Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC7.26□□□□□ -1.251e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.281e-6■■□□□ 14.2
EXOSC5Q9NQT4 IGF2BP2-209ENST00000493302 358 ntTSL 57□□□□□ -1.291e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-247ENST00000590810 362 ntTSL 56.85□□□□□ -1.311e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-255ENST00000626595 833 ntTSL 56.64□□□□□ -1.351e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-216ENST00000562680 5733 ntTSL 1 (best)6.6□□□□□ -1.351e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-251ENST00000625925 606 ntTSL 56.51□□□□□ -1.371e-6■■□□□ 14.2
EXOSC5Q9NQT4 ITFG1-205ENST00000563350 1006 ntTSL 36.46□□□□□ -1.381e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-221ENST00000563888 570 ntTSL 46.44□□□□□ -1.381e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-283ENST00000637115 7883 ntTSL 56.37□□□□□ -1.391e-6■■□□□ 14.2
EXOSC5Q9NQT4 AC138409.2-202ENST00000507274 458 ntBASIC6.28□□□□□ -1.41e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.18□□□□□ -1.421e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-252ENST00000626425 579 ntTSL 46.02□□□□□ -1.451e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-286ENST00000637250 7410 ntTSL 56□□□□□ -1.451e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-260ENST00000627685 882 ntTSL 55.99□□□□□ -1.451e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-285ENST00000637239 7771 ntTSL 55.97□□□□□ -1.451e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-213ENST00000562543 598 ntTSL 1 (best)5.83□□□□□ -1.481e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.51e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-242ENST00000569012 561 ntTSL 45.4□□□□□ -1.541e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.561e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-271ENST00000630319 737 ntTSL 55.24□□□□□ -1.571e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-212ENST00000562030 1084 ntTSL 55.23□□□□□ -1.571e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-220ENST00000563824 897 ntTSL 45.14□□□□□ -1.591e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-218ENST00000563686 6012 ntTSL 25.13□□□□□ -1.591e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-270ENST00000630268 635 ntTSL 45.07□□□□□ -1.61e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-214ENST00000562607 602 ntTSL 55.07□□□□□ -1.61e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-249ENST00000625716 359 ntTSL 1 (best)5.01□□□□□ -1.611e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-233ENST00000566376 462 ntTSL 54.98□□□□□ -1.611e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.96□□□□□ -1.621e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-229ENST00000565580 530 ntTSL 44.93□□□□□ -1.621e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-234ENST00000566514 969 ntTSL 34.93□□□□□ -1.621e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-235ENST00000566777 653 ntTSL 54.93□□□□□ -1.621e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-237ENST00000568147 550 ntTSL 44.87□□□□□ -1.631e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-272ENST00000630712 831 ntTSL 34.66□□□□□ -1.661e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-215ENST00000562638 401 ntTSL 1 (best)4.66□□□□□ -1.661e-6■■□□□ 14.2
EXOSC5Q9NQT4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.58□□□□□ -1.683e-8■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-280ENST00000636751 8283 ntTSL 54.42□□□□□ -1.71e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-275ENST00000631043 510 ntTSL 54.34□□□□□ -1.711e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-257ENST00000627136 624 ntTSL 54.34□□□□□ -1.711e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-223ENST00000564343 568 ntTSL 44.19□□□□□ -1.741e-6■■□□□ 14.2
EXOSC5Q9NQT4 ITFG1-212ENST00000569551 559 ntTSL 54.17□□□□□ -1.741e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-274ENST00000630828 735 ntTSL 23.99□□□□□ -1.771e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-217ENST00000562847 597 ntTSL 33.56□□□□□ -1.841e-6■■□□□ 14.2
EXOSC5Q9NQT4 TCF4-239ENST00000568186 583 ntTSL 23.28□□□□□ -1.881e-6■■□□□ 14.2
EXOSC5Q9NQT4 UBA2-206ENST00000591016 646 ntTSL 22.76□□□□□ -1.973e-8■■□□□ 14.2
EXOSC5Q9NQT4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.321e-6■■□□□ 14.2
EXOSC5Q9NQT4 EDEM1-206ENST00000465369 1956 ntTSL 520.55■□□□□ 0.881e-6■■□□□ 14.2
EXOSC5Q9NQT4 EDEM1-205ENST00000465187 585 ntTSL 416.85■□□□□ 0.291e-6■■□□□ 14.2
EXOSC5Q9NQT4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.021e-6■■□□□ 14.2
EXOSC5Q9NQT4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.85□□□□□ -0.031e-6■■□□□ 14.2
EXOSC5Q9NQT4 PAPD7-205ENST00000514697 1901 ntTSL 1 (best)14.54□□□□□ -0.081e-6■■□□□ 14.2
EXOSC5Q9NQT4 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC10.77□□□□□ -0.681e-6■■□□□ 14.2
EXOSC5Q9NQT4 EDEM1-202ENST00000434243 978 ntTSL 210.34□□□□□ -0.751e-6■■□□□ 14.2
EXOSC5Q9NQT4 SARNP-201ENST00000336133 926 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.951e-6■■□□□ 14.2
EXOSC5Q9NQT4 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.011e-6■■□□□ 14.2
EXOSC5Q9NQT4 SARNP-202ENST00000546604 1163 ntTSL 28.72□□□□□ -1.011e-6■■□□□ 14.2
EXOSC5Q9NQT4 PAPD7-203ENST00000511764 741 ntTSL 27.97□□□□□ -1.131e-6■■□□□ 14.2
EXOSC5Q9NQT4 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.251e-6■■□□□ 14.2
EXOSC5Q9NQT4 MAN1A2-205ENST00000482811 724 ntTSL 46.16□□□□□ -1.421e-6■■□□□ 14.2
EXOSC5Q9NQT4 PRR4-208ENST00000541175 384 ntTSL 26.06□□□□□ -1.441e-6■■□□□ 14.2
EXOSC5Q9NQT4 SARNP-205ENST00000552884 997 ntTSL 1 (best)6.05□□□□□ -1.441e-6■■□□□ 14.2
EXOSC5Q9NQT4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.79□□□□□ -1.961e-6■■□□□ 14.2
EXOSC5Q9NQT4 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC11.36□□□□□ -0.591e-6■■□□□ 14.1
EXOSC5Q9NQT4 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC10.96□□□□□ -0.661e-6■■□□□ 14.1
EXOSC5Q9NQT4 G2E3-210ENST00000552488 786 ntTSL 39.74□□□□□ -0.851e-6■■□□□ 14.1
EXOSC5Q9NQT4 G2E3-203ENST00000544007 1003 ntTSL 24.19□□□□□ -1.741e-6■■□□□ 14.1
EXOSC5Q9NQT4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.771e-6■■□□□ 14.1
EXOSC5Q9NQT4 G2E3-209ENST00000550944 565 ntTSL 22.04□□□□□ -2.081e-6■■□□□ 14.1
EXOSC5Q9NQT4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.711e-7■■□□□ 14
EXOSC5Q9NQT4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.611e-7■■□□□ 14
EXOSC5Q9NQT4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.081e-7■■□□□ 14
EXOSC5Q9NQT4 ASB1-208ENST00000481566 701 ntTSL 511.93□□□□□ -0.51e-7■■□□□ 14
EXOSC5Q9NQT4 STK3-205ENST00000518582 725 ntTSL 36.98□□□□□ -1.291e-6■■□□□ 14
EXOSC5Q9NQT4 NMU-204ENST00000509371 283 ntTSL 1 (best)2.77□□□□□ -1.974e-6■■□□□ 14
EXOSC5Q9NQT4 GARS-206ENST00000478124 1877 ntTSL 515.72■□□□□ 0.112e-7■■□□□ 14
EXOSC5Q9NQT4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.212e-7■■□□□ 14
EXOSC5Q9NQT4 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.612e-9■■□□□ 14
EXOSC5Q9NQT4 RBM12B-203ENST00000518597 579 ntTSL 29.2□□□□□ -0.942e-9■■□□□ 14
EXOSC5Q9NQT4 RBM12B-207ENST00000521947 452 ntTSL 38.93□□□□□ -0.982e-9■■□□□ 14
EXOSC5Q9NQT4 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.062e-9■■□□□ 14
EXOSC5Q9NQT4 RBM12B-205ENST00000520560 588 ntTSL 28.31□□□□□ -1.082e-9■■□□□ 14
EXOSC5Q9NQT4 RBM12B-204ENST00000519109 615 ntTSL 26.04□□□□□ -1.442e-9■■□□□ 14
EXOSC5Q9NQT4 RBM12B-206ENST00000520961 507 ntTSL 34.38□□□□□ -1.712e-9■■□□□ 14
EXOSC5Q9NQT4 ARF1-212ENST00000497165 675 ntTSL 312.57□□□□□ -0.42e-6■■□□□ 13.9
EXOSC5Q9NQT4 CCDC91-219ENST00000544780 693 ntTSL 316.08■□□□□ 0.169e-7■■□□□ 13.9
EXOSC5Q9NQT4 COA1-212ENST00000448704 1599 ntTSL 1 (best)15.4■□□□□ 0.062e-7■■□□□ 13.9
EXOSC5Q9NQT4 COA1-206ENST00000418140 1372 ntTSL 1 (best)10.49□□□□□ -0.732e-7■■□□□ 13.9
EXOSC5Q9NQT4 COA1-214ENST00000457939 406 ntTSL 38.62□□□□□ -1.032e-7■■□□□ 13.9
EXOSC5Q9NQT4 COA1-213ENST00000451651 585 ntTSL 38.61□□□□□ -1.032e-7■■□□□ 13.9
EXOSC5Q9NQT4 COA1-208ENST00000431651 720 ntAPPRIS ALT2 TSL 38.6□□□□□ -1.032e-7■■□□□ 13.9
EXOSC5Q9NQT4 COA1-217ENST00000478504 552 ntTSL 48.42□□□□□ -1.062e-7■■□□□ 13.9
EXOSC5Q9NQT4 COA1-216ENST00000470156 569 ntTSL 1 (best)4.81□□□□□ -1.642e-7■■□□□ 13.9
EXOSC5Q9NQT4 COA1-207ENST00000420441 547 ntTSL 24.55□□□□□ -1.682e-7■■□□□ 13.9
EXOSC5Q9NQT4 USP6NL-204ENST00000606752 1823 ntTSL 1 (best)18.45■□□□□ 0.542e-6■■□□□ 13.9
EXOSC5Q9NQT4 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.462e-6■■□□□ 13.9
EXOSC5Q9NQT4 USP6NL-206ENST00000609853 1748 ntTSL 4 BASIC10.47□□□□□ -0.732e-6■■□□□ 13.9
EXOSC5Q9NQT4 USP6NL-202ENST00000379237 4546 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.822e-6■■□□□ 13.9
EXOSC5Q9NQT4 USP6NL-203ENST00000443016 2491 ntTSL 27.11□□□□□ -1.272e-6■■□□□ 13.9
EXOSC5Q9NQT4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.38□□□□□ -0.437e-7■■□□□ 13.8
EXOSC5Q9NQT4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.08□□□□□ -0.477e-7■■□□□ 13.8
Retrieved 100 of 8,799 protein–RNA pairs in 348.1 ms