RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 NISCHQ9Y2I1 1504 aa26.42■■□□□ 1.82
UBE3A-209ENST00000625778 SHROOM4Q9ULL8 1493 aa23.9■■□□□ 1.42
UBE3A-209ENST00000625778 SUPT5HO00267 1087 aaKnown RBP23.74■■□□□ 1.39
UBE3A-209ENST00000625778 HRCP23327 699 aa23.19■■□□□ 1.3
UBE3A-209ENST00000625778 PCGF6Q9BYE7 350 aa23.16■■□□□ 1.3
UBE3A-209ENST00000625778 PPARGC1BQ86YN6 1023 aaKnown RBP23.05■■□□□ 1.28
UBE3A-209ENST00000625778 DCAF8L2P0C7V8 631 aa22.95■■□□□ 1.26
UBE3A-209ENST00000625778 CHIC1Q5VXU3 224 aa22.91■■□□□ 1.26
UBE3A-209ENST00000625778 MYO15BQ96JP2 1530 aa22.91■■□□□ 1.26
UBE3A-209ENST00000625778 LOC105371045A0A1W2PR82 267 aa22.61■■□□□ 1.21
UBE3A-209ENST00000625778 ZCCHC6Q5VYS8 1495 aaKnown RBP22.37■■□□□ 1.17
UBE3A-209ENST00000625778 PELP1Q8IZL8 1130 aaKnown RBP22.25■■□□□ 1.15
UBE3A-209ENST00000625778 EHMT2Q96KQ7 1210 aa22.22■■□□□ 1.15
UBE3A-209ENST00000625778 TRIM26Q12899 539 aaPredicted RBP22.21■■□□□ 1.15
UBE3A-209ENST00000625778 DCAF1Q9Y4B6 1507 aa22.12■■□□□ 1.13
UBE3A-209ENST00000625778 FAM9AQ8IZU1 332 aaPredicted RBP22.07■■□□□ 1.12
UBE3A-209ENST00000625778 SCAF1Q9H7N4 1312 aaKnown RBP21.89■■□□□ 1.09
UBE3A-209ENST00000625778 ZEB1P37275 1124 aaPredicted RBP21.84■■□□□ 1.09
UBE3A-209ENST00000625778 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
UBE3A-209ENST00000625778 CCDC180Q9P1Z9 1646 aa21.75■■□□□ 1.07
UBE3A-209ENST00000625778 TTBK1Q5TCY1 1321 aaPredicted RBP21.59■■□□□ 1.05
UBE3A-209ENST00000625778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.57■■□□□ 1.04
UBE3A-209ENST00000625778 CCER1Q8TC90 406 aaPredicted RBP21.5■■□□□ 1.03
UBE3A-209ENST00000625778 NEUROD1Q13562 356 aa21.44■■□□□ 1.02
UBE3A-209ENST00000625778 MYT1Q01538 1121 aa21.39■■□□□ 1.02
UBE3A-209ENST00000625778 ACIN1Q9UKV3 1341 aaKnown RBP21.39■■□□□ 1.01
UBE3A-209ENST00000625778 GTF3C3Q9Y5Q9 886 aa21.35■■□□□ 1.01
UBE3A-209ENST00000625778 RSF1Q96T23 1441 aaPredicted RBP21.31■■□□□ 1
UBE3A-209ENST00000625778 DIEXFQ68CQ4 756 aaKnown RBP21.28■■□□□ 1
UBE3A-209ENST00000625778 CENPBP07199 599 aaPredicted RBP21.23■□□□□ 0.99
UBE3A-209ENST00000625778 YTHDC1Q96MU7 727 aaKnown RBP21.23■□□□□ 0.99
UBE3A-209ENST00000625778 SCRIBQ14160 1630 aa21.2■□□□□ 0.98
UBE3A-209ENST00000625778 RB1CC1Q8TDY2 1594 aa21.19■□□□□ 0.98
UBE3A-209ENST00000625778 ABCC9O60706 1549 aa21.19■□□□□ 0.98
UBE3A-209ENST00000625778 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.94
UBE3A-209ENST00000625778 UBTFP17480 764 aaKnown RBP20.84■□□□□ 0.93
UBE3A-209ENST00000625778 ZNF316A6NFI3 1004 aaPredicted RBP20.84■□□□□ 0.93
UBE3A-209ENST00000625778 HNRNPUL2Q1KMD3 747 aaKnown RBP20.82■□□□□ 0.92
UBE3A-209ENST00000625778 MIER1Q8N108 512 aa20.77■□□□□ 0.92
UBE3A-209ENST00000625778 MROH2BQ7Z745 1585 aa20.75■□□□□ 0.91
UBE3A-209ENST00000625778 RANGAP1P46060 587 aaPredicted RBP20.73■□□□□ 0.91
UBE3A-209ENST00000625778 CEP162Q5TB80 1403 aa20.66■□□□□ 0.9
UBE3A-209ENST00000625778 WIZO95785 1651 aa20.65■□□□□ 0.9
UBE3A-209ENST00000625778 BCL11AQ9H165 835 aa20.61■□□□□ 0.89
UBE3A-209ENST00000625778 ABCC8Q09428 1581 aa20.59■□□□□ 0.89
UBE3A-209ENST00000625778 CCDC88BA6NC98 1476 aa20.58■□□□□ 0.89
UBE3A-209ENST00000625778 SOGA1O94964 1423 aa20.57■□□□□ 0.88
UBE3A-209ENST00000625778 CSRNP3Q8WYN3 585 aa20.53■□□□□ 0.88
UBE3A-209ENST00000625778 APLP2Q06481 763 aa20.46■□□□□ 0.87
UBE3A-209ENST00000625778 WRNQ14191 1432 aaPredicted RBP eCLIP20.45■□□□□ 0.865e-6■■■■■ 29.2
UBE3A-209ENST00000625778 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
UBE3A-209ENST00000625778 TNIKQ9UKE5 1360 aa20.42■□□□□ 0.86
UBE3A-209ENST00000625778 BAZ1AQ9NRL2 1556 aaPredicted RBP20.3■□□□□ 0.84
UBE3A-209ENST00000625778 SUPT16HQ9Y5B9 1047 aaKnown RBP20.27■□□□□ 0.84
UBE3A-209ENST00000625778 BCANQ96GW7 911 aa20.25■□□□□ 0.83
UBE3A-209ENST00000625778 GOLGA3Q08378 1498 aa20.22■□□□□ 0.83
UBE3A-209ENST00000625778 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
UBE3A-209ENST00000625778 ITGAEP38570 1179 aa20.21■□□□□ 0.83
UBE3A-209ENST00000625778 NACADO15069 1562 aa20.2■□□□□ 0.82
UBE3A-209ENST00000625778 CLIP1P30622 1438 aa20.19■□□□□ 0.82
UBE3A-209ENST00000625778 PABPN1Q86U42 306 aaKnown RBP eCLIP20.14■□□□□ 0.81
UBE3A-209ENST00000625778 PRKCSHP14314 528 aaPredicted RBP20.13■□□□□ 0.81
UBE3A-209ENST00000625778 EEA1Q15075 1411 aa20.12■□□□□ 0.81
UBE3A-209ENST00000625778 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
UBE3A-209ENST00000625778 KCNH8Q96L42 1107 aa20.1■□□□□ 0.81
UBE3A-209ENST00000625778 TSHZ2Q9NRE2 1034 aa20.1■□□□□ 0.81
UBE3A-209ENST00000625778 SMARCA2P51531 1590 aa20.09■□□□□ 0.81
UBE3A-209ENST00000625778 ANP32EQ9BTT0 268 aa20.07■□□□□ 0.8
UBE3A-209ENST00000625778 VPS8Q8N3P4 1428 aa20.02■□□□□ 0.8
UBE3A-209ENST00000625778 CEP164Q9UPV0 1460 aa20.01■□□□□ 0.79
UBE3A-209ENST00000625778 KANK4Q5T7N3 995 aaPredicted RBP19.98■□□□□ 0.79
UBE3A-209ENST00000625778 DHX57Q6P158 1386 aaKnown RBP19.98■□□□□ 0.79
UBE3A-209ENST00000625778 SMARCA4P51532 1647 aa19.96■□□□□ 0.79
UBE3A-209ENST00000625778 FKBP8Q14318 412 aa19.96■□□□□ 0.79
UBE3A-209ENST00000625778 RAPGEF2Q9Y4G8 1499 aa19.95■□□□□ 0.78
UBE3A-209ENST00000625778 CLSPNQ9HAW4 1339 aa19.91■□□□□ 0.78
UBE3A-209ENST00000625778 DDX10Q13206 875 aaKnown RBP19.9■□□□□ 0.78
UBE3A-209ENST00000625778 HIRIP3Q9BW71 556 aaPredicted RBP19.9■□□□□ 0.78
UBE3A-209ENST00000625778 TRIM52Q96A61 297 aa19.84■□□□□ 0.77
UBE3A-209ENST00000625778 SYNJ1O43426 1573 aa19.83■□□□□ 0.77
UBE3A-209ENST00000625778 KIF21BO75037 1637 aa19.81■□□□□ 0.76
UBE3A-209ENST00000625778 NEFLP07196 543 aa19.81■□□□□ 0.76
UBE3A-209ENST00000625778 ATP1B4Q9UN42 357 aaPredicted RBP19.76■□□□□ 0.75
UBE3A-209ENST00000625778 SIN3AQ96ST3 1273 aa19.75■□□□□ 0.75
UBE3A-209ENST00000625778 FAM50AQ14320 339 aaKnown RBP19.71■□□□□ 0.75
UBE3A-209ENST00000625778 RBM19Q9Y4C8 960 aaKnown RBP19.69■□□□□ 0.74
UBE3A-209ENST00000625778 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
UBE3A-209ENST00000625778 CCNB3Q8WWL7 1395 aa19.66■□□□□ 0.74
UBE3A-209ENST00000625778 IRX6P78412 446 aaPredicted RBP19.66■□□□□ 0.74
UBE3A-209ENST00000625778 RAB3GAP2Q9H2M9 1393 aa19.63■□□□□ 0.73
UBE3A-209ENST00000625778 ARAP1Q96P48 1450 aa19.61■□□□□ 0.73
UBE3A-209ENST00000625778 ANP32CO43423 234 aa19.59■□□□□ 0.73
UBE3A-209ENST00000625778 P3H3Q8IVL6 736 aa19.59■□□□□ 0.73
UBE3A-209ENST00000625778 ERICH6Q7L0X2 663 aa19.55■□□□□ 0.72
UBE3A-209ENST00000625778 RRBP1Q9P2E9 1410 aaKnown RBP19.52■□□□□ 0.72
UBE3A-209ENST00000625778 ANO8Q9HCE9 1232 aaPredicted RBP19.5■□□□□ 0.71
UBE3A-209ENST00000625778 HNRNPUQ00839 825 aaKnown RBP eCLIP19.47■□□□□ 0.71
UBE3A-209ENST00000625778 PPP1R15AO75807 674 aaPredicted RBP19.46■□□□□ 0.71
UBE3A-209ENST00000625778 UNC13AQ9UPW8 1703 aa19.46■□□□□ 0.71
UBE3A-209ENST00000625778 WDR97A6NE52 1622 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms