RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-233ENST00000566376 AEBP2Q6ZN18 517 aaPredicted RBP24.79■■□□□ 1.56
TCF4-233ENST00000566376 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
TCF4-233ENST00000566376 SENP3Q9H4L4 574 aaPredicted RBP21.3■■□□□ 1
TCF4-233ENST00000566376 PHF23Q9BUL5 403 aaPredicted RBP20.94■□□□□ 0.94
TCF4-233ENST00000566376 POTEDQ86YR6 584 aa20.08■□□□□ 0.81
TCF4-233ENST00000566376 FOXD1Q16676 465 aa19.97■□□□□ 0.79
TCF4-233ENST00000566376 MSH5O43196 834 aa19.02■□□□□ 0.64
TCF4-233ENST00000566376 PIAS4Q8N2W9 510 aaPredicted RBP18.51■□□□□ 0.55
TCF4-233ENST00000566376 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
TCF4-233ENST00000566376 ADRA2BP18089 450 aa17.95■□□□□ 0.46
TCF4-233ENST00000566376 PLPPR3Q6T4P5 718 aa17.75■□□□□ 0.43
TCF4-233ENST00000566376 CACNB1Q02641 598 aaPredicted RBP16.98■□□□□ 0.31
TCF4-233ENST00000566376 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
TCF4-233ENST00000566376 DMRT2Q9Y5R5 561 aa16.72■□□□□ 0.27
TCF4-233ENST00000566376 NISCHQ9Y2I1 1504 aa16.51■□□□□ 0.23
TCF4-233ENST00000566376 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
TCF4-233ENST00000566376 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
TCF4-233ENST00000566376 RNF39Q9H2S5 420 aa16.11■□□□□ 0.17
TCF4-233ENST00000566376 C1QBPQ07021 282 aaKnown RBP15.84■□□□□ 0.13
TCF4-233ENST00000566376 HOXD11P31277 338 aaPredicted RBP15.72■□□□□ 0.11
TCF4-233ENST00000566376 POTEHQ6S545 545 aa15.58■□□□□ 0.08
TCF4-233ENST00000566376 PPP4R3CPQ6ZMV5 832 aa15.48■□□□□ 0.07
TCF4-233ENST00000566376 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
TCF4-233ENST00000566376 CNKSR2Q8WXI2 1034 aa15.36■□□□□ 0.05
TCF4-233ENST00000566376 DNAJC5BQ9UF47 199 aa15.25■□□□□ 0.03
TCF4-233ENST00000566376 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.17■□□□□ 0.02
TCF4-233ENST00000566376 CCDC180Q9P1Z9 1646 aa14.89□□□□□ -0.03
TCF4-233ENST00000566376 CAPN15O75808 1086 aa14.84□□□□□ -0.03
TCF4-233ENST00000566376 DSG3P32926 999 aa14.82□□□□□ -0.04
TCF4-233ENST00000566376 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
TCF4-233ENST00000566376 NCBP3Q53F19 620 aaKnown RBP14.64□□□□□ -0.07
TCF4-233ENST00000566376 U3KPZ7 1027 aaPredicted RBP14.64□□□□□ -0.07
TCF4-233ENST00000566376 ABCC9O60706 1549 aa14.52□□□□□ -0.08
TCF4-233ENST00000566376 ABCB7O75027 752 aa14.42□□□□□ -0.1
TCF4-233ENST00000566376 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
TCF4-233ENST00000566376 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
TCF4-233ENST00000566376 CHRDL2Q6WN34 429 aa14.25□□□□□ -0.13
TCF4-233ENST00000566376 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
TCF4-233ENST00000566376 SP7Q8TDD2 431 aaPredicted RBP14.19□□□□□ -0.14
TCF4-233ENST00000566376 RBM42Q9BTD8 480 aaKnown RBP14.19□□□□□ -0.14
TCF4-233ENST00000566376 APLP2Q06481 763 aa14.17□□□□□ -0.14
TCF4-233ENST00000566376 UNC13AQ9UPW8 1703 aa13.99□□□□□ -0.17
TCF4-233ENST00000566376 RB1CC1Q8TDY2 1594 aa13.93□□□□□ -0.18
TCF4-233ENST00000566376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
TCF4-233ENST00000566376 SLC4A2P04920 1241 aa13.93□□□□□ -0.18
TCF4-233ENST00000566376 HNRNPUL2Q1KMD3 747 aaKnown RBP13.93□□□□□ -0.18
TCF4-233ENST00000566376 NACADO15069 1562 aa13.88□□□□□ -0.19
TCF4-233ENST00000566376 KCNA4P22459 653 aa13.83□□□□□ -0.2
TCF4-233ENST00000566376 HAX1O00165 279 aa13.81□□□□□ -0.2
TCF4-233ENST00000566376 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
TCF4-233ENST00000566376 ZCCHC6Q5VYS8 1495 aaKnown RBP13.78□□□□□ -0.2
TCF4-233ENST00000566376 MYO15BQ96JP2 1530 aa13.76□□□□□ -0.21
TCF4-233ENST00000566376 POLA2Q14181 598 aa13.75□□□□□ -0.21
TCF4-233ENST00000566376 PIP4P2Q8N4L2 257 aa13.72□□□□□ -0.21
TCF4-233ENST00000566376 BICRAQ9NZM4 1560 aa13.71□□□□□ -0.22
TCF4-233ENST00000566376 DCAF1Q9Y4B6 1507 aa13.67□□□□□ -0.22
TCF4-233ENST00000566376 AKT1S1Q96B36 256 aa13.66□□□□□ -0.22
TCF4-233ENST00000566376 REM2Q8IYK8 340 aaPredicted RBP13.57□□□□□ -0.24
TCF4-233ENST00000566376 SCRIBQ14160 1630 aa13.5□□□□□ -0.25
TCF4-233ENST00000566376 EVX2Q03828 476 aa13.47□□□□□ -0.25
TCF4-233ENST00000566376 DCAF8L2P0C7V8 631 aa13.46□□□□□ -0.25
TCF4-233ENST00000566376 PITPNM1O00562 1244 aa13.44□□□□□ -0.26
TCF4-233ENST00000566376 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.26
TCF4-233ENST00000566376 PABPN1Q86U42 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
TCF4-233ENST00000566376 PLSCR2Q9NRY7 297 aa13.37□□□□□ -0.27
TCF4-233ENST00000566376 SHROOM4Q9ULL8 1493 aa13.35□□□□□ -0.27
TCF4-233ENST00000566376 OSCARQ8IYS5 282 aa13.34□□□□□ -0.27
TCF4-233ENST00000566376 ZBTB12Q9Y330 459 aaPredicted RBP13.34□□□□□ -0.27
TCF4-233ENST00000566376 LHX8Q68G74 356 aa13.33□□□□□ -0.28
TCF4-233ENST00000566376 SLC4A1APQ9BWU0 796 aaKnown RBP13.33□□□□□ -0.28
TCF4-233ENST00000566376 MYCNP04198 464 aaPredicted RBP13.32□□□□□ -0.28
TCF4-233ENST00000566376 CC2D2AQ9P2K1 1620 aa13.24□□□□□ -0.29
TCF4-233ENST00000566376 EIF4G1Q04637 1599 aaKnown RBP13.24□□□□□ -0.29
TCF4-233ENST00000566376 GABBR2O75899 941 aa13.13□□□□□ -0.31
TCF4-233ENST00000566376 PRKAR2AP13861 404 aaKnown RBP13.12□□□□□ -0.31
TCF4-233ENST00000566376 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
TCF4-233ENST00000566376 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
TCF4-233ENST00000566376 C19orf67A6NJJ6 358 aa13.05□□□□□ -0.32
TCF4-233ENST00000566376 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
TCF4-233ENST00000566376 CECR2Q9BXF3 1484 aa13.03□□□□□ -0.32
TCF4-233ENST00000566376 SMARCA4P51532 1647 aa12.93□□□□□ -0.34
TCF4-233ENST00000566376 SPDYE1Q8NFV5 336 aaPredicted RBP12.88□□□□□ -0.35
TCF4-233ENST00000566376 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
TCF4-233ENST00000566376 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
TCF4-233ENST00000566376 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
TCF4-233ENST00000566376 CHADLQ6NUI6 762 aa12.82□□□□□ -0.36
TCF4-233ENST00000566376 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
TCF4-233ENST00000566376 FOXD4L1Q9NU39 408 aa12.81□□□□□ -0.36
TCF4-233ENST00000566376 POTEIP0CG38 1075 aa12.8□□□□□ -0.36
TCF4-233ENST00000566376 CSRNP3Q8WYN3 585 aa12.8□□□□□ -0.36
TCF4-233ENST00000566376 HMGXB3Q12766 1538 aa12.79□□□□□ -0.36
TCF4-233ENST00000566376 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
TCF4-233ENST00000566376 BAZ1AQ9NRL2 1556 aaPredicted RBP12.78□□□□□ -0.36
TCF4-233ENST00000566376 MROH2BQ7Z745 1585 aa12.77□□□□□ -0.37
TCF4-233ENST00000566376 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
TCF4-233ENST00000566376 SMARCA2P51531 1590 aa12.74□□□□□ -0.37
TCF4-233ENST00000566376 FBLN2P98095 1184 aa12.71□□□□□ -0.37
TCF4-233ENST00000566376 WIZO95785 1651 aa12.7□□□□□ -0.38
TCF4-233ENST00000566376 DCBLD2Q96PD2 775 aa12.67□□□□□ -0.38
TCF4-233ENST00000566376 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms