Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RFX6Q8HWS3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.65■■□□□ 1.86
RFX6Q8HWS3 MIR6090-201ENST00000622481 60 ntBASIC26.64■■□□□ 1.86
RFX6Q8HWS3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
RFX6Q8HWS3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
RFX6Q8HWS3 AP006261.1-201ENST00000584783 668 ntBASIC26.63■■□□□ 1.85
RFX6Q8HWS3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.63■■□□□ 1.85
RFX6Q8HWS3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.62■■□□□ 1.85
RFX6Q8HWS3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
RFX6Q8HWS3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RFX6Q8HWS3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
RFX6Q8HWS3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RFX6Q8HWS3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RFX6Q8HWS3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.6■■□□□ 1.85
RFX6Q8HWS3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.59■■□□□ 1.85
RFX6Q8HWS3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RFX6Q8HWS3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RFX6Q8HWS3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RFX6Q8HWS3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RFX6Q8HWS3 AC100797.4-201ENST00000631653 1827 ntBASIC26.58■■□□□ 1.85
RFX6Q8HWS3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RFX6Q8HWS3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.58■■□□□ 1.85
RFX6Q8HWS3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
RFX6Q8HWS3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RFX6Q8HWS3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RFX6Q8HWS3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RFX6Q8HWS3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
RFX6Q8HWS3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RFX6Q8HWS3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RFX6Q8HWS3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.56■■□□□ 1.84
RFX6Q8HWS3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFX6Q8HWS3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFX6Q8HWS3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFX6Q8HWS3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFX6Q8HWS3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RFX6Q8HWS3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.54■■□□□ 1.84
RFX6Q8HWS3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RFX6Q8HWS3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RFX6Q8HWS3 AL162393.1-201ENST00000437852 946 ntBASIC26.53■■□□□ 1.84
RFX6Q8HWS3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RFX6Q8HWS3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.53■■□□□ 1.84
RFX6Q8HWS3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.53■■□□□ 1.84
RFX6Q8HWS3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.52■■□□□ 1.84
RFX6Q8HWS3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.52■■□□□ 1.84
RFX6Q8HWS3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RFX6Q8HWS3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
RFX6Q8HWS3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.84
RFX6Q8HWS3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
RFX6Q8HWS3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RFX6Q8HWS3 AC087741.3-201ENST00000624270 1347 ntBASIC26.51■■□□□ 1.83
RFX6Q8HWS3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RFX6Q8HWS3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RFX6Q8HWS3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
RFX6Q8HWS3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RFX6Q8HWS3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.49■■□□□ 1.83
RFX6Q8HWS3 AC135983.2-203ENST00000454486 1613 ntBASIC26.49■■□□□ 1.83
RFX6Q8HWS3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RFX6Q8HWS3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
RFX6Q8HWS3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
RFX6Q8HWS3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RFX6Q8HWS3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.47■■□□□ 1.83
RFX6Q8HWS3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RFX6Q8HWS3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RFX6Q8HWS3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.46■■□□□ 1.83
RFX6Q8HWS3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.46■■□□□ 1.83
RFX6Q8HWS3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RFX6Q8HWS3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.46■■□□□ 1.83
RFX6Q8HWS3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.46■■□□□ 1.83
RFX6Q8HWS3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.46■■□□□ 1.83
RFX6Q8HWS3 WHAMMP2-203ENST00000563942 1603 ntBASIC26.46■■□□□ 1.83
RFX6Q8HWS3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
RFX6Q8HWS3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.45■■□□□ 1.82
RFX6Q8HWS3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.45■■□□□ 1.82
RFX6Q8HWS3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
RFX6Q8HWS3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.43■■□□□ 1.82
RFX6Q8HWS3 LINC00273-201ENST00000539813 1452 ntBASIC26.43■■□□□ 1.82
RFX6Q8HWS3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RFX6Q8HWS3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
RFX6Q8HWS3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RFX6Q8HWS3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
RFX6Q8HWS3 AC044849.2-201ENST00000606596 710 ntBASIC26.42■■□□□ 1.82
RFX6Q8HWS3 BX255925.1-201ENST00000566954 1854 ntBASIC26.41■■□□□ 1.82
RFX6Q8HWS3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
RFX6Q8HWS3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RFX6Q8HWS3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RFX6Q8HWS3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RFX6Q8HWS3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RFX6Q8HWS3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
RFX6Q8HWS3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RFX6Q8HWS3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
RFX6Q8HWS3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.38■■□□□ 1.81
RFX6Q8HWS3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RFX6Q8HWS3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RFX6Q8HWS3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RFX6Q8HWS3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RFX6Q8HWS3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RFX6Q8HWS3 AP002414.2-202ENST00000590929 1450 ntBASIC26.37■■□□□ 1.81
RFX6Q8HWS3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
RFX6Q8HWS3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RFX6Q8HWS3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms