RNA–Protein interactions for RNA: ENST00000517963.1

RB1CC1-203, Transcript of RB1 inducible coiled-coil 1, humanhuman

TSL 4

Gene RB1CC1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-203ENST00000517963 NISCHQ9Y2I1 1504 aa44.38■■■■■ 4.69
RB1CC1-203ENST00000517963 CCDC180Q9P1Z9 1646 aa39.77■■■■□ 3.96
RB1CC1-203ENST00000517963 ABCC9O60706 1549 aa39.37■■■■□ 3.89
RB1CC1-203ENST00000517963 RB1CC1Q8TDY2 1594 aa37.68■■■■□ 3.62
RB1CC1-203ENST00000517963 NACADO15069 1562 aa37.51■■■■□ 3.59
RB1CC1-203ENST00000517963 DCAF8L2P0C7V8 631 aa37.24■■■■□ 3.55
RB1CC1-203ENST00000517963 MYO15BQ96JP2 1530 aa37.1■■■■□ 3.53
RB1CC1-203ENST00000517963 ZCCHC6Q5VYS8 1495 aaKnown RBP36.86■■■■□ 3.49
RB1CC1-203ENST00000517963 UNC13AQ9UPW8 1703 aa36.82■■■■□ 3.49
RB1CC1-203ENST00000517963 DCAF1Q9Y4B6 1507 aa36.72■■■■□ 3.47
RB1CC1-203ENST00000517963 PABPN1Q86U42 306 aaKnown RBP eCLIP36.65■■■■□ 3.46
RB1CC1-203ENST00000517963 DNAJC5BQ9UF47 199 aa36.58■■■■□ 3.45
RB1CC1-203ENST00000517963 BICRAQ9NZM4 1560 aa36.53■■■■□ 3.44
RB1CC1-203ENST00000517963 SCRIBQ14160 1630 aa36.19■■■■□ 3.38
RB1CC1-203ENST00000517963 SHROOM4Q9ULL8 1493 aa36.16■■■■□ 3.38
RB1CC1-203ENST00000517963 EIF4G1Q04637 1599 aaKnown RBP35.63■■■■□ 3.29
RB1CC1-203ENST00000517963 CC2D2AQ9P2K1 1620 aa35.61■■■■□ 3.29
RB1CC1-203ENST00000517963 CECR2Q9BXF3 1484 aa35.46■■■■□ 3.27
RB1CC1-203ENST00000517963 SMARCA4P51532 1647 aa34.58■■■■□ 3.13
RB1CC1-203ENST00000517963 NCAPD3P42695 1498 aa34.58■■■■□ 3.13
RB1CC1-203ENST00000517963 ATAD2BQ9ULI0 1458 aa34.51■■■■□ 3.11
RB1CC1-203ENST00000517963 SMARCA2P51531 1590 aa34.48■■■■□ 3.11
RB1CC1-203ENST00000517963 BAZ1AQ9NRL2 1556 aaPredicted RBP34.46■■■■□ 3.11
RB1CC1-203ENST00000517963 HMGXB3Q12766 1538 aa34.4■■■■□ 3.1
RB1CC1-203ENST00000517963 PEG3Q9GZU2 1588 aa34.26■■■■□ 3.07
RB1CC1-203ENST00000517963 BAZ1BQ9UIG0 1483 aaKnown RBP34.21■■■■□ 3.07
RB1CC1-203ENST00000517963 MROH2BQ7Z745 1585 aa34.17■■■■□ 3.06
RB1CC1-203ENST00000517963 ERCC6Q03468 1493 aa34.01■■■■□ 3.04
RB1CC1-203ENST00000517963 NESP48681 1621 aa33.9■■■■□ 3.02
RB1CC1-203ENST00000517963 CUX2O14529 1486 aa33.88■■■■□ 3.01
RB1CC1-203ENST00000517963 LAMC3Q9Y6N6 1575 aa33.79■■■■□ 3
RB1CC1-203ENST00000517963 WIZO95785 1651 aa33.79■■■■□ 3
RB1CC1-203ENST00000517963 RSF1Q96T23 1441 aaPredicted RBP33.57■■■□□ 2.96
RB1CC1-203ENST00000517963 PDS5BQ9NTI5 1447 aa33.57■■■□□ 2.96
RB1CC1-203ENST00000517963 THOC2Q8NI27 1593 aaKnown RBP33.55■■■□□ 2.96
RB1CC1-203ENST00000517963 KIF21AQ7Z4S6 1674 aa33.53■■■□□ 2.96
RB1CC1-203ENST00000517963 CADPSQ9ULU8 1353 aa33.53■■■□□ 2.96
RB1CC1-203ENST00000517963 DNAJC5Q9H3Z4 198 aa33.44■■■□□ 2.94
RB1CC1-203ENST00000517963 TOP2AP11388 1531 aaKnown RBP33.42■■■□□ 2.94
RB1CC1-203ENST00000517963 MRC2Q9UBG0 1479 aa33.25■■■□□ 2.91
RB1CC1-203ENST00000517963 CFTRP13569 1480 aa33.23■■■□□ 2.91
RB1CC1-203ENST00000517963 CEP164Q9UPV0 1460 aa33.19■■■□□ 2.9
RB1CC1-203ENST00000517963 WDR62O43379 1518 aa33.18■■■□□ 2.9
RB1CC1-203ENST00000517963 FANCD2Q9BXW9 1451 aa33.16■■■□□ 2.9
RB1CC1-203ENST00000517963 PRDM2Q13029 1718 aa33.01■■■□□ 2.87
RB1CC1-203ENST00000517963 CCDC88BA6NC98 1476 aa32.99■■■□□ 2.87
RB1CC1-203ENST00000517963 URB2Q14146 1524 aaKnown RBP32.85■■■□□ 2.85
RB1CC1-203ENST00000517963 TOPBP1Q92547 1522 aa32.56■■■□□ 2.8
RB1CC1-203ENST00000517963 ABCC8Q09428 1581 aa32.56■■■□□ 2.8
RB1CC1-203ENST00000517963 IFT140Q96RY7 1462 aa32.51■■■□□ 2.79
RB1CC1-203ENST00000517963 DNMBPQ6XZF7 1577 aa32.5■■■□□ 2.79
RB1CC1-203ENST00000517963 ZNF608Q9ULD9 1512 aaPredicted RBP32.37■■■□□ 2.77
RB1CC1-203ENST00000517963 OSCARQ8IYS5 282 aa32.32■■■□□ 2.76
RB1CC1-203ENST00000517963 EIF4G3O43432 1585 aaKnown RBP32.28■■■□□ 2.76
RB1CC1-203ENST00000517963 TARBP1Q13395 1621 aaKnown RBP32.26■■■□□ 2.76
RB1CC1-203ENST00000517963 SUPT5HO00267 1087 aaKnown RBP32.26■■■□□ 2.75
RB1CC1-203ENST00000517963 POLA1P09884 1462 aaPredicted RBP32.25■■■□□ 2.75
RB1CC1-203ENST00000517963 AQRO60306 1485 aaKnown RBP eCLIP32.11■■■□□ 2.73
RB1CC1-203ENST00000517963 CUX1P39880 1505 aa32.1■■■□□ 2.73
RB1CC1-203ENST00000517963 SOGA1O94964 1423 aa32.09■■■□□ 2.73
RB1CC1-203ENST00000517963 FGD5Q6ZNL6 1462 aa32.09■■■□□ 2.73
RB1CC1-203ENST00000517963 RAD54L2Q9Y4B4 1467 aa32.09■■■□□ 2.73
RB1CC1-203ENST00000517963 TRIM41Q8WV44 630 aa32.08■■■□□ 2.73
RB1CC1-203ENST00000517963 WDR97A6NE52 1622 aa32.04■■■□□ 2.72
RB1CC1-203ENST00000517963 CHD1O14646 1710 aa31.98■■■□□ 2.71
RB1CC1-203ENST00000517963 TDRD9Q8NDG6 1382 aaKnown RBP31.96■■■□□ 2.71
RB1CC1-203ENST00000517963 RIMBP3CA6NJZ7 1639 aa31.9■■■□□ 2.7
RB1CC1-203ENST00000517963 RIMBP3BA6NNM3 1639 aa31.9■■■□□ 2.7
RB1CC1-203ENST00000517963 RIMBP3Q9UFD9 1639 aa31.9■■■□□ 2.7
RB1CC1-203ENST00000517963 FBLN2P98095 1184 aa31.84■■■□□ 2.69
RB1CC1-203ENST00000517963 SNAPC4Q5SXM2 1469 aa31.84■■■□□ 2.69
RB1CC1-203ENST00000517963 ARHGEF11O15085 1522 aa31.83■■■□□ 2.69
RB1CC1-203ENST00000517963 GRIN2BQ13224 1484 aa31.81■■■□□ 2.68
RB1CC1-203ENST00000517963 MAGI1Q96QZ7 1491 aaPredicted RBP31.81■■■□□ 2.68
RB1CC1-203ENST00000517963 ABCA10Q8WWZ4 1543 aa31.76■■■□□ 2.68
RB1CC1-203ENST00000517963 PBRM1Q86U86 1689 aa31.74■■■□□ 2.67
RB1CC1-203ENST00000517963 GAPVD1Q14C86 1478 aa31.73■■■□□ 2.67
RB1CC1-203ENST00000517963 BIVM-ERCC5R4GMW8 1640 aa31.71■■■□□ 2.67
RB1CC1-203ENST00000517963 TOP2BQ02880 1626 aa31.7■■■□□ 2.66
RB1CC1-203ENST00000517963 ABCA5Q8WWZ7 1642 aa31.7■■■□□ 2.66
RB1CC1-203ENST00000517963 WRNQ14191 1432 aaPredicted RBP eCLIP31.69■■■□□ 2.66
RB1CC1-203ENST00000517963 SYNJ2O15056 1496 aa31.68■■■□□ 2.66
RB1CC1-203ENST00000517963 CHMP7Q8WUX9 453 aaPredicted RBP31.68■■■□□ 2.66
RB1CC1-203ENST00000517963 SYNJ1O43426 1573 aa31.65■■■□□ 2.66
RB1CC1-203ENST00000517963 CLASP1Q7Z460 1538 aa31.61■■■□□ 2.65
RB1CC1-203ENST00000517963 ARAP1Q96P48 1450 aa31.52■■■□□ 2.64
RB1CC1-203ENST00000517963 CYB5RLQ6IPT4 315 aa31.52■■■□□ 2.64
RB1CC1-203ENST00000517963 ADAMTS12P58397 1594 aa31.44■■■□□ 2.62
RB1CC1-203ENST00000517963 GRIN2AQ12879 1464 aa31.4■■■□□ 2.62
RB1CC1-203ENST00000517963 ERICH3Q5RHP9 1530 aa31.39■■■□□ 2.61
RB1CC1-203ENST00000517963 FHAD1B1AJZ9 1412 aa31.35■■■□□ 2.61
RB1CC1-203ENST00000517963 NUP160Q12769 1436 aa31.28■■■□□ 2.6
RB1CC1-203ENST00000517963 CEP170Q5SW79 1584 aa31.26■■■□□ 2.6
RB1CC1-203ENST00000517963 SHROOM2Q13796 1616 aa31.13■■■□□ 2.57
RB1CC1-203ENST00000517963 TRHP20396 242 aaPredicted RBP31.09■■■□□ 2.57
RB1CC1-203ENST00000517963 ERCC6L2Q5T890 1561 aa31.09■■■□□ 2.57
RB1CC1-203ENST00000517963 KIF27Q86VH2 1401 aa31.08■■■□□ 2.57
RB1CC1-203ENST00000517963 CUL7Q14999 1698 aa31.02■■■□□ 2.56
RB1CC1-203ENST00000517963 RUSC2Q8N2Y8 1516 aa30.99■■■□□ 2.55
RB1CC1-203ENST00000517963 IGF1RP08069 1367 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms