RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 AEBP2Q6ZN18 517 aaPredicted RBP13.5□□□□□ -0.25
TCF4-215ENST00000562638 CHIC1Q5VXU3 224 aa12.59□□□□□ -0.39
TCF4-215ENST00000562638 SENP3Q9H4L4 574 aaPredicted RBP11.46□□□□□ -0.57
TCF4-215ENST00000562638 PHF23Q9BUL5 403 aaPredicted RBP11.35□□□□□ -0.59
TCF4-215ENST00000562638 FOXD1Q16676 465 aa10.77□□□□□ -0.69
TCF4-215ENST00000562638 POTEDQ86YR6 584 aa10.2□□□□□ -0.78
TCF4-215ENST00000562638 MSH5O43196 834 aa10.07□□□□□ -0.8
TCF4-215ENST00000562638 PPP6R1Q9UPN7 881 aa9.97□□□□□ -0.81
TCF4-215ENST00000562638 PIAS4Q8N2W9 510 aaPredicted RBP9.96□□□□□ -0.82
TCF4-215ENST00000562638 PLPPR3Q6T4P5 718 aa9.95□□□□□ -0.82
TCF4-215ENST00000562638 ADRA2BP18089 450 aa9.9□□□□□ -0.82
TCF4-215ENST00000562638 PELP1Q8IZL8 1130 aaKnown RBP9.24□□□□□ -0.93
TCF4-215ENST00000562638 MYT1Q01538 1121 aa9.18□□□□□ -0.94
TCF4-215ENST00000562638 MAPK8IP2Q13387 824 aaPredicted RBP9.18□□□□□ -0.94
TCF4-215ENST00000562638 DMRT2Q9Y5R5 561 aa9.08□□□□□ -0.96
TCF4-215ENST00000562638 SCAF1Q9H7N4 1312 aaKnown RBP8.99□□□□□ -0.97
TCF4-215ENST00000562638 TTBK1Q5TCY1 1321 aaPredicted RBP8.97□□□□□ -0.97
TCF4-215ENST00000562638 CACNB1Q02641 598 aaPredicted RBP8.78□□□□□ -1
TCF4-215ENST00000562638 PPP4R3CPQ6ZMV5 832 aa8.73□□□□□ -1.01
TCF4-215ENST00000562638 DCAF8L1A6NGE4 600 aa8.7□□□□□ -1.02
TCF4-215ENST00000562638 HOXD11P31277 338 aaPredicted RBP8.69□□□□□ -1.02
TCF4-215ENST00000562638 RNF39Q9H2S5 420 aa8.62□□□□□ -1.03
TCF4-215ENST00000562638 SLC24A1O60721 1099 aa8.61□□□□□ -1.03
TCF4-215ENST00000562638 CNKSR2Q8WXI2 1034 aa8.59□□□□□ -1.03
TCF4-215ENST00000562638 PRKCSHP14314 528 aaPredicted RBP8.57□□□□□ -1.04
TCF4-215ENST00000562638 APLP2Q06481 763 aa8.57□□□□□ -1.04
TCF4-215ENST00000562638 RNF216Q9NWF9 866 aaPredicted RBP8.56□□□□□ -1.04
TCF4-215ENST00000562638 C1QBPQ07021 282 aaKnown RBP8.46□□□□□ -1.06
TCF4-215ENST00000562638 ERICH6Q7L0X2 663 aa8.45□□□□□ -1.06
TCF4-215ENST00000562638 DNAJC5BQ9UF47 199 aa8.4□□□□□ -1.06
TCF4-215ENST00000562638 NCBP3Q53F19 620 aaKnown RBP8.29□□□□□ -1.08
TCF4-215ENST00000562638 DAXXQ9UER7 740 aaPredicted RBP8.27□□□□□ -1.09
TCF4-215ENST00000562638 HRCP23327 699 aa8.25□□□□□ -1.09
TCF4-215ENST00000562638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.25□□□□□ -1.09
TCF4-215ENST00000562638 NPM3O75607 178 aaKnown RBP8.23□□□□□ -1.09
TCF4-215ENST00000562638 BCL11AQ9H165 835 aa8.22□□□□□ -1.09
TCF4-215ENST00000562638 FAM9AQ8IZU1 332 aaPredicted RBP8.11□□□□□ -1.11
TCF4-215ENST00000562638 U3KPZ7 1027 aaPredicted RBP8.09□□□□□ -1.11
TCF4-215ENST00000562638 SPINK5Q9NQ38 1064 aaPredicted RBP8.04□□□□□ -1.12
TCF4-215ENST00000562638 DSG3P32926 999 aa8.02□□□□□ -1.13
TCF4-215ENST00000562638 CAPN15O75808 1086 aa7.99□□□□□ -1.13
TCF4-215ENST00000562638 POTEHQ6S545 545 aa7.94□□□□□ -1.14
TCF4-215ENST00000562638 SLC4A2P04920 1241 aa7.93□□□□□ -1.14
TCF4-215ENST00000562638 KCNA4P22459 653 aa7.91□□□□□ -1.14
TCF4-215ENST00000562638 CENPBP07199 599 aaPredicted RBP7.9□□□□□ -1.14
TCF4-215ENST00000562638 EIF5BO60841 1220 aaKnown RBP7.88□□□□□ -1.15
TCF4-215ENST00000562638 TRHP20396 242 aaPredicted RBP7.84□□□□□ -1.15
TCF4-215ENST00000562638 ABCB7O75027 752 aa7.81□□□□□ -1.16
TCF4-215ENST00000562638 UBE2Q2Q8WVN8 375 aa7.77□□□□□ -1.17
TCF4-215ENST00000562638 ZNF219Q9P2Y4 722 aaPredicted RBP7.77□□□□□ -1.17
TCF4-215ENST00000562638 PPARGC1BQ86YN6 1023 aaKnown RBP7.76□□□□□ -1.17
TCF4-215ENST00000562638 ACIN1Q9UKV3 1341 aaKnown RBP7.76□□□□□ -1.17
TCF4-215ENST00000562638 ANP32EQ9BTT0 268 aa7.75□□□□□ -1.17
TCF4-215ENST00000562638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.72□□□□□ -1.17
TCF4-215ENST00000562638 HNRNPUL2Q1KMD3 747 aaKnown RBP7.72□□□□□ -1.17
TCF4-215ENST00000562638 SAMD1Q6SPF0 538 aaPredicted RBP7.68□□□□□ -1.18
TCF4-215ENST00000562638 PLEKHG5O94827 1062 aa7.63□□□□□ -1.19
TCF4-215ENST00000562638 NEUROD1Q13562 356 aa7.6□□□□□ -1.19
TCF4-215ENST00000562638 POLA2Q14181 598 aa7.6□□□□□ -1.19
TCF4-215ENST00000562638 CSRNP3Q8WYN3 585 aa7.6□□□□□ -1.19
TCF4-215ENST00000562638 ZEB1P37275 1124 aaPredicted RBP7.59□□□□□ -1.19
TCF4-215ENST00000562638 RBM42Q9BTD8 480 aaKnown RBP7.59□□□□□ -1.19
TCF4-215ENST00000562638 GTF3C3Q9Y5Q9 886 aa7.59□□□□□ -1.19
TCF4-215ENST00000562638 ARXQ96QS3 562 aa7.58□□□□□ -1.2
TCF4-215ENST00000562638 MYCNP04198 464 aaPredicted RBP7.56□□□□□ -1.2
TCF4-215ENST00000562638 PODXL2Q9NZ53 605 aa7.54□□□□□ -1.2
TCF4-215ENST00000562638 CHRDL2Q6WN34 429 aa7.53□□□□□ -1.2
TCF4-215ENST00000562638 ANO8Q9HCE9 1232 aaPredicted RBP7.53□□□□□ -1.2
TCF4-215ENST00000562638 PKNOX2Q96KN3 472 aa7.5□□□□□ -1.21
TCF4-215ENST00000562638 ATF5Q9Y2D1 282 aaPredicted RBP7.49□□□□□ -1.21
TCF4-215ENST00000562638 ERICH6BQ5W0A0 696 aa7.48□□□□□ -1.21
TCF4-215ENST00000562638 CCDC180Q9P1Z9 1646 aa7.48□□□□□ -1.21
TCF4-215ENST00000562638 MYO15BQ96JP2 1530 aa7.44□□□□□ -1.22
TCF4-215ENST00000562638 PCGF6Q9BYE7 350 aa7.44□□□□□ -1.22
TCF4-215ENST00000562638 DCAF1Q9Y4B6 1507 aa7.43□□□□□ -1.22
TCF4-215ENST00000562638 RANGAP1P46060 587 aaPredicted RBP7.42□□□□□ -1.22
TCF4-215ENST00000562638 AKT1S1Q96B36 256 aa7.41□□□□□ -1.22
TCF4-215ENST00000562638 SLC4A1APQ9BWU0 796 aaKnown RBP7.4□□□□□ -1.22
TCF4-215ENST00000562638 FOXD4L1Q9NU39 408 aa7.4□□□□□ -1.22
TCF4-215ENST00000562638 MYT1LQ9UL68 1186 aa7.4□□□□□ -1.22
TCF4-215ENST00000562638 KLHL34Q8N239 644 aa7.39□□□□□ -1.23
TCF4-215ENST00000562638 CLSPNQ9HAW4 1339 aa7.38□□□□□ -1.23
TCF4-215ENST00000562638 REM2Q8IYK8 340 aaPredicted RBP7.37□□□□□ -1.23
TCF4-215ENST00000562638 SP7Q8TDD2 431 aaPredicted RBP7.35□□□□□ -1.23
TCF4-215ENST00000562638 SALL2Q9Y467 1007 aaPredicted RBP7.35□□□□□ -1.23
TCF4-215ENST00000562638 NEFLP07196 543 aa7.34□□□□□ -1.23
TCF4-215ENST00000562638 PDIA4P13667 645 aaKnown RBP7.34□□□□□ -1.23
TCF4-215ENST00000562638 OSCARQ8IYS5 282 aa7.34□□□□□ -1.23
TCF4-215ENST00000562638 TSHZ2Q9NRE2 1034 aa7.34□□□□□ -1.23
TCF4-215ENST00000562638 ZBTB12Q9Y330 459 aaPredicted RBP7.34□□□□□ -1.23
TCF4-215ENST00000562638 PIP4P2Q8N4L2 257 aa7.33□□□□□ -1.24
TCF4-215ENST00000562638 ZBTB22O15209 634 aa7.29□□□□□ -1.24
TCF4-215ENST00000562638 PDE4CQ08493 712 aa7.29□□□□□ -1.24
TCF4-215ENST00000562638 TIMELESSQ9UNS1 1208 aa7.29□□□□□ -1.24
TCF4-215ENST00000562638 PITPNM1O00562 1244 aa7.28□□□□□ -1.24
TCF4-215ENST00000562638 FXR2P51116 673 aaKnown RBP eCLIP7.27□□□□□ -1.25
TCF4-215ENST00000562638 HAX1O00165 279 aa7.25□□□□□ -1.25
TCF4-215ENST00000562638 FGD1P98174 961 aa7.25□□□□□ -1.25
TCF4-215ENST00000562638 RTN4Q9NQC3 1192 aaKnown RBP7.25□□□□□ -1.25
TCF4-215ENST00000562638 HOMEZQ8IX15 550 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 187.3 ms