RNA–Protein interactions for RNA: ENST00000470156.1

COA1-216, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 1 (best)

Gene COA1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-216ENST00000470156 AEBP2Q6ZN18 517 aaPredicted RBP15.24■□□□□ 0.03
COA1-216ENST00000470156 NISCHQ9Y2I1 1504 aa14.92□□□□□ -0.02
COA1-216ENST00000470156 CHIC1Q5VXU3 224 aa14.26□□□□□ -0.13
COA1-216ENST00000470156 CCDC180Q9P1Z9 1646 aa13.35□□□□□ -0.27
COA1-216ENST00000470156 SENP3Q9H4L4 574 aaPredicted RBP13.1□□□□□ -0.31
COA1-216ENST00000470156 ABCC9O60706 1549 aa13.04□□□□□ -0.32
COA1-216ENST00000470156 PHF23Q9BUL5 403 aaPredicted RBP12.82□□□□□ -0.36
COA1-216ENST00000470156 RB1CC1Q8TDY2 1594 aa12.6□□□□□ -0.39
COA1-216ENST00000470156 NACADO15069 1562 aa12.58□□□□□ -0.4
COA1-216ENST00000470156 MYO15BQ96JP2 1530 aa12.51□□□□□ -0.41
COA1-216ENST00000470156 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
COA1-216ENST00000470156 ZCCHC6Q5VYS8 1495 aaKnown RBP12.4□□□□□ -0.42
COA1-216ENST00000470156 DCAF1Q9Y4B6 1507 aa12.4□□□□□ -0.42
COA1-216ENST00000470156 UNC13AQ9UPW8 1703 aa12.27□□□□□ -0.45
COA1-216ENST00000470156 FOXD1Q16676 465 aa12.22□□□□□ -0.45
COA1-216ENST00000470156 BICRAQ9NZM4 1560 aa12.17□□□□□ -0.46
COA1-216ENST00000470156 SHROOM4Q9ULL8 1493 aa12.14□□□□□ -0.47
COA1-216ENST00000470156 PABPN1Q86U42 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
COA1-216ENST00000470156 SCRIBQ14160 1630 aa12.08□□□□□ -0.48
COA1-216ENST00000470156 DNAJC5BQ9UF47 199 aa12.02□□□□□ -0.49
COA1-216ENST00000470156 POTEDQ86YR6 584 aa11.97□□□□□ -0.49
COA1-216ENST00000470156 EIF4G1Q04637 1599 aaKnown RBP11.87□□□□□ -0.51
COA1-216ENST00000470156 CC2D2AQ9P2K1 1620 aa11.84□□□□□ -0.51
COA1-216ENST00000470156 CECR2Q9BXF3 1484 aa11.76□□□□□ -0.53
COA1-216ENST00000470156 MSH5O43196 834 aa11.63□□□□□ -0.55
COA1-216ENST00000470156 SMARCA4P51532 1647 aa11.59□□□□□ -0.55
COA1-216ENST00000470156 BAZ1AQ9NRL2 1556 aaPredicted RBP11.58□□□□□ -0.55
COA1-216ENST00000470156 NCAPD3P42695 1498 aa11.58□□□□□ -0.56
COA1-216ENST00000470156 SMARCA2P51531 1590 aa11.57□□□□□ -0.56
COA1-216ENST00000470156 ATAD2BQ9ULI0 1458 aa11.55□□□□□ -0.56
COA1-216ENST00000470156 HMGXB3Q12766 1538 aa11.53□□□□□ -0.56
COA1-216ENST00000470156 PEG3Q9GZU2 1588 aa11.52□□□□□ -0.57
COA1-216ENST00000470156 MROH2BQ7Z745 1585 aa11.45□□□□□ -0.58
COA1-216ENST00000470156 BAZ1BQ9UIG0 1483 aaKnown RBP11.44□□□□□ -0.58
COA1-216ENST00000470156 PIAS4Q8N2W9 510 aaPredicted RBP11.33□□□□□ -0.6
COA1-216ENST00000470156 WIZO95785 1651 aa11.33□□□□□ -0.6
COA1-216ENST00000470156 LAMC3Q9Y6N6 1575 aa11.31□□□□□ -0.6
COA1-216ENST00000470156 RSF1Q96T23 1441 aaPredicted RBP11.29□□□□□ -0.6
COA1-216ENST00000470156 ERCC6Q03468 1493 aa11.29□□□□□ -0.6
COA1-216ENST00000470156 CUX2O14529 1486 aa11.25□□□□□ -0.61
COA1-216ENST00000470156 NESP48681 1621 aa11.24□□□□□ -0.61
COA1-216ENST00000470156 TOP2AP11388 1531 aaKnown RBP11.24□□□□□ -0.61
COA1-216ENST00000470156 CADPSQ9ULU8 1353 aa11.23□□□□□ -0.61
COA1-216ENST00000470156 PDS5BQ9NTI5 1447 aa11.23□□□□□ -0.61
COA1-216ENST00000470156 THOC2Q8NI27 1593 aaKnown RBP11.16□□□□□ -0.62
COA1-216ENST00000470156 KIF21AQ7Z4S6 1674 aa11.15□□□□□ -0.62
COA1-216ENST00000470156 CFTRP13569 1480 aa11.14□□□□□ -0.63
COA1-216ENST00000470156 PLPPR3Q6T4P5 718 aa11.11□□□□□ -0.63
COA1-216ENST00000470156 PPP6R1Q9UPN7 881 aa11.1□□□□□ -0.63
COA1-216ENST00000470156 MRC2Q9UBG0 1479 aa11.09□□□□□ -0.63
COA1-216ENST00000470156 CEP164Q9UPV0 1460 aa11.09□□□□□ -0.63
COA1-216ENST00000470156 PRDM2Q13029 1718 aa11.09□□□□□ -0.63
COA1-216ENST00000470156 CCDC88BA6NC98 1476 aa11.08□□□□□ -0.64
COA1-216ENST00000470156 FANCD2Q9BXW9 1451 aa11.07□□□□□ -0.64
COA1-216ENST00000470156 WDR62O43379 1518 aa11.07□□□□□ -0.64
COA1-216ENST00000470156 ADRA2BP18089 450 aa11.03□□□□□ -0.64
COA1-216ENST00000470156 DNAJC5Q9H3Z4 198 aa10.98□□□□□ -0.65
COA1-216ENST00000470156 ABCC8Q09428 1581 aa10.96□□□□□ -0.65
COA1-216ENST00000470156 URB2Q14146 1524 aaKnown RBP10.95□□□□□ -0.66
COA1-216ENST00000470156 DNMBPQ6XZF7 1577 aa10.89□□□□□ -0.67
COA1-216ENST00000470156 TOPBP1Q92547 1522 aa10.89□□□□□ -0.67
COA1-216ENST00000470156 SUPT5HO00267 1087 aaKnown RBP10.88□□□□□ -0.67
COA1-216ENST00000470156 IFT140Q96RY7 1462 aa10.87□□□□□ -0.67
COA1-216ENST00000470156 POLA1P09884 1462 aaPredicted RBP10.79□□□□□ -0.68
COA1-216ENST00000470156 WDR97A6NE52 1622 aa10.78□□□□□ -0.68
COA1-216ENST00000470156 TARBP1Q13395 1621 aaKnown RBP10.78□□□□□ -0.68
COA1-216ENST00000470156 ZNF608Q9ULD9 1512 aaPredicted RBP10.76□□□□□ -0.69
COA1-216ENST00000470156 SOGA1O94964 1423 aa10.75□□□□□ -0.69
COA1-216ENST00000470156 CUX1P39880 1505 aa10.75□□□□□ -0.69
COA1-216ENST00000470156 EIF4G3O43432 1585 aaKnown RBP10.75□□□□□ -0.69
COA1-216ENST00000470156 OSCARQ8IYS5 282 aa10.75□□□□□ -0.69
COA1-216ENST00000470156 FGD5Q6ZNL6 1462 aa10.74□□□□□ -0.69
COA1-216ENST00000470156 RAD54L2Q9Y4B4 1467 aa10.7□□□□□ -0.7
COA1-216ENST00000470156 AQRO60306 1485 aaKnown RBP eCLIP10.69□□□□□ -0.7
COA1-216ENST00000470156 BIVM-ERCC5R4GMW8 1640 aa10.68□□□□□ -0.7
COA1-216ENST00000470156 WRNQ14191 1432 aaPredicted RBP eCLIP10.67□□□□□ -0.7
COA1-216ENST00000470156 TOP2BQ02880 1626 aa10.67□□□□□ -0.7
COA1-216ENST00000470156 ABCA10Q8WWZ4 1543 aa10.67□□□□□ -0.7
COA1-216ENST00000470156 TDRD9Q8NDG6 1382 aaKnown RBP10.65□□□□□ -0.7
COA1-216ENST00000470156 GRIN2BQ13224 1484 aa10.65□□□□□ -0.7
COA1-216ENST00000470156 MAGI1Q96QZ7 1491 aaPredicted RBP10.65□□□□□ -0.7
COA1-216ENST00000470156 CHD1O14646 1710 aa10.64□□□□□ -0.71
COA1-216ENST00000470156 GAPVD1Q14C86 1478 aa10.63□□□□□ -0.71
COA1-216ENST00000470156 ABCA5Q8WWZ7 1642 aa10.62□□□□□ -0.71
COA1-216ENST00000470156 PBRM1Q86U86 1689 aa10.62□□□□□ -0.71
COA1-216ENST00000470156 SNAPC4Q5SXM2 1469 aa10.61□□□□□ -0.71
COA1-216ENST00000470156 SYNJ1O43426 1573 aa10.61□□□□□ -0.71
COA1-216ENST00000470156 SYNJ2O15056 1496 aa10.59□□□□□ -0.71
COA1-216ENST00000470156 FBLN2P98095 1184 aa10.58□□□□□ -0.72
COA1-216ENST00000470156 CHMP7Q8WUX9 453 aaPredicted RBP10.58□□□□□ -0.72
COA1-216ENST00000470156 RIMBP3CA6NJZ7 1639 aa10.55□□□□□ -0.72
COA1-216ENST00000470156 RIMBP3BA6NNM3 1639 aa10.55□□□□□ -0.72
COA1-216ENST00000470156 RIMBP3Q9UFD9 1639 aa10.55□□□□□ -0.72
COA1-216ENST00000470156 ERICH3Q5RHP9 1530 aa10.55□□□□□ -0.72
COA1-216ENST00000470156 ARHGEF11O15085 1522 aa10.54□□□□□ -0.72
COA1-216ENST00000470156 CLASP1Q7Z460 1538 aa10.53□□□□□ -0.72
COA1-216ENST00000470156 ADAMTS12P58397 1594 aa10.52□□□□□ -0.73
COA1-216ENST00000470156 FHAD1B1AJZ9 1412 aa10.51□□□□□ -0.73
COA1-216ENST00000470156 TRIM41Q8WV44 630 aa10.51□□□□□ -0.73
COA1-216ENST00000470156 GRIN2AQ12879 1464 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms