RNA–Protein interactions for RNA: ENST00000630607.2

UBE3A-221, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 1,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-221ENST00000630607 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.86
UBE3A-221ENST00000630607 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
UBE3A-221ENST00000630607 SLC24A1O60721 1099 aa18.35■□□□□ 0.53
UBE3A-221ENST00000630607 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
UBE3A-221ENST00000630607 EHMT2Q96KQ7 1210 aa18.16■□□□□ 0.5
UBE3A-221ENST00000630607 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
UBE3A-221ENST00000630607 PLPPR3Q6T4P5 718 aa17.27■□□□□ 0.36
UBE3A-221ENST00000630607 KCNA4P22459 653 aa17.16■□□□□ 0.34
UBE3A-221ENST00000630607 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
UBE3A-221ENST00000630607 RTN4Q9NQC3 1192 aaKnown RBP17.1■□□□□ 0.33
UBE3A-221ENST00000630607 AMER1Q5JTC6 1135 aaPredicted RBP16.88■□□□□ 0.29
UBE3A-221ENST00000630607 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
UBE3A-221ENST00000630607 NCBP3Q53F19 620 aaKnown RBP16.44■□□□□ 0.22
UBE3A-221ENST00000630607 ADRA2BP18089 450 aa16.31■□□□□ 0.2
UBE3A-221ENST00000630607 DAXXQ9UER7 740 aaPredicted RBP16.08■□□□□ 0.16
UBE3A-221ENST00000630607 FOXD1Q16676 465 aa16.03■□□□□ 0.16
UBE3A-221ENST00000630607 PRKCSHP14314 528 aaPredicted RBP15.97■□□□□ 0.15
UBE3A-221ENST00000630607 ZBTB22O15209 634 aa15.9■□□□□ 0.14
UBE3A-221ENST00000630607 TAOK2Q9UL54 1235 aa15.66■□□□□ 0.1
UBE3A-221ENST00000630607 BCANQ96GW7 911 aa15.59■□□□□ 0.09
UBE3A-221ENST00000630607 PPP6R1Q9UPN7 881 aa15.58■□□□□ 0.08
UBE3A-221ENST00000630607 PLCB2Q00722 1185 aa15.52■□□□□ 0.08
UBE3A-221ENST00000630607 ARXQ96QS3 562 aa15.52■□□□□ 0.08
UBE3A-221ENST00000630607 POTEDQ86YR6 584 aa15.51■□□□□ 0.07
UBE3A-221ENST00000630607 TIMELESSQ9UNS1 1208 aa15.48■□□□□ 0.07
UBE3A-221ENST00000630607 PPP4R3CPQ6ZMV5 832 aa15.48■□□□□ 0.07
UBE3A-221ENST00000630607 NPM3O75607 178 aaKnown RBP15.44■□□□□ 0.06
UBE3A-221ENST00000630607 TPRNQ4KMQ1 711 aa15.37■□□□□ 0.05
UBE3A-221ENST00000630607 FKBP8Q14318 412 aa15.34■□□□□ 0.05
UBE3A-221ENST00000630607 MSH5O43196 834 aa15.31■□□□□ 0.04
UBE3A-221ENST00000630607 HAP1P54257 671 aaPredicted RBP15.3■□□□□ 0.04
UBE3A-221ENST00000630607 TULP1O00294 542 aaPredicted RBP15.29■□□□□ 0.04
UBE3A-221ENST00000630607 FOXD4L1Q9NU39 408 aa15.18■□□□□ 0.02
UBE3A-221ENST00000630607 HOMEZQ8IX15 550 aa15.06■□□□□ 0
UBE3A-221ENST00000630607 VSIG10Q8N0Z9 540 aa15.05■□□□□ -0
UBE3A-221ENST00000630607 GTF3C3Q9Y5Q9 886 aa14.97□□□□□ -0.01
UBE3A-221ENST00000630607 PIAS4Q8N2W9 510 aaPredicted RBP14.93□□□□□ -0.02
UBE3A-221ENST00000630607 NISCHQ9Y2I1 1504 aa14.92□□□□□ -0.02
UBE3A-221ENST00000630607 ERICH6Q7L0X2 663 aa14.82□□□□□ -0.04
UBE3A-221ENST00000630607 KDM2AQ9Y2K7 1162 aa14.82□□□□□ -0.04
UBE3A-221ENST00000630607 RANGAP1P46060 587 aaPredicted RBP14.79□□□□□ -0.04
UBE3A-221ENST00000630607 FBLN2P98095 1184 aa14.68□□□□□ -0.06
UBE3A-221ENST00000630607 TMEM132AQ24JP5 1023 aa14.67□□□□□ -0.06
UBE3A-221ENST00000630607 DCAF8L2P0C7V8 631 aa14.66□□□□□ -0.06
UBE3A-221ENST00000630607 PODXL2Q9NZ53 605 aa14.61□□□□□ -0.07
UBE3A-221ENST00000630607 CNKSR2Q8WXI2 1034 aa14.61□□□□□ -0.07
UBE3A-221ENST00000630607 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
UBE3A-221ENST00000630607 C14orf37Q86TY3 774 aa14.52□□□□□ -0.08
UBE3A-221ENST00000630607 ATXN8OSP0DMR3 200 aa14.41□□□□□ -0.1
UBE3A-221ENST00000630607 KLHL34Q8N239 644 aa14.38□□□□□ -0.11
UBE3A-221ENST00000630607 APLP2Q06481 763 aa14.36□□□□□ -0.11
UBE3A-221ENST00000630607 PAXIP1Q6ZW49 1069 aaPredicted RBP14.32□□□□□ -0.12
UBE3A-221ENST00000630607 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.31□□□□□ -0.12
UBE3A-221ENST00000630607 BBXQ8WY36 941 aaPredicted RBP14.27□□□□□ -0.13
UBE3A-221ENST00000630607 CFAP44Q96MT7 982 aa14.27□□□□□ -0.13
UBE3A-221ENST00000630607 PKD2Q13563 968 aa14.26□□□□□ -0.13
UBE3A-221ENST00000630607 NBR1Q14596 966 aa14.25□□□□□ -0.13
UBE3A-221ENST00000630607 NPM2Q86SE8 214 aaKnown RBP14.23□□□□□ -0.13
UBE3A-221ENST00000630607 TSHZ2Q9NRE2 1034 aa14.21□□□□□ -0.14
UBE3A-221ENST00000630607 SUPT5HO00267 1087 aaKnown RBP14.19□□□□□ -0.14
UBE3A-221ENST00000630607 FBXO3Q9UK99 471 aa14.16□□□□□ -0.14
UBE3A-221ENST00000630607 SLC4A2P04920 1241 aa14.16□□□□□ -0.14
UBE3A-221ENST00000630607 NPM1P06748 294 aaKnown RBP eCLIP14.15□□□□□ -0.14
UBE3A-221ENST00000630607 TRIM26Q12899 539 aaPredicted RBP14.1□□□□□ -0.15
UBE3A-221ENST00000630607 PELP1Q8IZL8 1130 aaKnown RBP14.1□□□□□ -0.15
UBE3A-221ENST00000630607 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
UBE3A-221ENST00000630607 IFNLR1Q8IU57 520 aaPredicted RBP14.06□□□□□ -0.16
UBE3A-221ENST00000630607 VASPP50552 380 aaPredicted RBP14.05□□□□□ -0.16
UBE3A-221ENST00000630607 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
UBE3A-221ENST00000630607 UBTFP17480 764 aaKnown RBP14.03□□□□□ -0.16
UBE3A-221ENST00000630607 TTBK1Q5TCY1 1321 aaPredicted RBP14.02□□□□□ -0.17
UBE3A-221ENST00000630607 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
UBE3A-221ENST00000630607 SPRYD3Q8NCJ5 442 aa14□□□□□ -0.17
UBE3A-221ENST00000630607 HRCP23327 699 aa13.94□□□□□ -0.18
UBE3A-221ENST00000630607 RNF216Q9NWF9 866 aaPredicted RBP13.91□□□□□ -0.18
UBE3A-221ENST00000630607 MYT1Q01538 1121 aa13.87□□□□□ -0.19
UBE3A-221ENST00000630607 ATF5Q9Y2D1 282 aaPredicted RBP13.78□□□□□ -0.2
UBE3A-221ENST00000630607 ECM2O94769 699 aaPredicted RBP13.76□□□□□ -0.21
UBE3A-221ENST00000630607 MAPK8IP2Q13387 824 aaPredicted RBP13.7□□□□□ -0.22
UBE3A-221ENST00000630607 PROM2Q8N271 834 aa13.69□□□□□ -0.22
UBE3A-221ENST00000630607 RGL2O15211 777 aa13.67□□□□□ -0.22
UBE3A-221ENST00000630607 BRPF1P55201 1214 aaPredicted RBP13.66□□□□□ -0.22
UBE3A-221ENST00000630607 SPDYE4A6NLX3 237 aa13.65□□□□□ -0.22
UBE3A-221ENST00000630607 DMRT2Q9Y5R5 561 aa13.59□□□□□ -0.23
UBE3A-221ENST00000630607 CHGAP10645 457 aaKnown RBP13.55□□□□□ -0.24
UBE3A-221ENST00000630607 TRHP20396 242 aaPredicted RBP13.54□□□□□ -0.24
UBE3A-221ENST00000630607 LOC105371045A0A1W2PR82 267 aa13.52□□□□□ -0.25
UBE3A-221ENST00000630607 CCDC9Q9Y3X0 531 aaKnown RBP13.49□□□□□ -0.25
UBE3A-221ENST00000630607 SPOCK2Q92563 424 aa13.48□□□□□ -0.25
UBE3A-221ENST00000630607 EIF5BO60841 1220 aaKnown RBP13.45□□□□□ -0.26
UBE3A-221ENST00000630607 HOXD11P31277 338 aaPredicted RBP13.43□□□□□ -0.26
UBE3A-221ENST00000630607 ARID3AQ99856 593 aa13.41□□□□□ -0.26
UBE3A-221ENST00000630607 ZMYND15Q9H091 742 aa13.4□□□□□ -0.26
UBE3A-221ENST00000630607 NEUROD2Q15784 382 aa13.39□□□□□ -0.27
UBE3A-221ENST00000630607 CACNB1Q02641 598 aaPredicted RBP13.38□□□□□ -0.27
UBE3A-221ENST00000630607 RSPH6AQ9H0K4 717 aa13.38□□□□□ -0.27
UBE3A-221ENST00000630607 LMOD2Q6P5Q4 547 aa13.36□□□□□ -0.27
UBE3A-221ENST00000630607 ZBTB7CA1YPR0 619 aa13.35□□□□□ -0.27
UBE3A-221ENST00000630607 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.32□□□□□ -0.28
UBE3A-221ENST00000630607 C1orf115Q9H7X2 142 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms