RNA–Protein interactions for RNA: ENST00000637886.1

UBE3A-226, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,725 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-226ENST00000637886 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
UBE3A-226ENST00000637886 PELP1Q8IZL8 1130 aaKnown RBP21.2■□□□□ 0.98
UBE3A-226ENST00000637886 FAM9AQ8IZU1 332 aaPredicted RBP20.76■□□□□ 0.91
UBE3A-226ENST00000637886 APLP2Q06481 763 aa20.35■□□□□ 0.85
UBE3A-226ENST00000637886 ERICH6Q7L0X2 663 aa20.25■□□□□ 0.83
UBE3A-226ENST00000637886 CCER1Q8TC90 406 aaPredicted RBP20.24■□□□□ 0.83
UBE3A-226ENST00000637886 SUPT5HO00267 1087 aaKnown RBP20■□□□□ 0.79
UBE3A-226ENST00000637886 EHMT2Q96KQ7 1210 aa19.99■□□□□ 0.79
UBE3A-226ENST00000637886 ATP1B4Q9UN42 357 aaPredicted RBP19.53■□□□□ 0.72
UBE3A-226ENST00000637886 NEFLP07196 543 aa19.49■□□□□ 0.71
UBE3A-226ENST00000637886 DAXXQ9UER7 740 aaPredicted RBP19.49■□□□□ 0.71
UBE3A-226ENST00000637886 CENPBP07199 599 aaPredicted RBP19.42■□□□□ 0.7
UBE3A-226ENST00000637886 YTHDC1Q96MU7 727 aaKnown RBP19.42■□□□□ 0.7
UBE3A-226ENST00000637886 SHROOM4Q9ULL8 1493 aa19.36■□□□□ 0.69
UBE3A-226ENST00000637886 TTBK1Q5TCY1 1321 aaPredicted RBP19.36■□□□□ 0.69
UBE3A-226ENST00000637886 MYT1LQ9UL68 1186 aa19.32■□□□□ 0.68
UBE3A-226ENST00000637886 RANGAP1P46060 587 aaPredicted RBP19.26■□□□□ 0.67
UBE3A-226ENST00000637886 MYT1Q01538 1121 aa19.23■□□□□ 0.67
UBE3A-226ENST00000637886 PCGF6Q9BYE7 350 aa19.12■□□□□ 0.65
UBE3A-226ENST00000637886 ZEB1P37275 1124 aaPredicted RBP18.97■□□□□ 0.63
UBE3A-226ENST00000637886 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
UBE3A-226ENST00000637886 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
UBE3A-226ENST00000637886 ZNF316A6NFI3 1004 aaPredicted RBP18.87■□□□□ 0.61
UBE3A-226ENST00000637886 POLR3GLQ9BT43 218 aa18.86■□□□□ 0.61
UBE3A-226ENST00000637886 UBTFP17480 764 aaKnown RBP18.85■□□□□ 0.61
UBE3A-226ENST00000637886 NISCHQ9Y2I1 1504 aa18.85■□□□□ 0.61
UBE3A-226ENST00000637886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.81■□□□□ 0.6
UBE3A-226ENST00000637886 HNRNPUL2Q1KMD3 747 aaKnown RBP18.81■□□□□ 0.6
UBE3A-226ENST00000637886 CLSPNQ9HAW4 1339 aa18.78■□□□□ 0.6
UBE3A-226ENST00000637886 ZBTB47Q9UFB7 747 aaPredicted RBP18.67■□□□□ 0.58
UBE3A-226ENST00000637886 TRIM41Q8WV44 630 aa18.62■□□□□ 0.57
UBE3A-226ENST00000637886 RTL5Q5HYW3 569 aaPredicted RBP18.6■□□□□ 0.57
UBE3A-226ENST00000637886 SLC24A1O60721 1099 aa18.55■□□□□ 0.56
UBE3A-226ENST00000637886 CNGB1Q14028 1251 aaPredicted RBP18.47■□□□□ 0.55
UBE3A-226ENST00000637886 ITGAEP38570 1179 aa18.34■□□□□ 0.53
UBE3A-226ENST00000637886 NEFMP07197 916 aa18.32■□□□□ 0.52
UBE3A-226ENST00000637886 BCANQ96GW7 911 aa18.31■□□□□ 0.52
UBE3A-226ENST00000637886 CANXP27824 592 aaKnown RBP18.17■□□□□ 0.5
UBE3A-226ENST00000637886 BCL11AQ9H165 835 aa18.17■□□□□ 0.5
UBE3A-226ENST00000637886 CDK11BP21127 795 aaKnown RBP18.16■□□□□ 0.5
UBE3A-226ENST00000637886 CDK11AQ9UQ88 783 aaPredicted RBP18.16■□□□□ 0.5
UBE3A-226ENST00000637886 ANP32BQ92688 251 aaKnown RBP18.08■□□□□ 0.48
UBE3A-226ENST00000637886 ESF1Q9H501 851 aaKnown RBP18.01■□□□□ 0.47
UBE3A-226ENST00000637886 PPARGC1BQ86YN6 1023 aaKnown RBP17.99■□□□□ 0.47
UBE3A-226ENST00000637886 TRIM52Q96A61 297 aa17.94■□□□□ 0.46
UBE3A-226ENST00000637886 HSP90AA1P07900 732 aaKnown RBP17.9■□□□□ 0.46
UBE3A-226ENST00000637886 FAM50AQ14320 339 aaKnown RBP17.85■□□□□ 0.45
UBE3A-226ENST00000637886 ZNF326Q5BKZ1 582 aaKnown RBP17.81■□□□□ 0.44
UBE3A-226ENST00000637886 TRIM26Q12899 539 aaPredicted RBP17.79■□□□□ 0.44
UBE3A-226ENST00000637886 STAG3Q9UJ98 1225 aa17.76■□□□□ 0.43
UBE3A-226ENST00000637886 NPM2Q86SE8 214 aaKnown RBP17.74■□□□□ 0.43
UBE3A-226ENST00000637886 A0A0G2JS52 829 aa17.72■□□□□ 0.43
UBE3A-226ENST00000637886 UPF2Q9HAU5 1272 aaKnown RBP17.71■□□□□ 0.43
UBE3A-226ENST00000637886 FBLN2P98095 1184 aa17.7■□□□□ 0.42
UBE3A-226ENST00000637886 PLPPR3Q6T4P5 718 aa17.7■□□□□ 0.42
UBE3A-226ENST00000637886 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
UBE3A-226ENST00000637886 ANP32CO43423 234 aa17.69■□□□□ 0.42
UBE3A-226ENST00000637886 ANP32AP39687 249 aaKnown RBP17.68■□□□□ 0.42
UBE3A-226ENST00000637886 GLIPR1L2Q4G1C9 344 aa17.67■□□□□ 0.42
UBE3A-226ENST00000637886 NEUROD1Q13562 356 aa17.63■□□□□ 0.41
UBE3A-226ENST00000637886 HRCP23327 699 aa17.52■□□□□ 0.4
UBE3A-226ENST00000637886 TULP1O00294 542 aaPredicted RBP17.49■□□□□ 0.39
UBE3A-226ENST00000637886 EIF5BO60841 1220 aaKnown RBP17.49■□□□□ 0.39
UBE3A-226ENST00000637886 DIEXFQ68CQ4 756 aaKnown RBP17.47■□□□□ 0.39
UBE3A-226ENST00000637886 NPM1P06748 294 aaKnown RBP eCLIP17.44■□□□□ 0.38
UBE3A-226ENST00000637886 MYH16Q9H6N6 1097 aa17.44■□□□□ 0.38
UBE3A-226ENST00000637886 CHGAP10645 457 aaKnown RBP17.42■□□□□ 0.38
UBE3A-226ENST00000637886 ZRSR1Q15695 479 aaKnown RBP17.4■□□□□ 0.38
UBE3A-226ENST00000637886 HAP1P54257 671 aaPredicted RBP17.39■□□□□ 0.37
UBE3A-226ENST00000637886 NCBP3Q53F19 620 aaKnown RBP17.39■□□□□ 0.37
UBE3A-226ENST00000637886 NPHP1O15259 732 aa17.39■□□□□ 0.37
UBE3A-226ENST00000637886 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.34■□□□□ 0.37
UBE3A-226ENST00000637886 C14orf37Q86TY3 774 aa17.33■□□□□ 0.36
UBE3A-226ENST00000637886 NCLP19338 710 aaKnown RBP17.32■□□□□ 0.36
UBE3A-226ENST00000637886 ZNF777Q9ULD5 760 aaPredicted RBP17.29■□□□□ 0.36
UBE3A-226ENST00000637886 TRIM44Q96DX7 344 aaPredicted RBP17.29■□□□□ 0.36
UBE3A-226ENST00000637886 ZBTB7CA1YPR0 619 aa17.27■□□□□ 0.36
UBE3A-226ENST00000637886 TNNT2P45379 298 aaPredicted RBP17.26■□□□□ 0.35
UBE3A-226ENST00000637886 ARXQ96QS3 562 aa17.25■□□□□ 0.35
UBE3A-226ENST00000637886 CLSTN1O94985 981 aa17.22■□□□□ 0.35
UBE3A-226ENST00000637886 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
UBE3A-226ENST00000637886 PRM3Q9NNZ6 103 aa17.16■□□□□ 0.34
UBE3A-226ENST00000637886 WDR43Q15061 677 aaKnown RBP eCLIP17.16■□□□□ 0.341e-6■□□□□ 10.7
UBE3A-226ENST00000637886 CASC1Q6TDU7 716 aa17.15■□□□□ 0.34
UBE3A-226ENST00000637886 GOLGA2Q08379 1002 aa17.14■□□□□ 0.33
UBE3A-226ENST00000637886 ARID3CA6NKF2 412 aa17.14■□□□□ 0.33
UBE3A-226ENST00000637886 KRI1Q8N9T8 703 aaKnown RBP17.13■□□□□ 0.33
UBE3A-226ENST00000637886 GOLGA6L22H0YM25 854 aa17.12■□□□□ 0.33
UBE3A-226ENST00000637886 GOLGA6L6A8MZA4 724 aa17.12■□□□□ 0.33
UBE3A-226ENST00000637886 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
UBE3A-226ENST00000637886 ANP32EQ9BTT0 268 aa17.06■□□□□ 0.32
UBE3A-226ENST00000637886 PTMAP06454 111 aaKnown RBP17.04■□□□□ 0.32
UBE3A-226ENST00000637886 BECN1Q14457 450 aa17.04■□□□□ 0.32
UBE3A-226ENST00000637886 L1TD1Q5T7N2 865 aaKnown RBP17.03■□□□□ 0.32
UBE3A-226ENST00000637886 DNTTIP2Q5QJE6 756 aaKnown RBP17.02■□□□□ 0.32
UBE3A-226ENST00000637886 NRDCO43847 1150 aa17.01■□□□□ 0.31
UBE3A-226ENST00000637886 TMC1Q8TDI8 760 aa17■□□□□ 0.31
UBE3A-226ENST00000637886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.98■□□□□ 0.319e-8■■■□□ 14.6
UBE3A-226ENST00000637886 TONSLQ96HA7 1378 aa16.98■□□□□ 0.31
UBE3A-226ENST00000637886 ARID4BQ4LE39 1312 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms