RNA–Protein interactions for RNA: ENST00000626068.2

UBE3A-210, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 2

Gene UBE3A, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-210ENST00000626068 AEBP2Q6ZN18 517 aaPredicted RBP23.38■■□□□ 1.33
UBE3A-210ENST00000626068 CHIC1Q5VXU3 224 aa22.52■■□□□ 1.2
UBE3A-210ENST00000626068 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
UBE3A-210ENST00000626068 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
UBE3A-210ENST00000626068 FOXD1Q16676 465 aa18.51■□□□□ 0.55
UBE3A-210ENST00000626068 PLPPR3Q6T4P5 718 aa18.15■□□□□ 0.5
UBE3A-210ENST00000626068 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
UBE3A-210ENST00000626068 ADRA2BP18089 450 aa17.51■□□□□ 0.39
UBE3A-210ENST00000626068 PIAS4Q8N2W9 510 aaPredicted RBP17.38■□□□□ 0.37
UBE3A-210ENST00000626068 MSH5O43196 834 aa17.21■□□□□ 0.35
UBE3A-210ENST00000626068 POTEDQ86YR6 584 aa16.23■□□□□ 0.19
UBE3A-210ENST00000626068 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
UBE3A-210ENST00000626068 MAPK8IP2Q13387 824 aaPredicted RBP15.98■□□□□ 0.15
UBE3A-210ENST00000626068 PPP4R3CPQ6ZMV5 832 aa15.95■□□□□ 0.14
UBE3A-210ENST00000626068 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
UBE3A-210ENST00000626068 CNKSR2Q8WXI2 1034 aa15.58■□□□□ 0.08
UBE3A-210ENST00000626068 NCBP3Q53F19 620 aaKnown RBP15.45■□□□□ 0.06
UBE3A-210ENST00000626068 HOXD11P31277 338 aaPredicted RBP15.38■□□□□ 0.05
UBE3A-210ENST00000626068 RNF216Q9NWF9 866 aaPredicted RBP15.35■□□□□ 0.05
UBE3A-210ENST00000626068 NPM3O75607 178 aaKnown RBP15.21■□□□□ 0.03
UBE3A-210ENST00000626068 KCNA4P22459 653 aa15.21■□□□□ 0.03
UBE3A-210ENST00000626068 DCAF8L1A6NGE4 600 aa15.18■□□□□ 0.02
UBE3A-210ENST00000626068 DNAJC5BQ9UF47 199 aa14.82□□□□□ -0.04
UBE3A-210ENST00000626068 RNF39Q9H2S5 420 aa14.7□□□□□ -0.06
UBE3A-210ENST00000626068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.06
UBE3A-210ENST00000626068 CACNB1Q02641 598 aaPredicted RBP14.56□□□□□ -0.08
UBE3A-210ENST00000626068 C1QBPQ07021 282 aaKnown RBP14.51□□□□□ -0.09
UBE3A-210ENST00000626068 SLC4A2P04920 1241 aa14.44□□□□□ -0.1
UBE3A-210ENST00000626068 SLC4A1APQ9BWU0 796 aaKnown RBP14.43□□□□□ -0.1
UBE3A-210ENST00000626068 U3KPZ7 1027 aaPredicted RBP14.38□□□□□ -0.11
UBE3A-210ENST00000626068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.1□□□□□ -0.15
UBE3A-210ENST00000626068 HNRNPUL2Q1KMD3 747 aaKnown RBP14.1□□□□□ -0.15
UBE3A-210ENST00000626068 FOXD4L1Q9NU39 408 aa14.1□□□□□ -0.15
UBE3A-210ENST00000626068 MYCNP04198 464 aaPredicted RBP14.07□□□□□ -0.16
UBE3A-210ENST00000626068 SPINK5Q9NQ38 1064 aaPredicted RBP14.07□□□□□ -0.16
UBE3A-210ENST00000626068 CAPN15O75808 1086 aa14.05□□□□□ -0.16
UBE3A-210ENST00000626068 APLP2Q06481 763 aa14.04□□□□□ -0.16
UBE3A-210ENST00000626068 SAMD1Q6SPF0 538 aaPredicted RBP14.03□□□□□ -0.16
UBE3A-210ENST00000626068 ZBTB22O15209 634 aa13.98□□□□□ -0.17
UBE3A-210ENST00000626068 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
UBE3A-210ENST00000626068 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
UBE3A-210ENST00000626068 DSG3P32926 999 aa13.88□□□□□ -0.19
UBE3A-210ENST00000626068 ABCB7O75027 752 aa13.75□□□□□ -0.21
UBE3A-210ENST00000626068 ATF5Q9Y2D1 282 aaPredicted RBP13.71□□□□□ -0.21
UBE3A-210ENST00000626068 EHMT2Q96KQ7 1210 aa13.65□□□□□ -0.22
UBE3A-210ENST00000626068 ATXN8OSP0DMR3 200 aa13.63□□□□□ -0.23
UBE3A-210ENST00000626068 CSRNP3Q8WYN3 585 aa13.63□□□□□ -0.23
UBE3A-210ENST00000626068 POLA2Q14181 598 aa13.59□□□□□ -0.23
UBE3A-210ENST00000626068 ZBTB12Q9Y330 459 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-210ENST00000626068 RBM42Q9BTD8 480 aaKnown RBP13.25□□□□□ -0.29
UBE3A-210ENST00000626068 FBLN2P98095 1184 aa13.17□□□□□ -0.3
UBE3A-210ENST00000626068 OSCARQ8IYS5 282 aa13.15□□□□□ -0.3
UBE3A-210ENST00000626068 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
UBE3A-210ENST00000626068 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
UBE3A-210ENST00000626068 SPDYE2BA6NHP3 402 aa12.97□□□□□ -0.33
UBE3A-210ENST00000626068 SPDYE6P0CI01 402 aa12.97□□□□□ -0.33
UBE3A-210ENST00000626068 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
UBE3A-210ENST00000626068 REM2Q8IYK8 340 aaPredicted RBP12.88□□□□□ -0.35
UBE3A-210ENST00000626068 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
UBE3A-210ENST00000626068 CHRDL2Q6WN34 429 aa12.82□□□□□ -0.36
UBE3A-210ENST00000626068 SSUH2Q9Y2M2 353 aa12.82□□□□□ -0.36
UBE3A-210ENST00000626068 POTEHQ6S545 545 aa12.79□□□□□ -0.36
UBE3A-210ENST00000626068 PITPNM1O00562 1244 aa12.74□□□□□ -0.37
UBE3A-210ENST00000626068 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
UBE3A-210ENST00000626068 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
UBE3A-210ENST00000626068 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
UBE3A-210ENST00000626068 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
UBE3A-210ENST00000626068 PIP4P2Q8N4L2 257 aa12.59□□□□□ -0.39
UBE3A-210ENST00000626068 FXR2P51116 673 aaKnown RBP eCLIP12.57□□□□□ -0.4
UBE3A-210ENST00000626068 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
UBE3A-210ENST00000626068 PRKAR2AP13861 404 aaKnown RBP12.42□□□□□ -0.42
UBE3A-210ENST00000626068 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
UBE3A-210ENST00000626068 PROM2Q8N271 834 aa12.39□□□□□ -0.43
UBE3A-210ENST00000626068 FKBP8Q14318 412 aa12.35□□□□□ -0.43
UBE3A-210ENST00000626068 CHADLQ6NUI6 762 aa12.34□□□□□ -0.43
UBE3A-210ENST00000626068 HAX1O00165 279 aa12.27□□□□□ -0.45
UBE3A-210ENST00000626068 CREBZFQ9NS37 354 aa12.22□□□□□ -0.45
UBE3A-210ENST00000626068 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
UBE3A-210ENST00000626068 C19orf67A6NJJ6 358 aa12.15□□□□□ -0.46
UBE3A-210ENST00000626068 SP7Q8TDD2 431 aaPredicted RBP12.14□□□□□ -0.47
UBE3A-210ENST00000626068 EVX2Q03828 476 aa12.13□□□□□ -0.47
UBE3A-210ENST00000626068 MNX1P50219 401 aaPredicted RBP12.05□□□□□ -0.48
UBE3A-210ENST00000626068 CD44P16070 742 aaKnown RBP12.04□□□□□ -0.48
UBE3A-210ENST00000626068 MIER1Q8N108 512 aa12.04□□□□□ -0.48
UBE3A-210ENST00000626068 NPM1P06748 294 aaKnown RBP eCLIP12.02□□□□□ -0.49
UBE3A-210ENST00000626068 PLEKHG5O94827 1062 aa12.01□□□□□ -0.49
UBE3A-210ENST00000626068 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
UBE3A-210ENST00000626068 PLCD3Q8N3E9 789 aa11.99□□□□□ -0.49
UBE3A-210ENST00000626068 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
UBE3A-210ENST00000626068 PAK3O75914 559 aaPredicted RBP11.91□□□□□ -0.5
UBE3A-210ENST00000626068 GABBR2O75899 941 aa11.89□□□□□ -0.51
UBE3A-210ENST00000626068 ZBTB47Q9UFB7 747 aaPredicted RBP11.88□□□□□ -0.51
UBE3A-210ENST00000626068 ZNF579Q8NAF0 562 aaKnown RBP11.87□□□□□ -0.51
UBE3A-210ENST00000626068 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
UBE3A-210ENST00000626068 CLCN6P51797 869 aa11.82□□□□□ -0.52
UBE3A-210ENST00000626068 TSPYL2Q9H2G4 693 aaPredicted RBP11.81□□□□□ -0.52
UBE3A-210ENST00000626068 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
UBE3A-210ENST00000626068 PHF12Q96QT6 1004 aa11.78□□□□□ -0.52
UBE3A-210ENST00000626068 NUBP1P53384 320 aa11.76□□□□□ -0.53
UBE3A-210ENST00000626068 CCDC61Q9Y6R9 512 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms