RNA–Protein interactions for RNA: ENST00000626793.2

UBE3A-213, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-213ENST00000626793 NISCHQ9Y2I1 1504 aa57.09■■■■■ 6.73
UBE3A-213ENST00000626793 ABCC9O60706 1549 aa52.1■■■■■ 5.93
UBE3A-213ENST00000626793 CCDC180Q9P1Z9 1646 aa51.22■■■■■ 5.79
UBE3A-213ENST00000626793 DNAJC5BQ9UF47 199 aa49.51■■■■■ 5.52
UBE3A-213ENST00000626793 RB1CC1Q8TDY2 1594 aa49.15■■■■■ 5.46
UBE3A-213ENST00000626793 DCAF8L2P0C7V8 631 aa48.77■■■■■ 5.4
UBE3A-213ENST00000626793 NACADO15069 1562 aa48.68■■■■■ 5.38
UBE3A-213ENST00000626793 PABPN1Q86U42 306 aaKnown RBP eCLIP48.59■■■■■ 5.37
UBE3A-213ENST00000626793 UNC13AQ9UPW8 1703 aa47.91■■■■■ 5.26
UBE3A-213ENST00000626793 BICRAQ9NZM4 1560 aa47.79■■■■■ 5.24
UBE3A-213ENST00000626793 MYO15BQ96JP2 1530 aa47.78■■■■■ 5.24
UBE3A-213ENST00000626793 ZCCHC6Q5VYS8 1495 aaKnown RBP47.16■■■■■ 5.14
UBE3A-213ENST00000626793 DCAF1Q9Y4B6 1507 aa47■■■■■ 5.12
UBE3A-213ENST00000626793 CECR2Q9BXF3 1484 aa46.94■■■■■ 5.1
UBE3A-213ENST00000626793 SHROOM4Q9ULL8 1493 aa46.93■■■■■ 5.1
UBE3A-213ENST00000626793 CC2D2AQ9P2K1 1620 aa46.9■■■■■ 5.1
UBE3A-213ENST00000626793 SCRIBQ14160 1630 aa46.87■■■■■ 5.09
UBE3A-213ENST00000626793 EIF4G1Q04637 1599 aaKnown RBP46.66■■■■■ 5.06
UBE3A-213ENST00000626793 DNAJC5Q9H3Z4 198 aa45.74■■■■■ 4.91
UBE3A-213ENST00000626793 NCAPD3P42695 1498 aa45.05■■■■■ 4.8
UBE3A-213ENST00000626793 ERCC6Q03468 1493 aa44.96■■■■■ 4.79
UBE3A-213ENST00000626793 CUX2O14529 1486 aa44.95■■■■■ 4.79
UBE3A-213ENST00000626793 ATAD2BQ9ULI0 1458 aa44.87■■■■■ 4.77
UBE3A-213ENST00000626793 NESP48681 1621 aa44.61■■■■■ 4.73
UBE3A-213ENST00000626793 SMARCA2P51531 1590 aa44.59■■■■■ 4.73
UBE3A-213ENST00000626793 SMARCA4P51532 1647 aa44.58■■■■■ 4.73
UBE3A-213ENST00000626793 HMGXB3Q12766 1538 aa44.55■■■■■ 4.72
UBE3A-213ENST00000626793 BAZ1BQ9UIG0 1483 aaKnown RBP44.38■■■■■ 4.69
UBE3A-213ENST00000626793 BAZ1AQ9NRL2 1556 aaPredicted RBP44.29■■■■■ 4.68
UBE3A-213ENST00000626793 PEG3Q9GZU2 1588 aa44.09■■■■■ 4.65
UBE3A-213ENST00000626793 THOC2Q8NI27 1593 aaKnown RBP44.05■■■■■ 4.64
UBE3A-213ENST00000626793 MROH2BQ7Z745 1585 aa44.05■■■■■ 4.64
UBE3A-213ENST00000626793 LAMC3Q9Y6N6 1575 aa44.01■■■■■ 4.64
UBE3A-213ENST00000626793 PDS5BQ9NTI5 1447 aa43.9■■■■■ 4.62
UBE3A-213ENST00000626793 KIF21AQ7Z4S6 1674 aa43.8■■■■■ 4.6
UBE3A-213ENST00000626793 CADPSQ9ULU8 1353 aa43.73■■■■■ 4.59
UBE3A-213ENST00000626793 TRIM41Q8WV44 630 aa43.63■■■■■ 4.57
UBE3A-213ENST00000626793 MRC2Q9UBG0 1479 aa43.52■■■■■ 4.56
UBE3A-213ENST00000626793 WIZO95785 1651 aa43.43■■■■■ 4.54
UBE3A-213ENST00000626793 WDR62O43379 1518 aa43.38■■■■■ 4.53
UBE3A-213ENST00000626793 CEP164Q9UPV0 1460 aa43.24■■■■■ 4.51
UBE3A-213ENST00000626793 FANCD2Q9BXW9 1451 aa43.19■■■■■ 4.51
UBE3A-213ENST00000626793 CFTRP13569 1480 aa43.06■■■■■ 4.48
UBE3A-213ENST00000626793 OSCARQ8IYS5 282 aa43.03■■■■■ 4.48
UBE3A-213ENST00000626793 RSF1Q96T23 1441 aaPredicted RBP42.98■■■■■ 4.47
UBE3A-213ENST00000626793 URB2Q14146 1524 aaKnown RBP42.87■■■■■ 4.45
UBE3A-213ENST00000626793 TOP2AP11388 1531 aaKnown RBP42.79■■■■■ 4.44
UBE3A-213ENST00000626793 ZNF608Q9ULD9 1512 aaPredicted RBP42.49■■■■■ 4.39
UBE3A-213ENST00000626793 CCDC88BA6NC98 1476 aa42.46■■■■■ 4.39
UBE3A-213ENST00000626793 IFT140Q96RY7 1462 aa42.39■■■■■ 4.38
UBE3A-213ENST00000626793 RIMBP3CA6NJZ7 1639 aa42.33■■■■■ 4.37
UBE3A-213ENST00000626793 RIMBP3BA6NNM3 1639 aa42.33■■■■■ 4.37
UBE3A-213ENST00000626793 RIMBP3Q9UFD9 1639 aa42.33■■■■■ 4.37
UBE3A-213ENST00000626793 TOPBP1Q92547 1522 aa42.29■■■■■ 4.36
UBE3A-213ENST00000626793 PRDM2Q13029 1718 aa42.24■■■■■ 4.35
UBE3A-213ENST00000626793 ARHGEF11O15085 1522 aa42.19■■■■■ 4.34
UBE3A-213ENST00000626793 CYB5RLQ6IPT4 315 aa42.13■■■■■ 4.33
UBE3A-213ENST00000626793 AQRO60306 1485 aaKnown RBP eCLIP42.09■■■■■ 4.332e-7■■■■□ 21.4
UBE3A-213ENST00000626793 ABCC8Q09428 1581 aa42.09■■■■■ 4.33
UBE3A-213ENST00000626793 EIF4G3O43432 1585 aaKnown RBP42.05■■■■■ 4.32
UBE3A-213ENST00000626793 FBLN2P98095 1184 aa42.02■■■■■ 4.32
UBE3A-213ENST00000626793 DNMBPQ6XZF7 1577 aa42.01■■■■■ 4.32
UBE3A-213ENST00000626793 TARBP1Q13395 1621 aaKnown RBP41.89■■■■■ 4.3
UBE3A-213ENST00000626793 TRHP20396 242 aaPredicted RBP41.84■■■■■ 4.29
UBE3A-213ENST00000626793 POLA1P09884 1462 aaPredicted RBP41.84■■■■■ 4.29
UBE3A-213ENST00000626793 RAD54L2Q9Y4B4 1467 aa41.8■■■■■ 4.28
UBE3A-213ENST00000626793 CHD1O14646 1710 aa41.78■■■■■ 4.28
UBE3A-213ENST00000626793 TDRD9Q8NDG6 1382 aaKnown RBP41.77■■■■■ 4.28
UBE3A-213ENST00000626793 ARAP1Q96P48 1450 aa41.77■■■■■ 4.28
UBE3A-213ENST00000626793 SOGA1O94964 1423 aa41.71■■■■■ 4.27
UBE3A-213ENST00000626793 CHMP7Q8WUX9 453 aaPredicted RBP41.55■■■■■ 4.24
UBE3A-213ENST00000626793 SNAPC4Q5SXM2 1469 aa41.53■■■■■ 4.24
UBE3A-213ENST00000626793 FGD5Q6ZNL6 1462 aa41.51■■■■■ 4.24
UBE3A-213ENST00000626793 CUX1P39880 1505 aa41.39■■■■■ 4.22
UBE3A-213ENST00000626793 CLASP1Q7Z460 1538 aa41.37■■■■■ 4.21
UBE3A-213ENST00000626793 GRIN2BQ13224 1484 aa41.33■■■■■ 4.21
UBE3A-213ENST00000626793 MAGI1Q96QZ7 1491 aaPredicted RBP41.32■■■■■ 4.2
UBE3A-213ENST00000626793 WDR97A6NE52 1622 aa41.27■■■■■ 4.2
UBE3A-213ENST00000626793 SYNJ1O43426 1573 aa41.27■■■■■ 4.2
UBE3A-213ENST00000626793 SYNJ2O15056 1496 aa41.24■■■■■ 4.19
UBE3A-213ENST00000626793 GAPVD1Q14C86 1478 aa41.15■■■■■ 4.18
UBE3A-213ENST00000626793 AEBP2Q6ZN18 517 aaPredicted RBP40.96■■■■■ 4.15
UBE3A-213ENST00000626793 ABCA10Q8WWZ4 1543 aa40.96■■■■■ 4.15
UBE3A-213ENST00000626793 PBRM1Q86U86 1689 aa40.95■■■■■ 4.15
UBE3A-213ENST00000626793 SUPT5HO00267 1087 aaKnown RBP40.9■■■■■ 4.14
UBE3A-213ENST00000626793 ABCA5Q8WWZ7 1642 aa40.86■■■■■ 4.13
UBE3A-213ENST00000626793 ERCC6L2Q5T890 1561 aa40.81■■■■■ 4.12
UBE3A-213ENST00000626793 GRIN2AQ12879 1464 aa40.79■■■■■ 4.12
UBE3A-213ENST00000626793 WRNQ14191 1432 aaPredicted RBP eCLIP40.76■■■■■ 4.125e-6■■■■■ 29.2
UBE3A-213ENST00000626793 NUP160Q12769 1436 aa40.67■■■■■ 4.1
UBE3A-213ENST00000626793 CEP170Q5SW79 1584 aa40.65■■■■■ 4.1
UBE3A-213ENST00000626793 ADAMTS12P58397 1594 aa40.61■■■■■ 4.09
UBE3A-213ENST00000626793 FHAD1B1AJZ9 1412 aa40.59■■■■■ 4.09
UBE3A-213ENST00000626793 TOP2BQ02880 1626 aa40.49■■■■■ 4.07
UBE3A-213ENST00000626793 SHROOM2Q13796 1616 aa40.43■■■■■ 4.06
UBE3A-213ENST00000626793 BIVM-ERCC5R4GMW8 1640 aa40.42■■■■■ 4.06
UBE3A-213ENST00000626793 JPH4Q96JJ6 628 aa40.42■■■■■ 4.06
UBE3A-213ENST00000626793 PRG4Q92954 1404 aaPredicted RBP40.42■■■■■ 4.06
UBE3A-213ENST00000626793 ERICH3Q5RHP9 1530 aa40.4■■■■■ 4.06
UBE3A-213ENST00000626793 FAM69CQ0P6D2 419 aa40.21■■■■■ 4.03
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms