Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.23■■■□□ 2.59
PDS5AQ29RF7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PDS5AQ29RF7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.22■■■□□ 2.59
PDS5AQ29RF7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
PDS5AQ29RF7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PDS5AQ29RF7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PDS5AQ29RF7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
PDS5AQ29RF7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
PDS5AQ29RF7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.2■■■□□ 2.59
PDS5AQ29RF7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.2■■■□□ 2.58
PDS5AQ29RF7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.19■■■□□ 2.58
PDS5AQ29RF7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PDS5AQ29RF7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
PDS5AQ29RF7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PDS5AQ29RF7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.18■■■□□ 2.58
PDS5AQ29RF7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PDS5AQ29RF7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.18■■■□□ 2.58
PDS5AQ29RF7 AP004833.2-201ENST00000532228 1454 ntBASIC31.18■■■□□ 2.58
PDS5AQ29RF7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PDS5AQ29RF7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PDS5AQ29RF7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
PDS5AQ29RF7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.16■■■□□ 2.58
PDS5AQ29RF7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.15■■■□□ 2.58
PDS5AQ29RF7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
PDS5AQ29RF7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
PDS5AQ29RF7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PDS5AQ29RF7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
PDS5AQ29RF7 AC008813.1-201ENST00000536597 885 ntBASIC31.15■■■□□ 2.58
PDS5AQ29RF7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
PDS5AQ29RF7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
PDS5AQ29RF7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
PDS5AQ29RF7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
PDS5AQ29RF7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
PDS5AQ29RF7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PDS5AQ29RF7 HSD17B1P1-201ENST00000590052 955 ntBASIC31.14■■■□□ 2.58
PDS5AQ29RF7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
PDS5AQ29RF7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.14■■■□□ 2.57
PDS5AQ29RF7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
PDS5AQ29RF7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.12■■■□□ 2.57
PDS5AQ29RF7 AC110285.7-201ENST00000624417 1536 ntBASIC31.11■■■□□ 2.57
PDS5AQ29RF7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PDS5AQ29RF7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.11■■■□□ 2.57
PDS5AQ29RF7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
PDS5AQ29RF7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PDS5AQ29RF7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PDS5AQ29RF7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
PDS5AQ29RF7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PDS5AQ29RF7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.09■■■□□ 2.57
PDS5AQ29RF7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PDS5AQ29RF7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.08■■■□□ 2.57
PDS5AQ29RF7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PDS5AQ29RF7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
PDS5AQ29RF7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
PDS5AQ29RF7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
PDS5AQ29RF7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
PDS5AQ29RF7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PDS5AQ29RF7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
PDS5AQ29RF7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.06■■■□□ 2.56
PDS5AQ29RF7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PDS5AQ29RF7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PDS5AQ29RF7 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.05■■■□□ 2.56
PDS5AQ29RF7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.05■■■□□ 2.56
PDS5AQ29RF7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
PDS5AQ29RF7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
PDS5AQ29RF7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
PDS5AQ29RF7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.04■■■□□ 2.56
PDS5AQ29RF7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
PDS5AQ29RF7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PDS5AQ29RF7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PDS5AQ29RF7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
PDS5AQ29RF7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
PDS5AQ29RF7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.02■■■□□ 2.56
PDS5AQ29RF7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
PDS5AQ29RF7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PDS5AQ29RF7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PDS5AQ29RF7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31■■■□□ 2.55
PDS5AQ29RF7 AC148477.6-201ENST00000623746 465 ntBASIC31■■■□□ 2.55
PDS5AQ29RF7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PDS5AQ29RF7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.99■■■□□ 2.55
PDS5AQ29RF7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PDS5AQ29RF7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
PDS5AQ29RF7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
PDS5AQ29RF7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PDS5AQ29RF7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.98■■■□□ 2.55
PDS5AQ29RF7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
PDS5AQ29RF7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PDS5AQ29RF7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.98■■■□□ 2.55
PDS5AQ29RF7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.97■■■□□ 2.55
PDS5AQ29RF7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PDS5AQ29RF7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.97■■■□□ 2.55
PDS5AQ29RF7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
PDS5AQ29RF7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.96■■■□□ 2.55
PDS5AQ29RF7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PDS5AQ29RF7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
PDS5AQ29RF7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
PDS5AQ29RF7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
PDS5AQ29RF7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.94■■■□□ 2.54
PDS5AQ29RF7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
PDS5AQ29RF7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.93■■■□□ 2.54
PDS5AQ29RF7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms