RNA–Protein interactions for RNA: ENST00000636751.2

TCF4-280, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 8,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-280ENST00000636751 NISCHQ9Y2I1 1504 aa9.47□□□□□ -0.89
TCF4-280ENST00000636751 CCDC180Q9P1Z9 1646 aa8.88□□□□□ -0.99
TCF4-280ENST00000636751 NACADO15069 1562 aa8.23□□□□□ -1.09
TCF4-280ENST00000636751 RB1CC1Q8TDY2 1594 aa8.23□□□□□ -1.09
TCF4-280ENST00000636751 MYO15BQ96JP2 1530 aa8.17□□□□□ -1.1
TCF4-280ENST00000636751 MYT1Q01538 1121 aa8.17□□□□□ -1.1
TCF4-280ENST00000636751 DCAF1Q9Y4B6 1507 aa8.11□□□□□ -1.11
TCF4-280ENST00000636751 SHROOM4Q9ULL8 1493 aa8.1□□□□□ -1.11
TCF4-280ENST00000636751 PELP1Q8IZL8 1130 aaKnown RBP8.08□□□□□ -1.12
TCF4-280ENST00000636751 DCAF8L2P0C7V8 631 aa8.05□□□□□ -1.12
TCF4-280ENST00000636751 FAM9AQ8IZU1 332 aaPredicted RBP8.04□□□□□ -1.12
TCF4-280ENST00000636751 TTBK1Q5TCY1 1321 aaPredicted RBP7.95□□□□□ -1.14
TCF4-280ENST00000636751 ZCCHC6Q5VYS8 1495 aaKnown RBP7.88□□□□□ -1.15
TCF4-280ENST00000636751 ABCC9O60706 1549 aa7.86□□□□□ -1.15
TCF4-280ENST00000636751 SMARCA2P51531 1590 aa7.7□□□□□ -1.18
TCF4-280ENST00000636751 BAZ1AQ9NRL2 1556 aaPredicted RBP7.67□□□□□ -1.18
TCF4-280ENST00000636751 UNC13AQ9UPW8 1703 aa7.67□□□□□ -1.18
TCF4-280ENST00000636751 SCRIBQ14160 1630 aa7.65□□□□□ -1.18
TCF4-280ENST00000636751 ERICH6Q7L0X2 663 aa7.62□□□□□ -1.19
TCF4-280ENST00000636751 PRDM2Q13029 1718 aa7.62□□□□□ -1.19
TCF4-280ENST00000636751 BAZ1BQ9UIG0 1483 aaKnown RBP7.59□□□□□ -1.19
TCF4-280ENST00000636751 RANGAP1P46060 587 aaPredicted RBP7.58□□□□□ -1.2
TCF4-280ENST00000636751 SLC24A1O60721 1099 aa7.57□□□□□ -1.2
TCF4-280ENST00000636751 ABCC8Q09428 1581 aa7.51□□□□□ -1.21
TCF4-280ENST00000636751 EHMT2Q96KQ7 1210 aa7.44□□□□□ -1.22
TCF4-280ENST00000636751 HMGXB3Q12766 1538 aa7.44□□□□□ -1.22
TCF4-280ENST00000636751 SMARCA4P51532 1647 aa7.44□□□□□ -1.22
TCF4-280ENST00000636751 ACIN1Q9UKV3 1341 aaKnown RBP7.41□□□□□ -1.22
TCF4-280ENST00000636751 APLP2Q06481 763 aa7.41□□□□□ -1.22
TCF4-280ENST00000636751 PDS5BQ9NTI5 1447 aa7.39□□□□□ -1.23
TCF4-280ENST00000636751 WDR97A6NE52 1622 aa7.36□□□□□ -1.23
TCF4-280ENST00000636751 ERCC6Q03468 1493 aa7.35□□□□□ -1.23
TCF4-280ENST00000636751 LAMC3Q9Y6N6 1575 aa7.35□□□□□ -1.23
TCF4-280ENST00000636751 EIF4G1Q04637 1599 aaKnown RBP7.35□□□□□ -1.23
TCF4-280ENST00000636751 YTHDC1Q96MU7 727 aaKnown RBP7.34□□□□□ -1.23
TCF4-280ENST00000636751 EEA1Q15075 1411 aa7.34□□□□□ -1.23
TCF4-280ENST00000636751 PEG3Q9GZU2 1588 aa7.33□□□□□ -1.24
TCF4-280ENST00000636751 TOP2AP11388 1531 aaKnown RBP7.33□□□□□ -1.24
TCF4-280ENST00000636751 CCER1Q8TC90 406 aaPredicted RBP7.29□□□□□ -1.24
TCF4-280ENST00000636751 SUPT5HO00267 1087 aaKnown RBP7.27□□□□□ -1.25
TCF4-280ENST00000636751 CC2D2AQ9P2K1 1620 aa7.26□□□□□ -1.25
TCF4-280ENST00000636751 CECR2Q9BXF3 1484 aa7.25□□□□□ -1.25
TCF4-280ENST00000636751 NCAPD3P42695 1498 aa7.23□□□□□ -1.25
TCF4-280ENST00000636751 DAXXQ9UER7 740 aaPredicted RBP7.21□□□□□ -1.25
TCF4-280ENST00000636751 PABPN1Q86U42 306 aaKnown RBP eCLIP7.21□□□□□ -1.26
TCF4-280ENST00000636751 CEP164Q9UPV0 1460 aa7.2□□□□□ -1.26
TCF4-280ENST00000636751 TRIM41Q8WV44 630 aa7.19□□□□□ -1.26
TCF4-280ENST00000636751 BICRAQ9NZM4 1560 aa7.19□□□□□ -1.26
TCF4-280ENST00000636751 POLR3GLQ9BT43 218 aa7.17□□□□□ -1.26
TCF4-280ENST00000636751 CDK11AQ9UQ88 783 aaPredicted RBP7.17□□□□□ -1.26
TCF4-280ENST00000636751 CUL7Q14999 1698 aa7.16□□□□□ -1.26
TCF4-280ENST00000636751 KIF21AQ7Z4S6 1674 aa7.16□□□□□ -1.26
TCF4-280ENST00000636751 ATAD2BQ9ULI0 1458 aa7.15□□□□□ -1.27
TCF4-280ENST00000636751 WRNQ14191 1432 aaPredicted RBP eCLIP7.14□□□□□ -1.27
TCF4-280ENST00000636751 MYT1LQ9UL68 1186 aa7.14□□□□□ -1.27
TCF4-280ENST00000636751 CUX2O14529 1486 aa7.13□□□□□ -1.27
TCF4-280ENST00000636751 KIF27Q86VH2 1401 aa7.13□□□□□ -1.27
TCF4-280ENST00000636751 GLIPR1L2Q4G1C9 344 aa7.12□□□□□ -1.27
TCF4-280ENST00000636751 NPM1P06748 294 aaKnown RBP eCLIP7.12□□□□□ -1.27
TCF4-280ENST00000636751 GOLGA3Q08378 1498 aa7.11□□□□□ -1.27
TCF4-280ENST00000636751 WIZO95785 1651 aa7.11□□□□□ -1.27
TCF4-280ENST00000636751 CADPSQ9ULU8 1353 aa7.1□□□□□ -1.27
TCF4-280ENST00000636751 DNMBPQ6XZF7 1577 aa7.1□□□□□ -1.27
TCF4-280ENST00000636751 PRKCSHP14314 528 aaPredicted RBP7.1□□□□□ -1.27
TCF4-280ENST00000636751 MRC2Q9UBG0 1479 aa7.08□□□□□ -1.28
TCF4-280ENST00000636751 RSF1Q96T23 1441 aaPredicted RBP7.07□□□□□ -1.28
TCF4-280ENST00000636751 CARMIL2Q6F5E8 1435 aa7.07□□□□□ -1.28
TCF4-280ENST00000636751 CEP162Q5TB80 1403 aa7.05□□□□□ -1.28
TCF4-280ENST00000636751 CENPBP07199 599 aaPredicted RBP7.05□□□□□ -1.28
TCF4-280ENST00000636751 IFT140Q96RY7 1462 aa7.05□□□□□ -1.28
TCF4-280ENST00000636751 FHAD1B1AJZ9 1412 aa7.04□□□□□ -1.28
TCF4-280ENST00000636751 KAT6BQ8WYB5 2073 aa7.03□□□□□ -1.28
TCF4-280ENST00000636751 SYNJ1O43426 1573 aa7.02□□□□□ -1.28
TCF4-280ENST00000636751 UBTFP17480 764 aaKnown RBP7.02□□□□□ -1.28
TCF4-280ENST00000636751 FANCD2Q9BXW9 1451 aa7.02□□□□□ -1.29
TCF4-280ENST00000636751 CTTNBP2Q8WZ74 1663 aa7.01□□□□□ -1.29
TCF4-280ENST00000636751 CFTRP13569 1480 aa7.01□□□□□ -1.29
TCF4-280ENST00000636751 MROH2BQ7Z745 1585 aa7.01□□□□□ -1.29
TCF4-280ENST00000636751 PBRM1Q86U86 1689 aa7.01□□□□□ -1.29
TCF4-280ENST00000636751 EIF5BO60841 1220 aaKnown RBP7.01□□□□□ -1.29
TCF4-280ENST00000636751 BIVM-ERCC5R4GMW8 1640 aa7.01□□□□□ -1.29
TCF4-280ENST00000636751 CLIP1P30622 1438 aa7□□□□□ -1.29
TCF4-280ENST00000636751 MAGI1Q96QZ7 1491 aaPredicted RBP7□□□□□ -1.29
TCF4-280ENST00000636751 TOP2BQ02880 1626 aa6.99□□□□□ -1.29
TCF4-280ENST00000636751 CHMP7Q8WUX9 453 aaPredicted RBP6.99□□□□□ -1.29
TCF4-280ENST00000636751 RTL5Q5HYW3 569 aaPredicted RBP6.98□□□□□ -1.29
TCF4-280ENST00000636751 ERICH3Q5RHP9 1530 aa6.96□□□□□ -1.3
TCF4-280ENST00000636751 EFCAB5A4FU69 1503 aa6.96□□□□□ -1.3
TCF4-280ENST00000636751 GRIN2BQ13224 1484 aa6.95□□□□□ -1.3
TCF4-280ENST00000636751 CFAP74Q9C0B2 1584 aa6.95□□□□□ -1.3
TCF4-280ENST00000636751 FMN1Q68DA7 1419 aa6.94□□□□□ -1.3
TCF4-280ENST00000636751 CCDC88BA6NC98 1476 aa6.94□□□□□ -1.3
TCF4-280ENST00000636751 ZEB1P37275 1124 aaPredicted RBP6.93□□□□□ -1.3
TCF4-280ENST00000636751 WDR62O43379 1518 aa6.92□□□□□ -1.3
TCF4-280ENST00000636751 KIF21BO75037 1637 aa6.92□□□□□ -1.3
TCF4-280ENST00000636751 SCAF1Q9H7N4 1312 aaKnown RBP6.92□□□□□ -1.3
TCF4-280ENST00000636751 ESF1Q9H501 851 aaKnown RBP6.91□□□□□ -1.3
TCF4-280ENST00000636751 SOGA1O94964 1423 aa6.91□□□□□ -1.3
TCF4-280ENST00000636751 CCDC18Q5T9S5 1454 aa6.9□□□□□ -1.31
TCF4-280ENST00000636751 GAPVD1Q14C86 1478 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 221 ms