Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.47■■■□□ 2.63
TTC39AQ5SRH9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TTC39AQ5SRH9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
TTC39AQ5SRH9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TTC39AQ5SRH9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.45■■■□□ 2.63
TTC39AQ5SRH9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.45■■■□□ 2.63
TTC39AQ5SRH9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.45■■■□□ 2.63
TTC39AQ5SRH9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
TTC39AQ5SRH9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TTC39AQ5SRH9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
TTC39AQ5SRH9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TTC39AQ5SRH9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
TTC39AQ5SRH9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
TTC39AQ5SRH9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
TTC39AQ5SRH9 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.39■■■□□ 2.62
TTC39AQ5SRH9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.39■■■□□ 2.62
TTC39AQ5SRH9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
TTC39AQ5SRH9 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.39■■■□□ 2.61
TTC39AQ5SRH9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
TTC39AQ5SRH9 MIR639-201ENST00000384974 98 ntBASIC31.38■■■□□ 2.61
TTC39AQ5SRH9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TTC39AQ5SRH9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TTC39AQ5SRH9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TTC39AQ5SRH9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TTC39AQ5SRH9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TTC39AQ5SRH9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.37■■■□□ 2.61
TTC39AQ5SRH9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
TTC39AQ5SRH9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
TTC39AQ5SRH9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TTC39AQ5SRH9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TTC39AQ5SRH9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TTC39AQ5SRH9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.36■■■□□ 2.61
TTC39AQ5SRH9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.35■■■□□ 2.61
TTC39AQ5SRH9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
TTC39AQ5SRH9 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
TTC39AQ5SRH9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
TTC39AQ5SRH9 AL139393.2-201ENST00000608721 2025 ntBASIC31.34■■■□□ 2.61
TTC39AQ5SRH9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TTC39AQ5SRH9 AP004833.2-201ENST00000532228 1454 ntBASIC31.33■■■□□ 2.61
TTC39AQ5SRH9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TTC39AQ5SRH9 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.33■■■□□ 2.61
TTC39AQ5SRH9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.33■■■□□ 2.61
TTC39AQ5SRH9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TTC39AQ5SRH9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
TTC39AQ5SRH9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TTC39AQ5SRH9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.31■■■□□ 2.6
TTC39AQ5SRH9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.31■■■□□ 2.6
TTC39AQ5SRH9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TTC39AQ5SRH9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TTC39AQ5SRH9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.3■■■□□ 2.6
TTC39AQ5SRH9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TTC39AQ5SRH9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
TTC39AQ5SRH9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.28■■■□□ 2.6
TTC39AQ5SRH9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TTC39AQ5SRH9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.27■■■□□ 2.6
TTC39AQ5SRH9 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TTC39AQ5SRH9 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TTC39AQ5SRH9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.6
TTC39AQ5SRH9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.25■■■□□ 2.59
TTC39AQ5SRH9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.25■■■□□ 2.59
TTC39AQ5SRH9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TTC39AQ5SRH9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TTC39AQ5SRH9 MIR4449-201ENST00000578365 66 ntBASIC31.24■■■□□ 2.59
TTC39AQ5SRH9 AC110285.7-201ENST00000624417 1536 ntBASIC31.24■■■□□ 2.59
TTC39AQ5SRH9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
TTC39AQ5SRH9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.21■■■□□ 2.59
TTC39AQ5SRH9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.21■■■□□ 2.59
TTC39AQ5SRH9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
TTC39AQ5SRH9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TTC39AQ5SRH9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.21■■■□□ 2.59
TTC39AQ5SRH9 AC100797.4-201ENST00000631653 1827 ntBASIC31.21■■■□□ 2.59
TTC39AQ5SRH9 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TTC39AQ5SRH9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.21■■■□□ 2.59
TTC39AQ5SRH9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.2■■■□□ 2.58
TTC39AQ5SRH9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.2■■■□□ 2.58
TTC39AQ5SRH9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
TTC39AQ5SRH9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.18■■■□□ 2.58
TTC39AQ5SRH9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TTC39AQ5SRH9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
TTC39AQ5SRH9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
TTC39AQ5SRH9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.17■■■□□ 2.58
TTC39AQ5SRH9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
TTC39AQ5SRH9 ABCB10P3-201ENST00000561950 2166 ntBASIC31.16■■■□□ 2.58
TTC39AQ5SRH9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
TTC39AQ5SRH9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.15■■■□□ 2.58
TTC39AQ5SRH9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
TTC39AQ5SRH9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TTC39AQ5SRH9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
TTC39AQ5SRH9 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TTC39AQ5SRH9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.14■■■□□ 2.58
TTC39AQ5SRH9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TTC39AQ5SRH9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TTC39AQ5SRH9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
TTC39AQ5SRH9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TTC39AQ5SRH9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.12■■■□□ 2.57
TTC39AQ5SRH9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.12■■■□□ 2.57
TTC39AQ5SRH9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
TTC39AQ5SRH9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.11■■■□□ 2.57
TTC39AQ5SRH9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
TTC39AQ5SRH9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.1■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms