RNA–Protein interactions for RNA: ENST00000436172.1

CUL3-206, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-206ENST00000436172 AEBP2Q6ZN18 517 aaPredicted RBP21.42■■□□□ 1.02
CUL3-206ENST00000436172 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
CUL3-206ENST00000436172 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
CUL3-206ENST00000436172 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
CUL3-206ENST00000436172 FOXD1Q16676 465 aa17.1■□□□□ 0.33
CUL3-206ENST00000436172 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
CUL3-206ENST00000436172 MSH5O43196 834 aa16.17■□□□□ 0.18
CUL3-206ENST00000436172 PIAS4Q8N2W9 510 aaPredicted RBP15.98■□□□□ 0.15
CUL3-206ENST00000436172 POTEDQ86YR6 584 aa15.92■□□□□ 0.14
CUL3-206ENST00000436172 PPP6R1Q9UPN7 881 aa15.83■□□□□ 0.12
CUL3-206ENST00000436172 ADRA2BP18089 450 aa15.78■□□□□ 0.12
CUL3-206ENST00000436172 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
CUL3-206ENST00000436172 DMRT2Q9Y5R5 561 aa14.58□□□□□ -0.08
CUL3-206ENST00000436172 MAPK8IP2Q13387 824 aaPredicted RBP14.51□□□□□ -0.09
CUL3-206ENST00000436172 PPP4R3CPQ6ZMV5 832 aa14.13□□□□□ -0.15
CUL3-206ENST00000436172 HOXD11P31277 338 aaPredicted RBP13.98□□□□□ -0.17
CUL3-206ENST00000436172 CNKSR2Q8WXI2 1034 aa13.94□□□□□ -0.18
CUL3-206ENST00000436172 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
CUL3-206ENST00000436172 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.18
CUL3-206ENST00000436172 RNF216Q9NWF9 866 aaPredicted RBP13.85□□□□□ -0.19
CUL3-206ENST00000436172 RNF39Q9H2S5 420 aa13.73□□□□□ -0.21
CUL3-206ENST00000436172 NCBP3Q53F19 620 aaKnown RBP13.63□□□□□ -0.23
CUL3-206ENST00000436172 DNAJC5BQ9UF47 199 aa13.63□□□□□ -0.23
CUL3-206ENST00000436172 C1QBPQ07021 282 aaKnown RBP13.58□□□□□ -0.24
CUL3-206ENST00000436172 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
CUL3-206ENST00000436172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.31□□□□□ -0.288e-7■■□□□ 12.5
CUL3-206ENST00000436172 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
CUL3-206ENST00000436172 KCNA4P22459 653 aa12.92□□□□□ -0.34
CUL3-206ENST00000436172 CAPN15O75808 1086 aa12.83□□□□□ -0.36
CUL3-206ENST00000436172 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
CUL3-206ENST00000436172 DSG3P32926 999 aa12.79□□□□□ -0.36
CUL3-206ENST00000436172 APLP2Q06481 763 aa12.77□□□□□ -0.37
CUL3-206ENST00000436172 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
CUL3-206ENST00000436172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.7□□□□□ -0.38
CUL3-206ENST00000436172 HNRNPUL2Q1KMD3 747 aaKnown RBP12.7□□□□□ -0.38
CUL3-206ENST00000436172 ZNF219Q9P2Y4 722 aaPredicted RBP12.63□□□□□ -0.39
CUL3-206ENST00000436172 SAMD1Q6SPF0 538 aaPredicted RBP12.59□□□□□ -0.39
CUL3-206ENST00000436172 TRHP20396 242 aaPredicted RBP12.57□□□□□ -0.4
CUL3-206ENST00000436172 ABCB7O75027 752 aa12.47□□□□□ -0.41
CUL3-206ENST00000436172 POTEHQ6S545 545 aa12.47□□□□□ -0.41
CUL3-206ENST00000436172 MYCNP04198 464 aaPredicted RBP12.4□□□□□ -0.42
CUL3-206ENST00000436172 RBM42Q9BTD8 480 aaKnown RBP12.31□□□□□ -0.44
CUL3-206ENST00000436172 POLA2Q14181 598 aa12.22□□□□□ -0.45
CUL3-206ENST00000436172 SLC4A1APQ9BWU0 796 aaKnown RBP12.22□□□□□ -0.45
CUL3-206ENST00000436172 FOXD4L1Q9NU39 408 aa12.17□□□□□ -0.46
CUL3-206ENST00000436172 ZBTB12Q9Y330 459 aaPredicted RBP12.09□□□□□ -0.47
CUL3-206ENST00000436172 CHRDL2Q6WN34 429 aa12.02□□□□□ -0.49
CUL3-206ENST00000436172 ATF5Q9Y2D1 282 aaPredicted RBP11.99□□□□□ -0.49
CUL3-206ENST00000436172 AKT1S1Q96B36 256 aa11.96□□□□□ -0.49
CUL3-206ENST00000436172 ATXN8OSP0DMR3 200 aa11.88□□□□□ -0.51
CUL3-206ENST00000436172 ZBTB22O15209 634 aa11.84□□□□□ -0.51
CUL3-206ENST00000436172 OSCARQ8IYS5 282 aa11.82□□□□□ -0.52
CUL3-206ENST00000436172 REM2Q8IYK8 340 aaPredicted RBP11.8□□□□□ -0.52
CUL3-206ENST00000436172 FBLN2P98095 1184 aa11.69□□□□□ -0.54
CUL3-206ENST00000436172 PIP4P2Q8N4L2 257 aa11.68□□□□□ -0.54
CUL3-206ENST00000436172 PITPNM1O00562 1244 aa11.66□□□□□ -0.54
CUL3-206ENST00000436172 SPDYE2BA6NHP3 402 aa11.65□□□□□ -0.54
CUL3-206ENST00000436172 SPDYE6P0CI01 402 aa11.65□□□□□ -0.54
CUL3-206ENST00000436172 SPDYE2Q495Y8 402 aa11.65□□□□□ -0.54
CUL3-206ENST00000436172 SP7Q8TDD2 431 aaPredicted RBP11.64□□□□□ -0.55
CUL3-206ENST00000436172 FXR2P51116 673 aaKnown RBP eCLIP11.61□□□□□ -0.55
CUL3-206ENST00000436172 HAX1O00165 279 aa11.51□□□□□ -0.57
CUL3-206ENST00000436172 SPDYE1Q8NFV5 336 aaPredicted RBP11.48□□□□□ -0.57
CUL3-206ENST00000436172 MKRN4PQ13434 485 aaPredicted RBP11.47□□□□□ -0.57
CUL3-206ENST00000436172 SSUH2Q9Y2M2 353 aa11.45□□□□□ -0.58
CUL3-206ENST00000436172 ZNF692Q9BU19 519 aaPredicted RBP11.44□□□□□ -0.58
CUL3-206ENST00000436172 CLEC11AQ9Y240 323 aa11.39□□□□□ -0.59
CUL3-206ENST00000436172 PRKAR2AP13861 404 aaKnown RBP11.37□□□□□ -0.59
CUL3-206ENST00000436172 EVX2Q03828 476 aa11.27□□□□□ -0.61
CUL3-206ENST00000436172 PABPN1Q86U42 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
CUL3-206ENST00000436172 C19orf67A6NJJ6 358 aa11.24□□□□□ -0.61
CUL3-206ENST00000436172 PRR29P0C7W0 189 aa11.22□□□□□ -0.61
CUL3-206ENST00000436172 CSRNP3Q8WYN3 585 aa11.2□□□□□ -0.62
CUL3-206ENST00000436172 CHADLQ6NUI6 762 aa11.14□□□□□ -0.63
CUL3-206ENST00000436172 GABBR2O75899 941 aa11.08□□□□□ -0.64
CUL3-206ENST00000436172 FARP1Q9Y4F1 1045 aaPredicted RBP11.04□□□□□ -0.64
CUL3-206ENST00000436172 CLCN6P51797 869 aa11.03□□□□□ -0.64
CUL3-206ENST00000436172 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
CUL3-206ENST00000436172 CD44P16070 742 aaKnown RBP11□□□□□ -0.65
CUL3-206ENST00000436172 EHMT2Q96KQ7 1210 aa10.95□□□□□ -0.66
CUL3-206ENST00000436172 SPDYE4A6NLX3 237 aa10.91□□□□□ -0.66
CUL3-206ENST00000436172 LHX8Q68G74 356 aa10.9□□□□□ -0.66
CUL3-206ENST00000436172 CREBZFQ9NS37 354 aa10.88□□□□□ -0.67
CUL3-206ENST00000436172 ZNF579Q8NAF0 562 aaKnown RBP10.86□□□□□ -0.67
CUL3-206ENST00000436172 ZRANB1Q9UGI0 708 aa10.82□□□□□ -0.68
CUL3-206ENST00000436172 POTEIP0CG38 1075 aa10.8□□□□□ -0.68
CUL3-206ENST00000436172 DCBLD2Q96PD2 775 aa10.8□□□□□ -0.68
CUL3-206ENST00000436172 PAK3O75914 559 aaPredicted RBP10.78□□□□□ -0.68
CUL3-206ENST00000436172 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
CUL3-206ENST00000436172 MNX1P50219 401 aaPredicted RBP10.67□□□□□ -0.7
CUL3-206ENST00000436172 GALR2O43603 387 aaPredicted RBP10.66□□□□□ -0.7
CUL3-206ENST00000436172 PROM2Q8N271 834 aa10.65□□□□□ -0.7
CUL3-206ENST00000436172 PHF12Q96QT6 1004 aa10.61□□□□□ -0.71
CUL3-206ENST00000436172 PLEKHG5O94827 1062 aa10.53□□□□□ -0.72
CUL3-206ENST00000436172 ASTLQ6HA08 431 aaPredicted RBP10.49□□□□□ -0.73
CUL3-206ENST00000436172 MS4A3Q96HJ5 214 aa10.48□□□□□ -0.73
CUL3-206ENST00000436172 C7P10643 843 aa10.46□□□□□ -0.73
CUL3-206ENST00000436172 SLC39A7Q92504 469 aa10.46□□□□□ -0.73
CUL3-206ENST00000436172 OTUD5Q96G74 571 aa10.46□□□□□ -0.73
CUL3-206ENST00000436172 TSPYL2Q9H2G4 693 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms