Protein–RNA interactions for Protein: Q8IWR1

TRIM59, Tripartite motif-containing protein 59, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59Q8IWR1 AC100797.4-201ENST00000631653 1827 ntBASIC28.01■■■□□ 2.07
TRIM59Q8IWR1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
TRIM59Q8IWR1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TRIM59Q8IWR1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28■■■□□ 2.07
TRIM59Q8IWR1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28■■■□□ 2.07
TRIM59Q8IWR1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TRIM59Q8IWR1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
TRIM59Q8IWR1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TRIM59Q8IWR1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TRIM59Q8IWR1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.98■■■□□ 2.07
TRIM59Q8IWR1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
TRIM59Q8IWR1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
TRIM59Q8IWR1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.97■■■□□ 2.07
TRIM59Q8IWR1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
TRIM59Q8IWR1 AL162393.1-201ENST00000437852 946 ntBASIC27.97■■■□□ 2.07
TRIM59Q8IWR1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.97■■■□□ 2.07
TRIM59Q8IWR1 AC087741.3-201ENST00000624270 1347 ntBASIC27.96■■■□□ 2.07
TRIM59Q8IWR1 AC135983.2-203ENST00000454486 1613 ntBASIC27.96■■■□□ 2.07
TRIM59Q8IWR1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
TRIM59Q8IWR1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
TRIM59Q8IWR1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
TRIM59Q8IWR1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
TRIM59Q8IWR1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.95■■■□□ 2.06
TRIM59Q8IWR1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
TRIM59Q8IWR1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
TRIM59Q8IWR1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.94■■■□□ 2.06
TRIM59Q8IWR1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.94■■■□□ 2.06
TRIM59Q8IWR1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
TRIM59Q8IWR1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
TRIM59Q8IWR1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.93■■■□□ 2.06
TRIM59Q8IWR1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.93■■■□□ 2.06
TRIM59Q8IWR1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
TRIM59Q8IWR1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
TRIM59Q8IWR1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
TRIM59Q8IWR1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.92■■■□□ 2.06
TRIM59Q8IWR1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
TRIM59Q8IWR1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
TRIM59Q8IWR1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
TRIM59Q8IWR1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.9■■■□□ 2.06
TRIM59Q8IWR1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
TRIM59Q8IWR1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.9■■■□□ 2.06
TRIM59Q8IWR1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
TRIM59Q8IWR1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
TRIM59Q8IWR1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
TRIM59Q8IWR1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
TRIM59Q8IWR1 LINC00273-201ENST00000539813 1452 ntBASIC27.89■■■□□ 2.05
TRIM59Q8IWR1 WHAMMP2-203ENST00000563942 1603 ntBASIC27.89■■■□□ 2.05
TRIM59Q8IWR1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
TRIM59Q8IWR1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.88■■■□□ 2.05
TRIM59Q8IWR1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
TRIM59Q8IWR1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
TRIM59Q8IWR1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
TRIM59Q8IWR1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.87■■■□□ 2.05
TRIM59Q8IWR1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
TRIM59Q8IWR1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
TRIM59Q8IWR1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
TRIM59Q8IWR1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.86■■■□□ 2.05
TRIM59Q8IWR1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
TRIM59Q8IWR1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
TRIM59Q8IWR1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
TRIM59Q8IWR1 BX255925.1-201ENST00000566954 1854 ntBASIC27.84■■■□□ 2.05
TRIM59Q8IWR1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TRIM59Q8IWR1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
TRIM59Q8IWR1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TRIM59Q8IWR1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.82■■■□□ 2.04
TRIM59Q8IWR1 AP002414.2-202ENST00000590929 1450 ntBASIC27.82■■■□□ 2.04
TRIM59Q8IWR1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
TRIM59Q8IWR1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.81■■■□□ 2.04
TRIM59Q8IWR1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
TRIM59Q8IWR1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
TRIM59Q8IWR1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.81■■■□□ 2.04
TRIM59Q8IWR1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.8■■■□□ 2.04
TRIM59Q8IWR1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
TRIM59Q8IWR1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
TRIM59Q8IWR1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
TRIM59Q8IWR1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
TRIM59Q8IWR1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
TRIM59Q8IWR1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.79■■■□□ 2.04
TRIM59Q8IWR1 AC044849.2-201ENST00000606596 710 ntBASIC27.79■■■□□ 2.04
TRIM59Q8IWR1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
TRIM59Q8IWR1 LINC01003-201ENST00000564834 1764 ntBASIC27.78■■■□□ 2.04
TRIM59Q8IWR1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
TRIM59Q8IWR1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TRIM59Q8IWR1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.78■■■□□ 2.04
TRIM59Q8IWR1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TRIM59Q8IWR1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
TRIM59Q8IWR1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.77■■■□□ 2.04
TRIM59Q8IWR1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
TRIM59Q8IWR1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
TRIM59Q8IWR1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.77■■■□□ 2.04
TRIM59Q8IWR1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.76■■■□□ 2.04
TRIM59Q8IWR1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.76■■■□□ 2.03
TRIM59Q8IWR1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
TRIM59Q8IWR1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
TRIM59Q8IWR1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TRIM59Q8IWR1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TRIM59Q8IWR1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.74■■■□□ 2.03
TRIM59Q8IWR1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TRIM59Q8IWR1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TRIM59Q8IWR1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms