RNA–Protein interactions for RNA: ENST00000628890.1

UBE3A-217, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 424 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-217ENST00000628890 AEBP2Q6ZN18 517 aaPredicted RBP28.06■■■□□ 2.08
UBE3A-217ENST00000628890 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
UBE3A-217ENST00000628890 SENP3Q9H4L4 574 aaPredicted RBP23.91■■□□□ 1.42
UBE3A-217ENST00000628890 PHF23Q9BUL5 403 aaPredicted RBP23.62■■□□□ 1.37
UBE3A-217ENST00000628890 FOXD1Q16676 465 aa22.31■■□□□ 1.16
UBE3A-217ENST00000628890 PLPPR3Q6T4P5 718 aa21.22■□□□□ 0.99
UBE3A-217ENST00000628890 MSH5O43196 834 aa20.88■□□□□ 0.93
UBE3A-217ENST00000628890 PPP6R1Q9UPN7 881 aa20.85■□□□□ 0.93
UBE3A-217ENST00000628890 PIAS4Q8N2W9 510 aaPredicted RBP20.76■□□□□ 0.91
UBE3A-217ENST00000628890 ADRA2BP18089 450 aa20.73■□□□□ 0.91
UBE3A-217ENST00000628890 POTEDQ86YR6 584 aa20.44■□□□□ 0.86
UBE3A-217ENST00000628890 MAPK8IP2Q13387 824 aaPredicted RBP19.07■□□□□ 0.64
UBE3A-217ENST00000628890 SCAF1Q9H7N4 1312 aaKnown RBP18.99■□□□□ 0.63
UBE3A-217ENST00000628890 DMRT2Q9Y5R5 561 aa18.98■□□□□ 0.63
UBE3A-217ENST00000628890 PPP4R3CPQ6ZMV5 832 aa18.59■□□□□ 0.57
UBE3A-217ENST00000628890 HOXD11P31277 338 aaPredicted RBP18.31■□□□□ 0.52
UBE3A-217ENST00000628890 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.52
UBE3A-217ENST00000628890 RNF216Q9NWF9 866 aaPredicted RBP18.14■□□□□ 0.49
UBE3A-217ENST00000628890 DCAF8L1A6NGE4 600 aa18.04■□□□□ 0.48
UBE3A-217ENST00000628890 CACNB1Q02641 598 aaPredicted RBP17.88■□□□□ 0.45
UBE3A-217ENST00000628890 NCBP3Q53F19 620 aaKnown RBP17.85■□□□□ 0.45
UBE3A-217ENST00000628890 RNF39Q9H2S5 420 aa17.85■□□□□ 0.45
UBE3A-217ENST00000628890 DNAJC5BQ9UF47 199 aa17.77■□□□□ 0.44
UBE3A-217ENST00000628890 NPM3O75607 178 aaKnown RBP17.61■□□□□ 0.41
UBE3A-217ENST00000628890 C1QBPQ07021 282 aaKnown RBP17.58■□□□□ 0.4
UBE3A-217ENST00000628890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.32■□□□□ 0.36
UBE3A-217ENST00000628890 KCNA4P22459 653 aa17.21■□□□□ 0.35
UBE3A-217ENST00000628890 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
UBE3A-217ENST00000628890 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
UBE3A-217ENST00000628890 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
UBE3A-217ENST00000628890 DSG3P32926 999 aa16.69■□□□□ 0.26
UBE3A-217ENST00000628890 CAPN15O75808 1086 aa16.67■□□□□ 0.26
UBE3A-217ENST00000628890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
UBE3A-217ENST00000628890 APLP2Q06481 763 aa16.51■□□□□ 0.23
UBE3A-217ENST00000628890 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
UBE3A-217ENST00000628890 ZNF219Q9P2Y4 722 aaPredicted RBP16.42■□□□□ 0.22
UBE3A-217ENST00000628890 SAMD1Q6SPF0 538 aaPredicted RBP16.41■□□□□ 0.22
UBE3A-217ENST00000628890 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
UBE3A-217ENST00000628890 ABCB7O75027 752 aa16.27■□□□□ 0.2
UBE3A-217ENST00000628890 MYCNP04198 464 aaPredicted RBP16.27■□□□□ 0.2
UBE3A-217ENST00000628890 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
UBE3A-217ENST00000628890 FOXD4L1Q9NU39 408 aa16.08■□□□□ 0.16
UBE3A-217ENST00000628890 POLA2Q14181 598 aa16.01■□□□□ 0.15
UBE3A-217ENST00000628890 POTEHQ6S545 545 aa16■□□□□ 0.15
UBE3A-217ENST00000628890 ATF5Q9Y2D1 282 aaPredicted RBP15.92■□□□□ 0.14
UBE3A-217ENST00000628890 RBM42Q9BTD8 480 aaKnown RBP15.88■□□□□ 0.13
UBE3A-217ENST00000628890 ZBTB22O15209 634 aa15.85■□□□□ 0.13
UBE3A-217ENST00000628890 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
UBE3A-217ENST00000628890 ATXN8OSP0DMR3 200 aa15.67■□□□□ 0.1
UBE3A-217ENST00000628890 CHRDL2Q6WN34 429 aa15.55■□□□□ 0.08
UBE3A-217ENST00000628890 AKT1S1Q96B36 256 aa15.54■□□□□ 0.08
UBE3A-217ENST00000628890 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
UBE3A-217ENST00000628890 REM2Q8IYK8 340 aaPredicted RBP15.38■□□□□ 0.05
UBE3A-217ENST00000628890 FBLN2P98095 1184 aa15.24■□□□□ 0.03
UBE3A-217ENST00000628890 SPDYE2BA6NHP3 402 aa15.21■□□□□ 0.03
UBE3A-217ENST00000628890 SPDYE6P0CI01 402 aa15.21■□□□□ 0.03
UBE3A-217ENST00000628890 SPDYE2Q495Y8 402 aa15.21■□□□□ 0.03
UBE3A-217ENST00000628890 MKRN4PQ13434 485 aaPredicted RBP15.2■□□□□ 0.02
UBE3A-217ENST00000628890 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
UBE3A-217ENST00000628890 PIP4P2Q8N4L2 257 aa15.18■□□□□ 0.02
UBE3A-217ENST00000628890 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.01
UBE3A-217ENST00000628890 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
UBE3A-217ENST00000628890 SSUH2Q9Y2M2 353 aa15.03■□□□□ -0
UBE3A-217ENST00000628890 ZNF692Q9BU19 519 aaPredicted RBP14.99□□□□□ -0.01
UBE3A-217ENST00000628890 SP7Q8TDD2 431 aaPredicted RBP14.98□□□□□ -0.01
UBE3A-217ENST00000628890 SPDYE1Q8NFV5 336 aaPredicted RBP14.93□□□□□ -0.02
UBE3A-217ENST00000628890 HAX1O00165 279 aa14.87□□□□□ -0.03
UBE3A-217ENST00000628890 CLEC11AQ9Y240 323 aa14.83□□□□□ -0.04
UBE3A-217ENST00000628890 PRKAR2AP13861 404 aaKnown RBP14.78□□□□□ -0.04
UBE3A-217ENST00000628890 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
UBE3A-217ENST00000628890 EVX2Q03828 476 aa14.75□□□□□ -0.05
UBE3A-217ENST00000628890 EHMT2Q96KQ7 1210 aa14.73□□□□□ -0.05
UBE3A-217ENST00000628890 C19orf67A6NJJ6 358 aa14.65□□□□□ -0.06
UBE3A-217ENST00000628890 PRR29P0C7W0 189 aa14.64□□□□□ -0.07
UBE3A-217ENST00000628890 CHADLQ6NUI6 762 aa14.59□□□□□ -0.07
UBE3A-217ENST00000628890 FARP1Q9Y4F1 1045 aaPredicted RBP14.42□□□□□ -0.1
UBE3A-217ENST00000628890 SPDYE4A6NLX3 237 aa14.41□□□□□ -0.1
UBE3A-217ENST00000628890 GABBR2O75899 941 aa14.41□□□□□ -0.1
UBE3A-217ENST00000628890 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
UBE3A-217ENST00000628890 CREBZFQ9NS37 354 aa14.32□□□□□ -0.12
UBE3A-217ENST00000628890 CD44P16070 742 aaKnown RBP14.3□□□□□ -0.12
UBE3A-217ENST00000628890 CLCN6P51797 869 aa14.24□□□□□ -0.13
UBE3A-217ENST00000628890 PROM2Q8N271 834 aa14.17□□□□□ -0.14
UBE3A-217ENST00000628890 ZNF579Q8NAF0 562 aaKnown RBP14.14□□□□□ -0.15
UBE3A-217ENST00000628890 POTEIP0CG38 1075 aa14.13□□□□□ -0.15
UBE3A-217ENST00000628890 MNX1P50219 401 aaPredicted RBP14.11□□□□□ -0.15
UBE3A-217ENST00000628890 ZRANB1Q9UGI0 708 aa14.09□□□□□ -0.15
UBE3A-217ENST00000628890 LHX8Q68G74 356 aa14.05□□□□□ -0.16
UBE3A-217ENST00000628890 NPM1P06748 294 aaKnown RBP eCLIP14.02□□□□□ -0.17
UBE3A-217ENST00000628890 DCBLD2Q96PD2 775 aa13.95□□□□□ -0.18
UBE3A-217ENST00000628890 PAK3O75914 559 aaPredicted RBP13.94□□□□□ -0.18
UBE3A-217ENST00000628890 GALR2O43603 387 aaPredicted RBP13.93□□□□□ -0.18
UBE3A-217ENST00000628890 PHF12Q96QT6 1004 aa13.89□□□□□ -0.19
UBE3A-217ENST00000628890 CCDC61Q9Y6R9 512 aa13.74□□□□□ -0.21
UBE3A-217ENST00000628890 MIER1Q8N108 512 aa13.73□□□□□ -0.21
UBE3A-217ENST00000628890 MS4A3Q96HJ5 214 aa13.72□□□□□ -0.21
UBE3A-217ENST00000628890 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
UBE3A-217ENST00000628890 ASTLQ6HA08 431 aaPredicted RBP13.7□□□□□ -0.22
UBE3A-217ENST00000628890 PELP1Q8IZL8 1130 aaKnown RBP13.7□□□□□ -0.22
UBE3A-217ENST00000628890 PLEKHG5O94827 1062 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms