RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 NISCHQ9Y2I1 1504 aa26.03■■□□□ 1.76
USP6NL-206ENST00000609853 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
USP6NL-206ENST00000609853 AEBP2Q6ZN18 517 aaPredicted RBP21.98■■□□□ 1.11
USP6NL-206ENST00000609853 ZCCHC6Q5VYS8 1495 aaKnown RBP21.95■■□□□ 1.1
USP6NL-206ENST00000609853 DCAF1Q9Y4B6 1507 aa21.59■■□□□ 1.05
USP6NL-206ENST00000609853 SHROOM4Q9ULL8 1493 aa21.42■■□□□ 1.02
USP6NL-206ENST00000609853 DCAF8L2P0C7V8 631 aa21.29■■□□□ 1
USP6NL-206ENST00000609853 MYO15BQ96JP2 1530 aa21.18■□□□□ 0.98
USP6NL-206ENST00000609853 NACADO15069 1562 aa20.89■□□□□ 0.94
USP6NL-206ENST00000609853 SUPT5HO00267 1087 aaKnown RBP20.87■□□□□ 0.93
USP6NL-206ENST00000609853 ABCC9O60706 1549 aa20.83■□□□□ 0.92
USP6NL-206ENST00000609853 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
USP6NL-206ENST00000609853 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
USP6NL-206ENST00000609853 RB1CC1Q8TDY2 1594 aa20.6■□□□□ 0.89
USP6NL-206ENST00000609853 RSF1Q96T23 1441 aaPredicted RBP20.34■□□□□ 0.85
USP6NL-206ENST00000609853 UNC13AQ9UPW8 1703 aa20.17■□□□□ 0.82
USP6NL-206ENST00000609853 CECR2Q9BXF3 1484 aa20.13■□□□□ 0.81
USP6NL-206ENST00000609853 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
USP6NL-206ENST00000609853 BAZ1AQ9NRL2 1556 aaPredicted RBP20.09■□□□□ 0.81
USP6NL-206ENST00000609853 WIZO95785 1651 aa19.95■□□□□ 0.78
USP6NL-206ENST00000609853 BICRAQ9NZM4 1560 aa19.92■□□□□ 0.78
USP6NL-206ENST00000609853 SMARCA4P51532 1647 aa19.91■□□□□ 0.78
USP6NL-206ENST00000609853 TOP2AP11388 1531 aaKnown RBP19.79■□□□□ 0.76
USP6NL-206ENST00000609853 PABPN1Q86U42 306 aaKnown RBP eCLIP19.71■□□□□ 0.75
USP6NL-206ENST00000609853 PEG3Q9GZU2 1588 aa19.69■□□□□ 0.74
USP6NL-206ENST00000609853 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
USP6NL-206ENST00000609853 EIF4G1Q04637 1599 aaKnown RBP19.6■□□□□ 0.73
USP6NL-206ENST00000609853 SMARCA2P51531 1590 aa19.6■□□□□ 0.73
USP6NL-206ENST00000609853 CCDC88BA6NC98 1476 aa19.57■□□□□ 0.72
USP6NL-206ENST00000609853 ATAD2BQ9ULI0 1458 aa19.47■□□□□ 0.71
USP6NL-206ENST00000609853 LOC105371045A0A1W2PR82 267 aa19.43■□□□□ 0.7
USP6NL-206ENST00000609853 BAZ1BQ9UIG0 1483 aaKnown RBP19.4■□□□□ 0.7
USP6NL-206ENST00000609853 HMGXB3Q12766 1538 aa19.28■□□□□ 0.68
USP6NL-206ENST00000609853 NCAPD3P42695 1498 aa19.26■□□□□ 0.67
USP6NL-206ENST00000609853 ABCC8Q09428 1581 aa19.26■□□□□ 0.67
USP6NL-206ENST00000609853 FAM9AQ8IZU1 332 aaPredicted RBP19.22■□□□□ 0.67
USP6NL-206ENST00000609853 EEA1Q15075 1411 aa19.17■□□□□ 0.66
USP6NL-206ENST00000609853 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
USP6NL-206ENST00000609853 DNAJC5BQ9UF47 199 aa19.09■□□□□ 0.65
USP6NL-206ENST00000609853 PCGF6Q9BYE7 350 aa19.03■□□□□ 0.64
USP6NL-206ENST00000609853 SYNJ1O43426 1573 aa19.02■□□□□ 0.63
USP6NL-206ENST00000609853 SOGA1O94964 1423 aa19■□□□□ 0.63
USP6NL-206ENST00000609853 TRIM26Q12899 539 aaPredicted RBP18.99■□□□□ 0.63
USP6NL-206ENST00000609853 CSRNP3Q8WYN3 585 aa18.96■□□□□ 0.63
USP6NL-206ENST00000609853 TOP2BQ02880 1626 aa18.96■□□□□ 0.63
USP6NL-206ENST00000609853 CFTRP13569 1480 aa18.95■□□□□ 0.62
USP6NL-206ENST00000609853 BIVM-ERCC5R4GMW8 1640 aa18.93■□□□□ 0.62
USP6NL-206ENST00000609853 PRDM2Q13029 1718 aa18.92■□□□□ 0.62
USP6NL-206ENST00000609853 TNIKQ9UKE5 1360 aa18.9■□□□□ 0.62
USP6NL-206ENST00000609853 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.62
USP6NL-206ENST00000609853 GOLGA3Q08378 1498 aa18.87■□□□□ 0.61
USP6NL-206ENST00000609853 RUSC2Q8N2Y8 1516 aa18.87■□□□□ 0.61
USP6NL-206ENST00000609853 HRCP23327 699 aa18.87■□□□□ 0.61
USP6NL-206ENST00000609853 EHMT2Q96KQ7 1210 aa18.87■□□□□ 0.61
USP6NL-206ENST00000609853 KIF21BO75037 1637 aa18.85■□□□□ 0.61
USP6NL-206ENST00000609853 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
USP6NL-206ENST00000609853 CEP162Q5TB80 1403 aa18.79■□□□□ 0.6
USP6NL-206ENST00000609853 CADPSQ9ULU8 1353 aa18.79■□□□□ 0.6
USP6NL-206ENST00000609853 CUX1P39880 1505 aa18.76■□□□□ 0.59
USP6NL-206ENST00000609853 UBTFP17480 764 aaKnown RBP18.74■□□□□ 0.59
USP6NL-206ENST00000609853 SENP3Q9H4L4 574 aaPredicted RBP18.72■□□□□ 0.59
USP6NL-206ENST00000609853 ERICH3Q5RHP9 1530 aa18.66■□□□□ 0.58
USP6NL-206ENST00000609853 KIF27Q86VH2 1401 aa18.65■□□□□ 0.58
USP6NL-206ENST00000609853 PRXQ9BXM0 1461 aa18.61■□□□□ 0.57
USP6NL-206ENST00000609853 RAPGEF2Q9Y4G8 1499 aa18.61■□□□□ 0.57
USP6NL-206ENST00000609853 CLIP1P30622 1438 aa18.57■□□□□ 0.56
USP6NL-206ENST00000609853 FANCD2Q9BXW9 1451 aa18.57■□□□□ 0.56
USP6NL-206ENST00000609853 LAMC3Q9Y6N6 1575 aa18.55■□□□□ 0.56
USP6NL-206ENST00000609853 ZEB1P37275 1124 aaPredicted RBP18.52■□□□□ 0.56
USP6NL-206ENST00000609853 DNMBPQ6XZF7 1577 aa18.5■□□□□ 0.55
USP6NL-206ENST00000609853 FGD5Q6ZNL6 1462 aa18.5■□□□□ 0.55
USP6NL-206ENST00000609853 VPS8Q8N3P4 1428 aa18.48■□□□□ 0.55
USP6NL-206ENST00000609853 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
USP6NL-206ENST00000609853 CUX2O14529 1486 aa18.46■□□□□ 0.55
USP6NL-206ENST00000609853 PPARGC1BQ86YN6 1023 aaKnown RBP18.43■□□□□ 0.54
USP6NL-206ENST00000609853 TOPBP1Q92547 1522 aa18.42■□□□□ 0.54
USP6NL-206ENST00000609853 IGF1RP08069 1367 aa18.41■□□□□ 0.54
USP6NL-206ENST00000609853 NESP48681 1621 aa18.41■□□□□ 0.54
USP6NL-206ENST00000609853 PDS5BQ9NTI5 1447 aa18.39■□□□□ 0.53
USP6NL-206ENST00000609853 ABCA10Q8WWZ4 1543 aa18.38■□□□□ 0.53
USP6NL-206ENST00000609853 POLA1P09884 1462 aaPredicted RBP18.35■□□□□ 0.53
USP6NL-206ENST00000609853 APLP2Q06481 763 aa18.34■□□□□ 0.53
USP6NL-206ENST00000609853 CARMIL1Q5VZK9 1371 aa18.33■□□□□ 0.53
USP6NL-206ENST00000609853 ARAP1Q96P48 1450 aa18.3■□□□□ 0.52
USP6NL-206ENST00000609853 URB2Q14146 1524 aaKnown RBP18.29■□□□□ 0.52
USP6NL-206ENST00000609853 CUL7Q14999 1698 aa18.28■□□□□ 0.52
USP6NL-206ENST00000609853 WDR97A6NE52 1622 aa18.27■□□□□ 0.51
USP6NL-206ENST00000609853 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
USP6NL-206ENST00000609853 KIF21AQ7Z4S6 1674 aa18.23■□□□□ 0.51
USP6NL-206ENST00000609853 ARHGAP35Q9NRY4 1499 aa18.23■□□□□ 0.51
USP6NL-206ENST00000609853 RANGAP1P46060 587 aaPredicted RBP18.21■□□□□ 0.51
USP6NL-206ENST00000609853 TTBK1Q5TCY1 1321 aaPredicted RBP18.19■□□□□ 0.5
USP6NL-206ENST00000609853 ABCA5Q8WWZ7 1642 aa18.18■□□□□ 0.5
USP6NL-206ENST00000609853 CCER1Q8TC90 406 aaPredicted RBP18.14■□□□□ 0.49
USP6NL-206ENST00000609853 MAP3K1Q13233 1512 aa18.14■□□□□ 0.49
USP6NL-206ENST00000609853 CTTNBP2Q8WZ74 1663 aa18.12■□□□□ 0.49
USP6NL-206ENST00000609853 GAPVD1Q14C86 1478 aa18.12■□□□□ 0.49
USP6NL-206ENST00000609853 EFCAB5A4FU69 1503 aa18.11■□□□□ 0.49
USP6NL-206ENST00000609853 TARBP1Q13395 1621 aaKnown RBP18.11■□□□□ 0.49
USP6NL-206ENST00000609853 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms