RNA–Protein interactions for RNA: ENST00000637239.2

TCF4-285, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-285ENST00000637239 DCAF8L2P0C7V8 631 aa11.72□□□□□ -0.53
TCF4-285ENST00000637239 NISCHQ9Y2I1 1504 aa11.41□□□□□ -0.58
TCF4-285ENST00000637239 FAM9AQ8IZU1 332 aaPredicted RBP10.95□□□□□ -0.66
TCF4-285ENST00000637239 SUPT5HO00267 1087 aaKnown RBP10.52□□□□□ -0.73
TCF4-285ENST00000637239 APLP2Q06481 763 aa10.51□□□□□ -0.73
TCF4-285ENST00000637239 SHROOM4Q9ULL8 1493 aa10.41□□□□□ -0.74
TCF4-285ENST00000637239 EHMT2Q96KQ7 1210 aa10.37□□□□□ -0.75
TCF4-285ENST00000637239 PELP1Q8IZL8 1130 aaKnown RBP10.22□□□□□ -0.77
TCF4-285ENST00000637239 ATP1B4Q9UN42 357 aaPredicted RBP10.22□□□□□ -0.77
TCF4-285ENST00000637239 MYT1LQ9UL68 1186 aa10.18□□□□□ -0.78
TCF4-285ENST00000637239 RANGAP1P46060 587 aaPredicted RBP10.07□□□□□ -0.8
TCF4-285ENST00000637239 MYT1Q01538 1121 aa10.02□□□□□ -0.81
TCF4-285ENST00000637239 TTBK1Q5TCY1 1321 aaPredicted RBP10.02□□□□□ -0.81
TCF4-285ENST00000637239 ABCC9O60706 1549 aa9.99□□□□□ -0.81
TCF4-285ENST00000637239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.98□□□□□ -0.81
TCF4-285ENST00000637239 HNRNPUL2Q1KMD3 747 aaKnown RBP9.98□□□□□ -0.81
TCF4-285ENST00000637239 UBTFP17480 764 aaKnown RBP9.91□□□□□ -0.82
TCF4-285ENST00000637239 ERICH6Q7L0X2 663 aa9.89□□□□□ -0.83
TCF4-285ENST00000637239 TRIM41Q8WV44 630 aa9.88□□□□□ -0.83
TCF4-285ENST00000637239 PCGF6Q9BYE7 350 aa9.86□□□□□ -0.83
TCF4-285ENST00000637239 CCDC180Q9P1Z9 1646 aa9.85□□□□□ -0.83
TCF4-285ENST00000637239 CHIC1Q5VXU3 224 aa9.83□□□□□ -0.84
TCF4-285ENST00000637239 CCER1Q8TC90 406 aaPredicted RBP9.78□□□□□ -0.84
TCF4-285ENST00000637239 CENPBP07199 599 aaPredicted RBP9.74□□□□□ -0.85
TCF4-285ENST00000637239 SLC4A1APQ9BWU0 796 aaKnown RBP9.7□□□□□ -0.86
TCF4-285ENST00000637239 FBLN2P98095 1184 aa9.68□□□□□ -0.86
TCF4-285ENST00000637239 PABPN1Q86U42 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
TCF4-285ENST00000637239 RB1CC1Q8TDY2 1594 aa9.65□□□□□ -0.86
TCF4-285ENST00000637239 ZEB1P37275 1124 aaPredicted RBP9.64□□□□□ -0.87
TCF4-285ENST00000637239 ESF1Q9H501 851 aaKnown RBP9.64□□□□□ -0.87
TCF4-285ENST00000637239 NEFLP07196 543 aa9.63□□□□□ -0.87
TCF4-285ENST00000637239 BCANQ96GW7 911 aa9.63□□□□□ -0.87
TCF4-285ENST00000637239 YTHDC1Q96MU7 727 aaKnown RBP9.61□□□□□ -0.87
TCF4-285ENST00000637239 POLR3GLQ9BT43 218 aa9.58□□□□□ -0.88
TCF4-285ENST00000637239 NPM1P06748 294 aaKnown RBP eCLIP9.58□□□□□ -0.88
TCF4-285ENST00000637239 NACADO15069 1562 aa9.56□□□□□ -0.88
TCF4-285ENST00000637239 PPARGC1BQ86YN6 1023 aaKnown RBP9.53□□□□□ -0.88
TCF4-285ENST00000637239 ITGAEP38570 1179 aa9.51□□□□□ -0.89
TCF4-285ENST00000637239 DAXXQ9UER7 740 aaPredicted RBP9.46□□□□□ -0.9
TCF4-285ENST00000637239 PLPPR3Q6T4P5 718 aa9.44□□□□□ -0.9
TCF4-285ENST00000637239 STAG3Q9UJ98 1225 aa9.42□□□□□ -0.9
TCF4-285ENST00000637239 SLC24A1O60721 1099 aa9.42□□□□□ -0.9
TCF4-285ENST00000637239 ZCCHC6Q5VYS8 1495 aaKnown RBP9.41□□□□□ -0.9
TCF4-285ENST00000637239 CNGB1Q14028 1251 aaPredicted RBP9.41□□□□□ -0.9
TCF4-285ENST00000637239 TRIM52Q96A61 297 aa9.41□□□□□ -0.9
TCF4-285ENST00000637239 SCRIBQ14160 1630 aa9.4□□□□□ -0.9
TCF4-285ENST00000637239 FAM50AQ14320 339 aaKnown RBP9.38□□□□□ -0.91
TCF4-285ENST00000637239 NEFMP07197 916 aa9.38□□□□□ -0.91
TCF4-285ENST00000637239 CDK11AQ9UQ88 783 aaPredicted RBP9.36□□□□□ -0.91
TCF4-285ENST00000637239 ZBTB47Q9UFB7 747 aaPredicted RBP9.34□□□□□ -0.91
TCF4-285ENST00000637239 TRIM26Q12899 539 aaPredicted RBP9.32□□□□□ -0.92
TCF4-285ENST00000637239 DCAF1Q9Y4B6 1507 aa9.31□□□□□ -0.92
TCF4-285ENST00000637239 MYO15BQ96JP2 1530 aa9.27□□□□□ -0.93
TCF4-285ENST00000637239 SCAF1Q9H7N4 1312 aaKnown RBP9.25□□□□□ -0.93
TCF4-285ENST00000637239 ZNF777Q9ULD5 760 aaPredicted RBP9.25□□□□□ -0.93
TCF4-285ENST00000637239 ERCC6Q03468 1493 aa9.25□□□□□ -0.93
TCF4-285ENST00000637239 CLSPNQ9HAW4 1339 aa9.23□□□□□ -0.93
TCF4-285ENST00000637239 ZNF316A6NFI3 1004 aaPredicted RBP9.23□□□□□ -0.93
TCF4-285ENST00000637239 CHGAP10645 457 aaKnown RBP9.23□□□□□ -0.93
TCF4-285ENST00000637239 CHMP7Q8WUX9 453 aaPredicted RBP9.23□□□□□ -0.93
TCF4-285ENST00000637239 TRHP20396 242 aaPredicted RBP9.22□□□□□ -0.93
TCF4-285ENST00000637239 HRCP23327 699 aa9.22□□□□□ -0.93
TCF4-285ENST00000637239 ZNF326Q5BKZ1 582 aaKnown RBP9.21□□□□□ -0.93
TCF4-285ENST00000637239 ARID3CA6NKF2 412 aa9.21□□□□□ -0.93
TCF4-285ENST00000637239 ARID4BQ4LE39 1312 aaPredicted RBP9.21□□□□□ -0.93
TCF4-285ENST00000637239 LOC105371045A0A1W2PR82 267 aa9.2□□□□□ -0.94
TCF4-285ENST00000637239 C14orf37Q86TY3 774 aa9.19□□□□□ -0.94
TCF4-285ENST00000637239 A0A0G2JS52 829 aa9.18□□□□□ -0.94
TCF4-285ENST00000637239 HAP1P54257 671 aaPredicted RBP9.18□□□□□ -0.94
TCF4-285ENST00000637239 RTL5Q5HYW3 569 aaPredicted RBP9.15□□□□□ -0.94
TCF4-285ENST00000637239 NPM2Q86SE8 214 aaKnown RBP9.15□□□□□ -0.95
TCF4-285ENST00000637239 P3H3Q8IVL6 736 aa9.15□□□□□ -0.95
TCF4-285ENST00000637239 CANXP27824 592 aaKnown RBP9.14□□□□□ -0.95
TCF4-285ENST00000637239 BAZ1BQ9UIG0 1483 aaKnown RBP9.13□□□□□ -0.95
TCF4-285ENST00000637239 AEBP2Q6ZN18 517 aaPredicted RBP9.13□□□□□ -0.95
TCF4-285ENST00000637239 PPP1R15AO75807 674 aaPredicted RBP9.12□□□□□ -0.95
TCF4-285ENST00000637239 NEUROD1Q13562 356 aa9.1□□□□□ -0.95
TCF4-285ENST00000637239 BAZ1AQ9NRL2 1556 aaPredicted RBP9.09□□□□□ -0.95
TCF4-285ENST00000637239 DIEXFQ68CQ4 756 aaKnown RBP9.09□□□□□ -0.95
TCF4-285ENST00000637239 BCL11AQ9H165 835 aa9.07□□□□□ -0.96
TCF4-285ENST00000637239 SMARCA2P51531 1590 aa9.07□□□□□ -0.96
TCF4-285ENST00000637239 ZBTB7CA1YPR0 619 aa9.06□□□□□ -0.96
TCF4-285ENST00000637239 PDS5BQ9NTI5 1447 aa9.05□□□□□ -0.96
TCF4-285ENST00000637239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.04□□□□□ -0.96
TCF4-285ENST00000637239 TSPY4P0CV99 314 aa9.03□□□□□ -0.96
TCF4-285ENST00000637239 TSPY10P0CW01 314 aa9.03□□□□□ -0.96
TCF4-285ENST00000637239 KCNH8Q96L42 1107 aa9.01□□□□□ -0.97
TCF4-285ENST00000637239 CECR2Q9BXF3 1484 aa8.99□□□□□ -0.97
TCF4-285ENST00000637239 ANP32CO43423 234 aa8.98□□□□□ -0.97
TCF4-285ENST00000637239 NPHP1O15259 732 aa8.98□□□□□ -0.97
TCF4-285ENST00000637239 PLEKHG5O94827 1062 aa8.96□□□□□ -0.98
TCF4-285ENST00000637239 PLEKHD1A6NEE1 506 aa8.96□□□□□ -0.98
TCF4-285ENST00000637239 HDGFP51858 240 aaKnown RBP8.96□□□□□ -0.98
TCF4-285ENST00000637239 GTF3C3Q9Y5Q9 886 aa8.94□□□□□ -0.98
TCF4-285ENST00000637239 CSRNP3Q8WYN3 585 aa8.93□□□□□ -0.98
TCF4-285ENST00000637239 ACIN1Q9UKV3 1341 aaKnown RBP8.89□□□□□ -0.99
TCF4-285ENST00000637239 ARXQ96QS3 562 aa8.89□□□□□ -0.99
TCF4-285ENST00000637239 MTUS2Q5JR59 1369 aa8.89□□□□□ -0.99
TCF4-285ENST00000637239 LMOD2Q6P5Q4 547 aa8.88□□□□□ -0.99
TCF4-285ENST00000637239 CDK11BP21127 795 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms