RNA–Protein interactions for RNA: ENST00000629252.2

UBE3A-218, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 1,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-218ENST00000629252 NISCHQ9Y2I1 1504 aa51.18■■■■■ 5.78
UBE3A-218ENST00000629252 ABCC9O60706 1549 aa46.28■■■■■ 5
UBE3A-218ENST00000629252 CCDC180Q9P1Z9 1646 aa45.99■■■■■ 4.95
UBE3A-218ENST00000629252 RB1CC1Q8TDY2 1594 aa43.9■■■■■ 4.62
UBE3A-218ENST00000629252 NACADO15069 1562 aa43.5■■■■■ 4.55
UBE3A-218ENST00000629252 DCAF8L2P0C7V8 631 aa43.49■■■■■ 4.55
UBE3A-218ENST00000629252 DNAJC5BQ9UF47 199 aa43.46■■■■■ 4.55
UBE3A-218ENST00000629252 PABPN1Q86U42 306 aaKnown RBP eCLIP43.07■■■■■ 4.49
UBE3A-218ENST00000629252 UNC13AQ9UPW8 1703 aa42.93■■■■■ 4.46
UBE3A-218ENST00000629252 MYO15BQ96JP2 1530 aa42.75■■■■■ 4.43
UBE3A-218ENST00000629252 BICRAQ9NZM4 1560 aa42.59■■■■■ 4.41
UBE3A-218ENST00000629252 ZCCHC6Q5VYS8 1495 aaKnown RBP42.39■■■■■ 4.38
UBE3A-218ENST00000629252 DCAF1Q9Y4B6 1507 aa42.17■■■■■ 4.34
UBE3A-218ENST00000629252 SCRIBQ14160 1630 aa42.05■■■■■ 4.32
UBE3A-218ENST00000629252 SHROOM4Q9ULL8 1493 aa41.92■■■■■ 4.3
UBE3A-218ENST00000629252 CC2D2AQ9P2K1 1620 aa41.74■■■■■ 4.27
UBE3A-218ENST00000629252 CECR2Q9BXF3 1484 aa41.66■■■■■ 4.26
UBE3A-218ENST00000629252 EIF4G1Q04637 1599 aaKnown RBP41.59■■■■■ 4.25
UBE3A-218ENST00000629252 NCAPD3P42695 1498 aa40.13■■■■■ 4.02
UBE3A-218ENST00000629252 ATAD2BQ9ULI0 1458 aa40.05■■■■■ 4
UBE3A-218ENST00000629252 SMARCA4P51532 1647 aa40.01■■■■■ 4
UBE3A-218ENST00000629252 ERCC6Q03468 1493 aa40■■■■□ 3.99
UBE3A-218ENST00000629252 DNAJC5Q9H3Z4 198 aa39.98■■■■□ 3.99
UBE3A-218ENST00000629252 SMARCA2P51531 1590 aa39.94■■■■□ 3.98
UBE3A-218ENST00000629252 HMGXB3Q12766 1538 aa39.86■■■■□ 3.97
UBE3A-218ENST00000629252 CUX2O14529 1486 aa39.84■■■■□ 3.97
UBE3A-218ENST00000629252 BAZ1AQ9NRL2 1556 aaPredicted RBP39.76■■■■□ 3.96
UBE3A-218ENST00000629252 BAZ1BQ9UIG0 1483 aaKnown RBP39.72■■■■□ 3.95
UBE3A-218ENST00000629252 NESP48681 1621 aa39.69■■■■□ 3.94
UBE3A-218ENST00000629252 PEG3Q9GZU2 1588 aa39.51■■■■□ 3.92
UBE3A-218ENST00000629252 MROH2BQ7Z745 1585 aa39.48■■■■□ 3.91
UBE3A-218ENST00000629252 LAMC3Q9Y6N6 1575 aa39.31■■■■□ 3.88
UBE3A-218ENST00000629252 THOC2Q8NI27 1593 aaKnown RBP39.27■■■■□ 3.88
UBE3A-218ENST00000629252 KIF21AQ7Z4S6 1674 aa39.19■■■■□ 3.86
UBE3A-218ENST00000629252 PDS5BQ9NTI5 1447 aa39.1■■■■□ 3.85
UBE3A-218ENST00000629252 WIZO95785 1651 aa39.04■■■■□ 3.84
UBE3A-218ENST00000629252 CADPSQ9ULU8 1353 aa38.95■■■■□ 3.83
UBE3A-218ENST00000629252 MRC2Q9UBG0 1479 aa38.8■■■■□ 3.8
UBE3A-218ENST00000629252 WDR62O43379 1518 aa38.68■■■■□ 3.78
UBE3A-218ENST00000629252 CEP164Q9UPV0 1460 aa38.64■■■■□ 3.78
UBE3A-218ENST00000629252 RSF1Q96T23 1441 aaPredicted RBP38.57■■■■□ 3.77
UBE3A-218ENST00000629252 FANCD2Q9BXW9 1451 aa38.57■■■■□ 3.76
UBE3A-218ENST00000629252 TOP2AP11388 1531 aaKnown RBP38.49■■■■□ 3.75
UBE3A-218ENST00000629252 CFTRP13569 1480 aa38.46■■■■□ 3.75
UBE3A-218ENST00000629252 TRIM41Q8WV44 630 aa38.37■■■■□ 3.73
UBE3A-218ENST00000629252 URB2Q14146 1524 aaKnown RBP38.25■■■■□ 3.71
UBE3A-218ENST00000629252 PRDM2Q13029 1718 aa38.12■■■■□ 3.69
UBE3A-218ENST00000629252 CCDC88BA6NC98 1476 aa38.06■■■■□ 3.68
UBE3A-218ENST00000629252 OSCARQ8IYS5 282 aa38.03■■■■□ 3.68
UBE3A-218ENST00000629252 ZNF608Q9ULD9 1512 aaPredicted RBP37.83■■■■□ 3.65
UBE3A-218ENST00000629252 IFT140Q96RY7 1462 aa37.83■■■■□ 3.65
UBE3A-218ENST00000629252 TOPBP1Q92547 1522 aa37.82■■■■□ 3.64
UBE3A-218ENST00000629252 ABCC8Q09428 1581 aa37.66■■■■□ 3.62
UBE3A-218ENST00000629252 DNMBPQ6XZF7 1577 aa37.66■■■■□ 3.62
UBE3A-218ENST00000629252 EIF4G3O43432 1585 aaKnown RBP37.63■■■■□ 3.62
UBE3A-218ENST00000629252 RIMBP3CA6NJZ7 1639 aa37.6■■■■□ 3.61
UBE3A-218ENST00000629252 RIMBP3BA6NNM3 1639 aa37.6■■■■□ 3.61
UBE3A-218ENST00000629252 RIMBP3Q9UFD9 1639 aa37.6■■■■□ 3.61
UBE3A-218ENST00000629252 AQRO60306 1485 aaKnown RBP eCLIP37.47■■■■□ 3.592e-7■■■■□ 21.4
UBE3A-218ENST00000629252 TARBP1Q13395 1621 aaKnown RBP37.46■■■■□ 3.59
UBE3A-218ENST00000629252 ARHGEF11O15085 1522 aa37.44■■■■□ 3.58
UBE3A-218ENST00000629252 POLA1P09884 1462 aaPredicted RBP37.41■■■■□ 3.58
UBE3A-218ENST00000629252 CHD1O14646 1710 aa37.41■■■■□ 3.58
UBE3A-218ENST00000629252 FBLN2P98095 1184 aa37.37■■■■□ 3.57
UBE3A-218ENST00000629252 RAD54L2Q9Y4B4 1467 aa37.33■■■■□ 3.57
UBE3A-218ENST00000629252 SOGA1O94964 1423 aa37.25■■■■□ 3.55
UBE3A-218ENST00000629252 CYB5RLQ6IPT4 315 aa37.23■■■■□ 3.55
UBE3A-218ENST00000629252 TDRD9Q8NDG6 1382 aaKnown RBP37.23■■■■□ 3.55
UBE3A-218ENST00000629252 FGD5Q6ZNL6 1462 aa37.19■■■■□ 3.54
UBE3A-218ENST00000629252 CUX1P39880 1505 aa37.11■■■■□ 3.53
UBE3A-218ENST00000629252 SNAPC4Q5SXM2 1469 aa37.11■■■■□ 3.53
UBE3A-218ENST00000629252 ARAP1Q96P48 1450 aa37.07■■■■□ 3.52
UBE3A-218ENST00000629252 WDR97A6NE52 1622 aa37.01■■■■□ 3.52
UBE3A-218ENST00000629252 CHMP7Q8WUX9 453 aaPredicted RBP36.98■■■■□ 3.51
UBE3A-218ENST00000629252 SUPT5HO00267 1087 aaKnown RBP36.94■■■■□ 3.5
UBE3A-218ENST00000629252 GRIN2BQ13224 1484 aa36.94■■■■□ 3.5
UBE3A-218ENST00000629252 TRHP20396 242 aaPredicted RBP36.93■■■■□ 3.5
UBE3A-218ENST00000629252 MAGI1Q96QZ7 1491 aaPredicted RBP36.93■■■■□ 3.5
UBE3A-218ENST00000629252 SYNJ1O43426 1573 aa36.9■■■■□ 3.5
UBE3A-218ENST00000629252 CLASP1Q7Z460 1538 aa36.88■■■■□ 3.49
UBE3A-218ENST00000629252 PBRM1Q86U86 1689 aa36.83■■■■□ 3.49
UBE3A-218ENST00000629252 SYNJ2O15056 1496 aa36.82■■■■□ 3.49
UBE3A-218ENST00000629252 GAPVD1Q14C86 1478 aa36.8■■■■□ 3.48
UBE3A-218ENST00000629252 ABCA10Q8WWZ4 1543 aa36.69■■■■□ 3.46
UBE3A-218ENST00000629252 ABCA5Q8WWZ7 1642 aa36.68■■■■□ 3.46
UBE3A-218ENST00000629252 WRNQ14191 1432 aaPredicted RBP eCLIP36.54■■■■□ 3.445e-6■■■■■ 29.2
UBE3A-218ENST00000629252 GRIN2AQ12879 1464 aa36.47■■■■□ 3.43
UBE3A-218ENST00000629252 BIVM-ERCC5R4GMW8 1640 aa36.46■■■■□ 3.43
UBE3A-218ENST00000629252 TOP2BQ02880 1626 aa36.45■■■■□ 3.42
UBE3A-218ENST00000629252 ADAMTS12P58397 1594 aa36.44■■■■□ 3.42
UBE3A-218ENST00000629252 ERCC6L2Q5T890 1561 aa36.36■■■■□ 3.41
UBE3A-218ENST00000629252 CEP170Q5SW79 1584 aa36.36■■■■□ 3.41
UBE3A-218ENST00000629252 FHAD1B1AJZ9 1412 aa36.3■■■■□ 3.4
UBE3A-218ENST00000629252 NUP160Q12769 1436 aa36.3■■■■□ 3.4
UBE3A-218ENST00000629252 ERICH3Q5RHP9 1530 aa36.23■■■■□ 3.39
UBE3A-218ENST00000629252 SHROOM2Q13796 1616 aa36.16■■■■□ 3.38
UBE3A-218ENST00000629252 PRG4Q92954 1404 aaPredicted RBP36.04■■■■□ 3.36
UBE3A-218ENST00000629252 AEBP2Q6ZN18 517 aaPredicted RBP35.97■■■■□ 3.35
UBE3A-218ENST00000629252 JPH4Q96JJ6 628 aa35.96■■■■□ 3.35
UBE3A-218ENST00000629252 RUSC2Q8N2Y8 1516 aa35.93■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms