RNA–Protein interactions for RNA: ENST00000232165.7

UBE3A-201, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-201ENST00000232165 DCAF8L2P0C7V8 631 aa30.73■■■□□ 2.51
UBE3A-201ENST00000232165 NISCHQ9Y2I1 1504 aa30.55■■■□□ 2.48
UBE3A-201ENST00000232165 SUPT5HO00267 1087 aaKnown RBP29.33■■■□□ 2.29
UBE3A-201ENST00000232165 SHROOM4Q9ULL8 1493 aa28.9■■■□□ 2.22
UBE3A-201ENST00000232165 EHMT2Q96KQ7 1210 aa27.94■■■□□ 2.06
UBE3A-201ENST00000232165 APLP2Q06481 763 aa27.82■■■□□ 2.04
UBE3A-201ENST00000232165 FAM9AQ8IZU1 332 aaPredicted RBP27.54■■■□□ 2
UBE3A-201ENST00000232165 PELP1Q8IZL8 1130 aaKnown RBP27.42■■□□□ 1.98
UBE3A-201ENST00000232165 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
UBE3A-201ENST00000232165 PCGF6Q9BYE7 350 aa27.27■■□□□ 1.96
UBE3A-201ENST00000232165 ZEB1P37275 1124 aaPredicted RBP27.11■■□□□ 1.93
UBE3A-201ENST00000232165 TTBK1Q5TCY1 1321 aaPredicted RBP27.04■■□□□ 1.92
UBE3A-201ENST00000232165 UBTFP17480 764 aaKnown RBP26.89■■□□□ 1.9
UBE3A-201ENST00000232165 RANGAP1P46060 587 aaPredicted RBP26.86■■□□□ 1.89
UBE3A-201ENST00000232165 CCER1Q8TC90 406 aaPredicted RBP26.82■■□□□ 1.88
UBE3A-201ENST00000232165 CENPBP07199 599 aaPredicted RBP26.7■■□□□ 1.86
UBE3A-201ENST00000232165 ATP1B4Q9UN42 357 aaPredicted RBP26.68■■□□□ 1.86
UBE3A-201ENST00000232165 TRIM26Q12899 539 aaPredicted RBP26.43■■□□□ 1.82
UBE3A-201ENST00000232165 CHIC1Q5VXU3 224 aa26.36■■□□□ 1.81
UBE3A-201ENST00000232165 MYT1Q01538 1121 aa26.34■■□□□ 1.81
UBE3A-201ENST00000232165 PPARGC1BQ86YN6 1023 aaKnown RBP26.18■■□□□ 1.78
UBE3A-201ENST00000232165 LOC105371045A0A1W2PR82 267 aa26.08■■□□□ 1.77
UBE3A-201ENST00000232165 NEFLP07196 543 aa26.07■■□□□ 1.76
UBE3A-201ENST00000232165 ERICH6Q7L0X2 663 aa26.05■■□□□ 1.76
UBE3A-201ENST00000232165 HRCP23327 699 aa26.05■■□□□ 1.76
UBE3A-201ENST00000232165 ABCC9O60706 1549 aa25.96■■□□□ 1.75
UBE3A-201ENST00000232165 YTHDC1Q96MU7 727 aaKnown RBP25.91■■□□□ 1.74
UBE3A-201ENST00000232165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.83■■□□□ 1.73
UBE3A-201ENST00000232165 ITGAEP38570 1179 aa25.83■■□□□ 1.73
UBE3A-201ENST00000232165 HNRNPUL2Q1KMD3 747 aaKnown RBP25.83■■□□□ 1.73
UBE3A-201ENST00000232165 PABPN1Q86U42 306 aaKnown RBP eCLIP25.69■■□□□ 1.7
UBE3A-201ENST00000232165 MYT1LQ9UL68 1186 aa25.59■■□□□ 1.69
UBE3A-201ENST00000232165 POLR3GLQ9BT43 218 aa25.43■■□□□ 1.66
UBE3A-201ENST00000232165 FAM50AQ14320 339 aaKnown RBP25.35■■□□□ 1.65
UBE3A-201ENST00000232165 ZCCHC6Q5VYS8 1495 aaKnown RBP25.35■■□□□ 1.65
UBE3A-201ENST00000232165 DIEXFQ68CQ4 756 aaKnown RBP25.29■■□□□ 1.64
UBE3A-201ENST00000232165 CSRNP3Q8WYN3 585 aa25.19■■□□□ 1.62
UBE3A-201ENST00000232165 TRIM52Q96A61 297 aa25.16■■□□□ 1.62
UBE3A-201ENST00000232165 CCDC180Q9P1Z9 1646 aa25.15■■□□□ 1.62
UBE3A-201ENST00000232165 DAXXQ9UER7 740 aaPredicted RBP25.13■■□□□ 1.61
UBE3A-201ENST00000232165 SCRIBQ14160 1630 aa25.09■■□□□ 1.61
UBE3A-201ENST00000232165 CNGB1Q14028 1251 aaPredicted RBP25.03■■□□□ 1.6
UBE3A-201ENST00000232165 NEUROD1Q13562 356 aa25.02■■□□□ 1.6
UBE3A-201ENST00000232165 SLC4A1APQ9BWU0 796 aaKnown RBP24.93■■□□□ 1.58
UBE3A-201ENST00000232165 FBLN2P98095 1184 aa24.89■■□□□ 1.58
UBE3A-201ENST00000232165 ZNF316A6NFI3 1004 aaPredicted RBP24.87■■□□□ 1.57
UBE3A-201ENST00000232165 ANP32CO43423 234 aa24.86■■□□□ 1.57
UBE3A-201ENST00000232165 DCAF1Q9Y4B6 1507 aa24.79■■□□□ 1.56
UBE3A-201ENST00000232165 P3H3Q8IVL6 736 aa24.78■■□□□ 1.56
UBE3A-201ENST00000232165 CDK11AQ9UQ88 783 aaPredicted RBP24.76■■□□□ 1.55
UBE3A-201ENST00000232165 ZNF326Q5BKZ1 582 aaKnown RBP24.73■■□□□ 1.55
UBE3A-201ENST00000232165 CLSPNQ9HAW4 1339 aa24.66■■□□□ 1.54
UBE3A-201ENST00000232165 RB1CC1Q8TDY2 1594 aa24.6■■□□□ 1.53
UBE3A-201ENST00000232165 GTF3C3Q9Y5Q9 886 aa24.57■■□□□ 1.52
UBE3A-201ENST00000232165 ARID3CA6NKF2 412 aa24.55■■□□□ 1.52
UBE3A-201ENST00000232165 RTL5Q5HYW3 569 aaPredicted RBP24.55■■□□□ 1.52
UBE3A-201ENST00000232165 ZNF777Q9ULD5 760 aaPredicted RBP24.52■■□□□ 1.52
UBE3A-201ENST00000232165 NACADO15069 1562 aa24.46■■□□□ 1.51
UBE3A-201ENST00000232165 RSF1Q96T23 1441 aaPredicted RBP24.44■■□□□ 1.5
UBE3A-201ENST00000232165 TONSLQ96HA7 1378 aa24.44■■□□□ 1.5
UBE3A-201ENST00000232165 EEA1Q15075 1411 aa24.43■■□□□ 1.5
UBE3A-201ENST00000232165 BCANQ96GW7 911 aa24.42■■□□□ 1.5
UBE3A-201ENST00000232165 ACIN1Q9UKV3 1341 aaKnown RBP24.4■■□□□ 1.5
UBE3A-201ENST00000232165 CLIP1P30622 1438 aa24.33■■□□□ 1.49
UBE3A-201ENST00000232165 NEFMP07197 916 aa24.32■■□□□ 1.48
UBE3A-201ENST00000232165 ZBTB47Q9UFB7 747 aaPredicted RBP24.31■■□□□ 1.48
UBE3A-201ENST00000232165 CANXP27824 592 aaKnown RBP24.26■■□□□ 1.47
UBE3A-201ENST00000232165 GOLGA3Q08378 1498 aa24.25■■□□□ 1.47
UBE3A-201ENST00000232165 MTUS2Q5JR59 1369 aa24.23■■□□□ 1.47
UBE3A-201ENST00000232165 NPM1P06748 294 aaKnown RBP eCLIP24.2■■□□□ 1.46
UBE3A-201ENST00000232165 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.465e-6■■■■■ 29.2
UBE3A-201ENST00000232165 BAZ1BQ9UIG0 1483 aaKnown RBP24.16■■□□□ 1.46
UBE3A-201ENST00000232165 CEP162Q5TB80 1403 aa24.13■■□□□ 1.45
UBE3A-201ENST00000232165 TSPY4P0CV99 314 aa24.13■■□□□ 1.45
UBE3A-201ENST00000232165 TSPY10P0CW01 314 aa24.13■■□□□ 1.45
UBE3A-201ENST00000232165 ESF1Q9H501 851 aaKnown RBP24.13■■□□□ 1.45
UBE3A-201ENST00000232165 CHIC2Q9UKJ5 165 aa24.12■■□□□ 1.45
UBE3A-201ENST00000232165 CHMP7Q8WUX9 453 aaPredicted RBP24.11■■□□□ 1.45
UBE3A-201ENST00000232165 DDX10Q13206 875 aaKnown RBP24.09■■□□□ 1.45
UBE3A-201ENST00000232165 BAZ1AQ9NRL2 1556 aaPredicted RBP24.08■■□□□ 1.45
UBE3A-201ENST00000232165 MYO15BQ96JP2 1530 aa24.07■■□□□ 1.44
UBE3A-201ENST00000232165 TNIKQ9UKE5 1360 aa24.06■■□□□ 1.44
UBE3A-201ENST00000232165 KIF27Q86VH2 1401 aa24.05■■□□□ 1.44
UBE3A-201ENST00000232165 CEP164Q9UPV0 1460 aa24.04■■□□□ 1.44
UBE3A-201ENST00000232165 CHGAP10645 457 aaKnown RBP24.04■■□□□ 1.44
UBE3A-201ENST00000232165 HNRNPUQ00839 825 aaKnown RBP eCLIP24.02■■□□□ 1.44
UBE3A-201ENST00000232165 ANP32AP39687 249 aaKnown RBP24.01■■□□□ 1.43
UBE3A-201ENST00000232165 STAG3Q9UJ98 1225 aa24.01■■□□□ 1.43
UBE3A-201ENST00000232165 SLC24A1O60721 1099 aa23.97■■□□□ 1.43
UBE3A-201ENST00000232165 FKBP8Q14318 412 aa23.95■■□□□ 1.43
UBE3A-201ENST00000232165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.95■■□□□ 1.429e-8■■■□□ 14.6
UBE3A-201ENST00000232165 FAM9BQ8IZU0 186 aa23.93■■□□□ 1.42
UBE3A-201ENST00000232165 TMC1Q8TDI8 760 aa23.91■■□□□ 1.42
UBE3A-201ENST00000232165 PLEKHD1A6NEE1 506 aa23.87■■□□□ 1.41
UBE3A-201ENST00000232165 EIF4G2P78344 907 aaKnown RBP eCLIP23.86■■□□□ 1.41
UBE3A-201ENST00000232165 RRP7BPQ9NSQ0 103 aa23.83■■□□□ 1.41
UBE3A-201ENST00000232165 CECR2Q9BXF3 1484 aa23.82■■□□□ 1.4
UBE3A-201ENST00000232165 MRS2Q9HD23 443 aa23.82■■□□□ 1.4
UBE3A-201ENST00000232165 KDM2AQ9Y2K7 1162 aa23.81■■□□□ 1.4
UBE3A-201ENST00000232165 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms