Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.61■□□□□ 0.739e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.61■□□□□ 0.739e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.739e-6■□□□□ 9.4
EXOSC5Q9NQT4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.659e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-213ENST00000626793 733 ntTSL 518.41■□□□□ 0.549e-6■□□□□ 9.4
EXOSC5Q9NQT4 IDI1-203ENST00000429642 1017 ntTSL 518.19■□□□□ 0.59e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.04■□□□□ 0.489e-6■□□□□ 9.4
EXOSC5Q9NQT4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.429e-6■□□□□ 9.4
EXOSC5Q9NQT4 IDI1-205ENST00000491735 1066 ntTSL 1 (best)16.62■□□□□ 0.259e-6■□□□□ 9.4
EXOSC5Q9NQT4 KLHDC4-207ENST00000562155 1757 ntTSL 516.6■□□□□ 0.259e-6■□□□□ 9.4
EXOSC5Q9NQT4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.239e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-218ENST00000629252 1112 ntTSL 516.39■□□□□ 0.219e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-215ENST00000628267 779 ntTSL 516.25■□□□□ 0.199e-6■□□□□ 9.4
EXOSC5Q9NQT4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.15■□□□□ 0.189e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.179e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.49■□□□□ 0.079e-6■□□□□ 9.4
EXOSC5Q9NQT4 KLHDC4-217ENST00000566661 2232 ntTSL 515.35■□□□□ 0.059e-6■□□□□ 9.4
EXOSC5Q9NQT4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.95□□□□□ -0.029e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.77□□□□□ -0.059e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.069e-6■□□□□ 9.4
EXOSC5Q9NQT4 KLHDC4-202ENST00000316853 1287 ntTSL 1 (best)14.37□□□□□ -0.119e-6■□□□□ 9.4
EXOSC5Q9NQT4 KLHDC4-215ENST00000566349 1377 ntTSL 214.3□□□□□ -0.129e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.149e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.199e-6■□□□□ 9.4
EXOSC5Q9NQT4 KLHDC4-218ENST00000567298 4572 ntTSL 513.67□□□□□ -0.229e-6■□□□□ 9.4
EXOSC5Q9NQT4 PRPF40A-212ENST00000545856 1358 ntTSL 1 (best)13.46□□□□□ -0.259e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.329e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.93□□□□□ -0.349e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.349e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.439e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.28□□□□□ -0.449e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.469e-6■□□□□ 9.4
EXOSC5Q9NQT4 KLHDC4-208ENST00000562261 1065 ntTSL 312.03□□□□□ -0.489e-6■□□□□ 9.4
EXOSC5Q9NQT4 IDI1-204ENST00000482091 1029 ntTSL 511.91□□□□□ -0.59e-6■□□□□ 9.4
EXOSC5Q9NQT4 PRPF40A-211ENST00000493468 1043 ntTSL 1 (best)11.87□□□□□ -0.519e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)11.5□□□□□ -0.579e-6■□□□□ 9.4
EXOSC5Q9NQT4 KLHDC4-212ENST00000564396 563 ntTSL 511.37□□□□□ -0.599e-6■□□□□ 9.4
EXOSC5Q9NQT4 PRPF40A-201ENST00000354363 1622 ntTSL 211.36□□□□□ -0.599e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-221ENST00000520265 336 ntTSL 511.15□□□□□ -0.629e-6■□□□□ 9.4
EXOSC5Q9NQT4 KLHDC4-214ENST00000565328 582 ntTSL 411.12□□□□□ -0.639e-6■□□□□ 9.4
EXOSC5Q9NQT4 WASL-201ENST00000223023 4435 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.659e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC10.94□□□□□ -0.669e-6■□□□□ 9.4
EXOSC5Q9NQT4 KLHDC4-226ENST00000569747 560 ntTSL 410.62□□□□□ -0.719e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC10.48□□□□□ -0.739e-6■□□□□ 9.4
EXOSC5Q9NQT4 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.749e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC10.34□□□□□ -0.759e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.799e-6■□□□□ 9.4
EXOSC5Q9NQT4 PRPF40A-203ENST00000448428 490 ntTSL 510.04□□□□□ -0.89e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC9.59□□□□□ -0.879e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC9.59□□□□□ -0.879e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.879e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)8.84□□□□□ -0.999e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-221ENST00000630607 1873 ntTSL 38.55□□□□□ -1.049e-6■□□□□ 9.4
EXOSC5Q9NQT4 KLHDC4-213ENST00000564484 562 ntTSL 58.45□□□□□ -1.069e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-214ENST00000493786 551 ntTSL 26.25□□□□□ -1.419e-6■□□□□ 9.4
EXOSC5Q9NQT4 KLHDC4-219ENST00000567513 585 ntTSL 46.23□□□□□ -1.419e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.589e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.659e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-219ENST00000629886 436 ntTSL 34.61□□□□□ -1.679e-6■□□□□ 9.4
EXOSC5Q9NQT4 PRPF40A-205ENST00000467114 546 ntTSL 44.09□□□□□ -1.759e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-217ENST00000628890 424 ntTSL 33.75□□□□□ -1.819e-6■□□□□ 9.4
EXOSC5Q9NQT4 CUL3-205ENST00000432260 587 ntTSL 33.65□□□□□ -1.839e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.5□□□□□ -1.859e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-210ENST00000626068 772 ntTSL 23.06□□□□□ -1.929e-6■□□□□ 9.4
EXOSC5Q9NQT4 CUL3-214ENST00000541548 535 ntTSL 42.97□□□□□ -1.939e-6■□□□□ 9.4
EXOSC5Q9NQT4 CUL3-206ENST00000436172 576 ntTSL 42.16□□□□□ -2.069e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-216ENST00000628733 706 ntTSL 51.52□□□□□ -2.179e-6■□□□□ 9.4
EXOSC5Q9NQT4 CYP11B2-201ENST00000323110 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.799e-6■□□□□ 9.4
EXOSC5Q9NQT4 RBM14-207ENST00000461478 693 ntTSL 216.52■□□□□ 0.242e-8■□□□□ 9.4
EXOSC5Q9NQT4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.93□□□□□ -0.182e-8■□□□□ 9.4
EXOSC5Q9NQT4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.212e-8■□□□□ 9.4
EXOSC5Q9NQT4 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC10.86□□□□□ -0.672e-8■□□□□ 9.4
EXOSC5Q9NQT4 RBM14-205ENST00000443702 732 ntTSL 3 BASIC10.36□□□□□ -0.752e-8■□□□□ 9.4
EXOSC5Q9NQT4 RBM14-RBM4-204ENST00000511114 523 ntTSL 49.92□□□□□ -0.822e-8■□□□□ 9.4
EXOSC5Q9NQT4 RBM14-203ENST00000409372 876 ntTSL 2 BASIC9.6□□□□□ -0.872e-8■□□□□ 9.4
EXOSC5Q9NQT4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.579e-6■□□□□ 9.4
EXOSC5Q9NQT4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.394e-6■□□□□ 9.4
EXOSC5Q9NQT4 DDX3Y-202ENST00000360160 2709 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.084e-6■□□□□ 9.4
EXOSC5Q9NQT4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.564e-6■□□□□ 9.4
EXOSC5Q9NQT4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.37□□□□□ -1.714e-6■□□□□ 9.4
EXOSC5Q9NQT4 DDX3Y-204ENST00000454054 1049 ntTSL 34.36□□□□□ -1.714e-6■□□□□ 9.4
EXOSC5Q9NQT4 FTX-218ENST00000641360 3897 nt4.35□□□□□ -1.714e-6■□□□□ 9.4
EXOSC5Q9NQT4 DDX3Y-208ENST00000493363 528 ntTSL 22.03□□□□□ -2.084e-6■□□□□ 9.4
EXOSC5Q9NQT4 XPO1-211ENST00000451765 643 ntTSL 313.18□□□□□ -0.35e-13■□□□□ 9.4
EXOSC5Q9NQT4 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.455e-13■□□□□ 9.4
EXOSC5Q9NQT4 RB1CC1-206ENST00000518710 711 ntTSL 321.05■□□□□ 0.961e-7■□□□□ 9.3
EXOSC5Q9NQT4 RB1CC1-208ENST00000521611 528 ntTSL 518.31■□□□□ 0.521e-7■□□□□ 9.3
EXOSC5Q9NQT4 RB1CC1-204ENST00000518211 891 ntTSL 514.81□□□□□ -0.041e-7■□□□□ 9.3
EXOSC5Q9NQT4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.041e-7■□□□□ 9.3
EXOSC5Q9NQT4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.111e-7■□□□□ 9.3
EXOSC5Q9NQT4 RB1CC1-203ENST00000517963 551 ntTSL 413.84□□□□□ -0.191e-7■□□□□ 9.3
EXOSC5Q9NQT4 RB1CC1-205ENST00000518468 507 ntTSL 34.1□□□□□ -1.751e-7■□□□□ 9.3
EXOSC5Q9NQT4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.35□□□□□ -0.275e-7■□□□□ 9.3
EXOSC5Q9NQT4 MOB1B-203ENST00000502869 760 ntTSL 312.94□□□□□ -0.345e-7■□□□□ 9.3
EXOSC5Q9NQT4 MOB1B-204ENST00000509041 2056 ntTSL 29.68□□□□□ -0.865e-7■□□□□ 9.3
EXOSC5Q9NQT4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.575e-7■□□□□ 9.3
EXOSC5Q9NQT4 UGCG-203ENST00000489355 526 ntTSL 214.8□□□□□ -0.042e-7■□□□□ 9.2
EXOSC5Q9NQT4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.052e-7■□□□□ 9.2
EXOSC5Q9NQT4 UGCG-204ENST00000490110 581 ntTSL 37.71□□□□□ -1.182e-7■□□□□ 9.2
EXOSC5Q9NQT4 XPO1-210ENST00000449444 579 ntTSL 43.63□□□□□ -1.831e-12■□□□□ 9.2
Retrieved 100 of 8,799 protein–RNA pairs in 95.8 ms