RNA–Protein interactions for RNA: ENST00000630712.2

TCF4-272, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-272ENST00000630712 AEBP2Q6ZN18 517 aaPredicted RBP21.61■■□□□ 1.05
TCF4-272ENST00000630712 CHIC1Q5VXU3 224 aa20.11■□□□□ 0.81
TCF4-272ENST00000630712 SENP3Q9H4L4 574 aaPredicted RBP18.35■□□□□ 0.53
TCF4-272ENST00000630712 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
TCF4-272ENST00000630712 FOXD1Q16676 465 aa17.23■□□□□ 0.35
TCF4-272ENST00000630712 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
TCF4-272ENST00000630712 MSH5O43196 834 aa16.14■□□□□ 0.17
TCF4-272ENST00000630712 PIAS4Q8N2W9 510 aaPredicted RBP16.01■□□□□ 0.15
TCF4-272ENST00000630712 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
TCF4-272ENST00000630712 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
TCF4-272ENST00000630712 ADRA2BP18089 450 aa15.84■□□□□ 0.13
TCF4-272ENST00000630712 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
TCF4-272ENST00000630712 DMRT2Q9Y5R5 561 aa14.53□□□□□ -0.08
TCF4-272ENST00000630712 SCAF1Q9H7N4 1312 aaKnown RBP14.33□□□□□ -0.12
TCF4-272ENST00000630712 CACNB1Q02641 598 aaPredicted RBP14.12□□□□□ -0.15
TCF4-272ENST00000630712 DCAF8L1A6NGE4 600 aa14.03□□□□□ -0.16
TCF4-272ENST00000630712 PPP4R3CPQ6ZMV5 832 aa14.03□□□□□ -0.16
TCF4-272ENST00000630712 HOXD11P31277 338 aaPredicted RBP13.85□□□□□ -0.19
TCF4-272ENST00000630712 RNF39Q9H2S5 420 aa13.8□□□□□ -0.2
TCF4-272ENST00000630712 CNKSR2Q8WXI2 1034 aa13.76□□□□□ -0.21
TCF4-272ENST00000630712 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
TCF4-272ENST00000630712 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
TCF4-272ENST00000630712 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
TCF4-272ENST00000630712 DNAJC5BQ9UF47 199 aa13.32□□□□□ -0.28
TCF4-272ENST00000630712 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
TCF4-272ENST00000630712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.23□□□□□ -0.29
TCF4-272ENST00000630712 KCNA4P22459 653 aa12.96□□□□□ -0.33
TCF4-272ENST00000630712 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
TCF4-272ENST00000630712 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
TCF4-272ENST00000630712 CAPN15O75808 1086 aa12.84□□□□□ -0.35
TCF4-272ENST00000630712 DSG3P32926 999 aa12.83□□□□□ -0.36
TCF4-272ENST00000630712 POTEHQ6S545 545 aa12.78□□□□□ -0.36
TCF4-272ENST00000630712 SLC4A2P04920 1241 aa12.7□□□□□ -0.38
TCF4-272ENST00000630712 TRHP20396 242 aaPredicted RBP12.58□□□□□ -0.4
TCF4-272ENST00000630712 ABCB7O75027 752 aa12.57□□□□□ -0.4
TCF4-272ENST00000630712 ZNF219Q9P2Y4 722 aaPredicted RBP12.44□□□□□ -0.42
TCF4-272ENST00000630712 APLP2Q06481 763 aa12.43□□□□□ -0.42
TCF4-272ENST00000630712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
TCF4-272ENST00000630712 HNRNPUL2Q1KMD3 747 aaKnown RBP12.41□□□□□ -0.42
TCF4-272ENST00000630712 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
TCF4-272ENST00000630712 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
TCF4-272ENST00000630712 SLC4A1APQ9BWU0 796 aaKnown RBP12.2□□□□□ -0.46
TCF4-272ENST00000630712 RBM42Q9BTD8 480 aaKnown RBP12.16□□□□□ -0.46
TCF4-272ENST00000630712 POLA2Q14181 598 aa12.15□□□□□ -0.46
TCF4-272ENST00000630712 CHRDL2Q6WN34 429 aa12.1□□□□□ -0.47
TCF4-272ENST00000630712 FOXD4L1Q9NU39 408 aa12.08□□□□□ -0.48
TCF4-272ENST00000630712 ATF5Q9Y2D1 282 aaPredicted RBP12.04□□□□□ -0.48
TCF4-272ENST00000630712 ZBTB22O15209 634 aa11.9□□□□□ -0.5
TCF4-272ENST00000630712 AKT1S1Q96B36 256 aa11.84□□□□□ -0.51
TCF4-272ENST00000630712 SP7Q8TDD2 431 aaPredicted RBP11.81□□□□□ -0.52
TCF4-272ENST00000630712 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
TCF4-272ENST00000630712 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
TCF4-272ENST00000630712 ZBTB12Q9Y330 459 aaPredicted RBP11.79□□□□□ -0.52
TCF4-272ENST00000630712 PIP4P2Q8N4L2 257 aa11.77□□□□□ -0.53
TCF4-272ENST00000630712 PITPNM1O00562 1244 aa11.69□□□□□ -0.54
TCF4-272ENST00000630712 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
TCF4-272ENST00000630712 HAX1O00165 279 aa11.64□□□□□ -0.55
TCF4-272ENST00000630712 FXR2P51116 673 aaKnown RBP eCLIP11.61□□□□□ -0.55
TCF4-272ENST00000630712 EVX2Q03828 476 aa11.55□□□□□ -0.56
TCF4-272ENST00000630712 FBLN2P98095 1184 aa11.52□□□□□ -0.57
TCF4-272ENST00000630712 SPDYE2BA6NHP3 402 aa11.45□□□□□ -0.58
TCF4-272ENST00000630712 SPDYE6P0CI01 402 aa11.45□□□□□ -0.58
TCF4-272ENST00000630712 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
TCF4-272ENST00000630712 SPDYE2Q495Y8 402 aa11.45□□□□□ -0.58
TCF4-272ENST00000630712 CLEC11AQ9Y240 323 aa11.38□□□□□ -0.59
TCF4-272ENST00000630712 PRKAR2AP13861 404 aaKnown RBP11.37□□□□□ -0.59
TCF4-272ENST00000630712 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
TCF4-272ENST00000630712 SPDYE1Q8NFV5 336 aaPredicted RBP11.3□□□□□ -0.6
TCF4-272ENST00000630712 CSRNP3Q8WYN3 585 aa11.28□□□□□ -0.6
TCF4-272ENST00000630712 SSUH2Q9Y2M2 353 aa11.28□□□□□ -0.6
TCF4-272ENST00000630712 C19orf67A6NJJ6 358 aa11.25□□□□□ -0.61
TCF4-272ENST00000630712 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
TCF4-272ENST00000630712 GABBR2O75899 941 aa11.2□□□□□ -0.62
TCF4-272ENST00000630712 PABPN1Q86U42 306 aaKnown RBP eCLIP11.19□□□□□ -0.62
TCF4-272ENST00000630712 EHMT2Q96KQ7 1210 aa11.14□□□□□ -0.63
TCF4-272ENST00000630712 PRR29P0C7W0 189 aa11.12□□□□□ -0.63
TCF4-272ENST00000630712 LHX8Q68G74 356 aa11.09□□□□□ -0.63
TCF4-272ENST00000630712 POTEIP0CG38 1075 aa11□□□□□ -0.65
TCF4-272ENST00000630712 CD44P16070 742 aaKnown RBP10.99□□□□□ -0.65
TCF4-272ENST00000630712 FARP1Q9Y4F1 1045 aaPredicted RBP10.96□□□□□ -0.65
TCF4-272ENST00000630712 SPDYE4A6NLX3 237 aa10.86□□□□□ -0.67
TCF4-272ENST00000630712 CREBZFQ9NS37 354 aa10.81□□□□□ -0.68
TCF4-272ENST00000630712 STAG3Q9UJ98 1225 aa10.8□□□□□ -0.68
TCF4-272ENST00000630712 DCBLD2Q96PD2 775 aa10.79□□□□□ -0.68
TCF4-272ENST00000630712 ZRANB1Q9UGI0 708 aa10.79□□□□□ -0.68
TCF4-272ENST00000630712 ZNF579Q8NAF0 562 aaKnown RBP10.76□□□□□ -0.69
TCF4-272ENST00000630712 CLCN6P51797 869 aa10.74□□□□□ -0.69
TCF4-272ENST00000630712 GALR2O43603 387 aaPredicted RBP10.73□□□□□ -0.69
TCF4-272ENST00000630712 PLSCR2Q9NRY7 297 aa10.71□□□□□ -0.69
TCF4-272ENST00000630712 PHF12Q96QT6 1004 aa10.66□□□□□ -0.7
TCF4-272ENST00000630712 POTEB2H3BUK9 544 aa10.65□□□□□ -0.7
TCF4-272ENST00000630712 OTUD5Q96G74 571 aa10.63□□□□□ -0.71
TCF4-272ENST00000630712 PAK3O75914 559 aaPredicted RBP10.59□□□□□ -0.71
TCF4-272ENST00000630712 MNX1P50219 401 aaPredicted RBP10.59□□□□□ -0.71
TCF4-272ENST00000630712 NPM1P06748 294 aaKnown RBP eCLIP10.58□□□□□ -0.72
TCF4-272ENST00000630712 PELP1Q8IZL8 1130 aaKnown RBP10.58□□□□□ -0.72
TCF4-272ENST00000630712 PROM2Q8N271 834 aa10.51□□□□□ -0.73
TCF4-272ENST00000630712 MS4A3Q96HJ5 214 aa10.48□□□□□ -0.73
TCF4-272ENST00000630712 POTEMA6NI47 508 aa10.47□□□□□ -0.73
TCF4-272ENST00000630712 TSPYL2Q9H2G4 693 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms