3-TMEFF1A0A0A6YYJ0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms