RNA–Protein interactions for RNA: ENST00000635914.1

UBE3A-224, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 9,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-224ENST00000635914 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
UBE3A-224ENST00000635914 PELP1Q8IZL8 1130 aaKnown RBP22.72■■□□□ 1.23
UBE3A-224ENST00000635914 FAM9AQ8IZU1 332 aaPredicted RBP21.89■■□□□ 1.1
UBE3A-224ENST00000635914 APLP2Q06481 763 aa21.66■■□□□ 1.06
UBE3A-224ENST00000635914 CCER1Q8TC90 406 aaPredicted RBP21.6■■□□□ 1.05
UBE3A-224ENST00000635914 SUPT5HO00267 1087 aaKnown RBP21.44■■□□□ 1.02
UBE3A-224ENST00000635914 ERICH6Q7L0X2 663 aa21.4■■□□□ 1.02
UBE3A-224ENST00000635914 NISCHQ9Y2I1 1504 aa21.12■□□□□ 0.97
UBE3A-224ENST00000635914 CENPBP07199 599 aaPredicted RBP21.03■□□□□ 0.96
UBE3A-224ENST00000635914 MYT1Q01538 1121 aa21.01■□□□□ 0.95
UBE3A-224ENST00000635914 SHROOM4Q9ULL8 1493 aa20.88■□□□□ 0.93
UBE3A-224ENST00000635914 EHMT2Q96KQ7 1210 aa20.88■□□□□ 0.93
UBE3A-224ENST00000635914 NEFLP07196 543 aa20.85■□□□□ 0.93
UBE3A-224ENST00000635914 ZEB1P37275 1124 aaPredicted RBP20.8■□□□□ 0.92
UBE3A-224ENST00000635914 YTHDC1Q96MU7 727 aaKnown RBP20.8■□□□□ 0.92
UBE3A-224ENST00000635914 DAXXQ9UER7 740 aaPredicted RBP20.63■□□□□ 0.89
UBE3A-224ENST00000635914 PCGF6Q9BYE7 350 aa20.43■□□□□ 0.86
UBE3A-224ENST00000635914 ATP1B4Q9UN42 357 aaPredicted RBP20.41■□□□□ 0.86
UBE3A-224ENST00000635914 TTBK1Q5TCY1 1321 aaPredicted RBP20.35■□□□□ 0.85
UBE3A-224ENST00000635914 RANGAP1P46060 587 aaPredicted RBP20.17■□□□□ 0.82
UBE3A-224ENST00000635914 UBTFP17480 764 aaKnown RBP20.16■□□□□ 0.82
UBE3A-224ENST00000635914 TRIM41Q8WV44 630 aa20.14■□□□□ 0.81
UBE3A-224ENST00000635914 ZNF316A6NFI3 1004 aaPredicted RBP20.04■□□□□ 0.8
UBE3A-224ENST00000635914 MYT1LQ9UL68 1186 aa20.01■□□□□ 0.79
UBE3A-224ENST00000635914 RTL5Q5HYW3 569 aaPredicted RBP19.91■□□□□ 0.78
UBE3A-224ENST00000635914 CLSPNQ9HAW4 1339 aa19.8■□□□□ 0.76
UBE3A-224ENST00000635914 POLR3GLQ9BT43 218 aa19.73■□□□□ 0.75
UBE3A-224ENST00000635914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.73■□□□□ 0.75
UBE3A-224ENST00000635914 HNRNPUL2Q1KMD3 747 aaKnown RBP19.73■□□□□ 0.75
UBE3A-224ENST00000635914 SLC4A1APQ9BWU0 796 aaKnown RBP19.72■□□□□ 0.75
UBE3A-224ENST00000635914 ZBTB47Q9UFB7 747 aaPredicted RBP19.68■□□□□ 0.74
UBE3A-224ENST00000635914 CHIC1Q5VXU3 224 aa19.61■□□□□ 0.73
UBE3A-224ENST00000635914 TRIM26Q12899 539 aaPredicted RBP19.54■□□□□ 0.72
UBE3A-224ENST00000635914 NEFMP07197 916 aa19.43■□□□□ 0.7
UBE3A-224ENST00000635914 ITGAEP38570 1179 aa19.39■□□□□ 0.69
UBE3A-224ENST00000635914 ANP32BQ92688 251 aaKnown RBP19.28■□□□□ 0.68
UBE3A-224ENST00000635914 CANXP27824 592 aaKnown RBP19.26■□□□□ 0.67
UBE3A-224ENST00000635914 CNGB1Q14028 1251 aaPredicted RBP19.2■□□□□ 0.66
UBE3A-224ENST00000635914 HRCP23327 699 aa19.19■□□□□ 0.66
UBE3A-224ENST00000635914 SLC24A1O60721 1099 aa19.18■□□□□ 0.66
UBE3A-224ENST00000635914 CDK11AQ9UQ88 783 aaPredicted RBP19.16■□□□□ 0.66
UBE3A-224ENST00000635914 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
UBE3A-224ENST00000635914 ANP32CO43423 234 aa19.07■□□□□ 0.64
UBE3A-224ENST00000635914 GLIPR1L2Q4G1C9 344 aa19.05■□□□□ 0.64
UBE3A-224ENST00000635914 FAM50AQ14320 339 aaKnown RBP19.05■□□□□ 0.64
UBE3A-224ENST00000635914 ANP32AP39687 249 aaKnown RBP19.05■□□□□ 0.64
UBE3A-224ENST00000635914 DIEXFQ68CQ4 756 aaKnown RBP19.04■□□□□ 0.64
UBE3A-224ENST00000635914 TRIM52Q96A61 297 aa19.04■□□□□ 0.64
UBE3A-224ENST00000635914 HSP90AA1P07900 732 aaKnown RBP19■□□□□ 0.63
UBE3A-224ENST00000635914 BCANQ96GW7 911 aa18.99■□□□□ 0.63
UBE3A-224ENST00000635914 CDK11BP21127 795 aaKnown RBP18.97■□□□□ 0.63
UBE3A-224ENST00000635914 UPF2Q9HAU5 1272 aaKnown RBP18.97■□□□□ 0.63
UBE3A-224ENST00000635914 ESF1Q9H501 851 aaKnown RBP18.87■□□□□ 0.61
UBE3A-224ENST00000635914 ZNF326Q5BKZ1 582 aaKnown RBP18.85■□□□□ 0.61
UBE3A-224ENST00000635914 BCL11AQ9H165 835 aa18.79■□□□□ 0.6
UBE3A-224ENST00000635914 NEUROD1Q13562 356 aa18.77■□□□□ 0.59
UBE3A-224ENST00000635914 STAG3Q9UJ98 1225 aa18.62■□□□□ 0.57
UBE3A-224ENST00000635914 MYH16Q9H6N6 1097 aa18.61■□□□□ 0.57
UBE3A-224ENST00000635914 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.6■□□□□ 0.57
UBE3A-224ENST00000635914 FBLN2P98095 1184 aa18.58■□□□□ 0.57
UBE3A-224ENST00000635914 EIF5BO60841 1220 aaKnown RBP18.57■□□□□ 0.56
UBE3A-224ENST00000635914 NPM2Q86SE8 214 aaKnown RBP18.53■□□□□ 0.56
UBE3A-224ENST00000635914 ANP32EQ9BTT0 268 aa18.5■□□□□ 0.55
UBE3A-224ENST00000635914 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
UBE3A-224ENST00000635914 GTF3C3Q9Y5Q9 886 aa18.45■□□□□ 0.54
UBE3A-224ENST00000635914 TONSLQ96HA7 1378 aa18.45■□□□□ 0.54
UBE3A-224ENST00000635914 LOC105371045A0A1W2PR82 267 aa18.44■□□□□ 0.54
UBE3A-224ENST00000635914 ZRSR1Q15695 479 aaKnown RBP18.44■□□□□ 0.54
UBE3A-224ENST00000635914 NCLP19338 710 aaKnown RBP18.43■□□□□ 0.54
UBE3A-224ENST00000635914 NPM1P06748 294 aaKnown RBP eCLIP18.38■□□□□ 0.53
UBE3A-224ENST00000635914 GOLGA6L22H0YM25 854 aa18.38■□□□□ 0.53
UBE3A-224ENST00000635914 BECN1Q14457 450 aa18.37■□□□□ 0.53
UBE3A-224ENST00000635914 CASC1Q6TDU7 716 aa18.35■□□□□ 0.53
UBE3A-224ENST00000635914 WDR43Q15061 677 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■□□□□ 10.7
UBE3A-224ENST00000635914 ACIN1Q9UKV3 1341 aaKnown RBP18.34■□□□□ 0.53
UBE3A-224ENST00000635914 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
UBE3A-224ENST00000635914 TRIM44Q96DX7 344 aaPredicted RBP18.32■□□□□ 0.52
UBE3A-224ENST00000635914 SCAF1Q9H7N4 1312 aaKnown RBP18.31■□□□□ 0.52
UBE3A-224ENST00000635914 ZNF777Q9ULD5 760 aaPredicted RBP18.31■□□□□ 0.52
UBE3A-224ENST00000635914 A0A0G2JS52 829 aa18.3■□□□□ 0.52
UBE3A-224ENST00000635914 GOLGA6L6A8MZA4 724 aa18.29■□□□□ 0.52
UBE3A-224ENST00000635914 ABCC9O60706 1549 aa18.27■□□□□ 0.52
UBE3A-224ENST00000635914 DDRGK1Q96HY6 314 aa18.27■□□□□ 0.52
UBE3A-224ENST00000635914 CCDC136Q96JN2 1154 aa18.25■□□□□ 0.51
UBE3A-224ENST00000635914 CCDC180Q9P1Z9 1646 aa18.24■□□□□ 0.51
UBE3A-224ENST00000635914 CHGAP10645 457 aaKnown RBP18.24■□□□□ 0.51
UBE3A-224ENST00000635914 TMC1Q8TDI8 760 aa18.24■□□□□ 0.51
UBE3A-224ENST00000635914 NRDCO43847 1150 aa18.2■□□□□ 0.5
UBE3A-224ENST00000635914 SCRIBQ14160 1630 aa18.17■□□□□ 0.5
UBE3A-224ENST00000635914 HNRNPUQ00839 825 aaKnown RBP eCLIP18.17■□□□□ 0.5
UBE3A-224ENST00000635914 L1TD1Q5T7N2 865 aaKnown RBP18.14■□□□□ 0.5
UBE3A-224ENST00000635914 PTMAP06454 111 aaKnown RBP18.13■□□□□ 0.49
UBE3A-224ENST00000635914 FKBP8Q14318 412 aa18.1■□□□□ 0.49
UBE3A-224ENST00000635914 CHMP4BQ9H444 224 aaKnown RBP18.1■□□□□ 0.49
UBE3A-224ENST00000635914 ARXQ96QS3 562 aa18.08■□□□□ 0.49
UBE3A-224ENST00000635914 C14orf37Q86TY3 774 aa18.07■□□□□ 0.48
UBE3A-224ENST00000635914 DNTTIP2Q5QJE6 756 aaKnown RBP18.06■□□□□ 0.48
UBE3A-224ENST00000635914 HAP1P54257 671 aaPredicted RBP18.06■□□□□ 0.48
UBE3A-224ENST00000635914 PPP1R15AO75807 674 aaPredicted RBP18.06■□□□□ 0.48
UBE3A-224ENST00000635914 NBR1Q14596 966 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms