RNA–Protein interactions for RNA: ENST00000465369.5

EDEM1-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 5

Gene EDEM1, Length 1,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-206ENST00000465369 NISCHQ9Y2I1 1504 aa51.98■■■■■ 5.91
EDEM1-206ENST00000465369 CCDC180Q9P1Z9 1646 aa44.97■■■■■ 4.79
EDEM1-206ENST00000465369 ZCCHC6Q5VYS8 1495 aaKnown RBP43.79■■■■■ 4.6
EDEM1-206ENST00000465369 DCAF1Q9Y4B6 1507 aa42.98■■■■■ 4.47
EDEM1-206ENST00000465369 SHROOM4Q9ULL8 1493 aa42.89■■■■■ 4.46
EDEM1-206ENST00000465369 DCAF8L2P0C7V8 631 aa42.82■■■■■ 4.45
EDEM1-206ENST00000465369 MYO15BQ96JP2 1530 aa42.25■■■■■ 4.35
EDEM1-206ENST00000465369 ABCC9O60706 1549 aa42.02■■■■■ 4.32
EDEM1-206ENST00000465369 NACADO15069 1562 aa41.79■■■■■ 4.28
EDEM1-206ENST00000465369 SUPT5HO00267 1087 aaKnown RBP41.62■■■■■ 4.25
EDEM1-206ENST00000465369 SCRIBQ14160 1630 aa41.47■■■■■ 4.23
EDEM1-206ENST00000465369 RB1CC1Q8TDY2 1594 aa41.28■■■■■ 4.2
EDEM1-206ENST00000465369 RSF1Q96T23 1441 aaPredicted RBP40.6■■■■■ 4.09
EDEM1-206ENST00000465369 UNC13AQ9UPW8 1703 aa40.39■■■■■ 4.06
EDEM1-206ENST00000465369 CECR2Q9BXF3 1484 aa40.35■■■■■ 4.05
EDEM1-206ENST00000465369 MROH2BQ7Z745 1585 aa40.18■■■■■ 4.02
EDEM1-206ENST00000465369 CHIC1Q5VXU3 224 aa40.17■■■■■ 4.02
EDEM1-206ENST00000465369 BAZ1AQ9NRL2 1556 aaPredicted RBP40.1■■■■■ 4.01
EDEM1-206ENST00000465369 BICRAQ9NZM4 1560 aa39.99■■■■□ 3.99
EDEM1-206ENST00000465369 WIZO95785 1651 aa39.86■■■■□ 3.97
EDEM1-206ENST00000465369 PABPN1Q86U42 306 aaKnown RBP eCLIP39.8■■■■□ 3.96
EDEM1-206ENST00000465369 SMARCA4P51532 1647 aa39.8■■■■□ 3.96
EDEM1-206ENST00000465369 TOP2AP11388 1531 aaKnown RBP39.48■■■■□ 3.91
EDEM1-206ENST00000465369 PEG3Q9GZU2 1588 aa39.3■■■■□ 3.88
EDEM1-206ENST00000465369 SMARCA2P51531 1590 aa39.13■■■■□ 3.85
EDEM1-206ENST00000465369 CCDC88BA6NC98 1476 aa39.12■■■■□ 3.85
EDEM1-206ENST00000465369 TRIM41Q8WV44 630 aa39.1■■■■□ 3.85
EDEM1-206ENST00000465369 ATAD2BQ9ULI0 1458 aa39.03■■■■□ 3.84
EDEM1-206ENST00000465369 EIF4G1Q04637 1599 aaKnown RBP39.02■■■■□ 3.84
EDEM1-206ENST00000465369 BAZ1BQ9UIG0 1483 aaKnown RBP38.84■■■■□ 3.81
EDEM1-206ENST00000465369 LOC105371045A0A1W2PR82 267 aa38.66■■■■□ 3.78
EDEM1-206ENST00000465369 NCAPD3P42695 1498 aa38.59■■■■□ 3.77
EDEM1-206ENST00000465369 HMGXB3Q12766 1538 aa38.56■■■■□ 3.76
EDEM1-206ENST00000465369 ABCC8Q09428 1581 aa38.47■■■■□ 3.75
EDEM1-206ENST00000465369 FAM9AQ8IZU1 332 aaPredicted RBP38.38■■■■□ 3.73
EDEM1-206ENST00000465369 WRNQ14191 1432 aaPredicted RBP eCLIP38.2■■■■□ 3.71
EDEM1-206ENST00000465369 CC2D2AQ9P2K1 1620 aa38.02■■■■□ 3.68
EDEM1-206ENST00000465369 EEA1Q15075 1411 aa38.02■■■■□ 3.68
EDEM1-206ENST00000465369 SYNJ1O43426 1573 aa37.96■■■■□ 3.67
EDEM1-206ENST00000465369 SOGA1O94964 1423 aa37.92■■■■□ 3.66
EDEM1-206ENST00000465369 CFTRP13569 1480 aa37.91■■■■□ 3.66
EDEM1-206ENST00000465369 EHMT2Q96KQ7 1210 aa37.8■■■■□ 3.64
EDEM1-206ENST00000465369 TOP2BQ02880 1626 aa37.78■■■■□ 3.64
EDEM1-206ENST00000465369 CSRNP3Q8WYN3 585 aa37.77■■■■□ 3.64
EDEM1-206ENST00000465369 RUSC2Q8N2Y8 1516 aa37.72■■■■□ 3.63
EDEM1-206ENST00000465369 BIVM-ERCC5R4GMW8 1640 aa37.7■■■■□ 3.63
EDEM1-206ENST00000465369 CADPSQ9ULU8 1353 aa37.68■■■■□ 3.62
EDEM1-206ENST00000465369 PRDM2Q13029 1718 aa37.65■■■■□ 3.62
EDEM1-206ENST00000465369 PCGF6Q9BYE7 350 aa37.58■■■■□ 3.61
EDEM1-206ENST00000465369 TNIKQ9UKE5 1360 aa37.53■■■■□ 3.6
EDEM1-206ENST00000465369 CUX1P39880 1505 aa37.52■■■■□ 3.6
EDEM1-206ENST00000465369 GOLGA3Q08378 1498 aa37.5■■■■□ 3.59
EDEM1-206ENST00000465369 TRIM26Q12899 539 aaPredicted RBP37.44■■■■□ 3.58
EDEM1-206ENST00000465369 CEP164Q9UPV0 1460 aa37.44■■■■□ 3.58
EDEM1-206ENST00000465369 KIF21BO75037 1637 aa37.43■■■■□ 3.58
EDEM1-206ENST00000465369 UBTFP17480 764 aaKnown RBP37.35■■■■□ 3.57
EDEM1-206ENST00000465369 CEP162Q5TB80 1403 aa37.35■■■■□ 3.57
EDEM1-206ENST00000465369 FANCD2Q9BXW9 1451 aa37.24■■■■□ 3.55
EDEM1-206ENST00000465369 KIF27Q86VH2 1401 aa37.2■■■■□ 3.55
EDEM1-206ENST00000465369 LAMC3Q9Y6N6 1575 aa37.15■■■■□ 3.54
EDEM1-206ENST00000465369 RAPGEF2Q9Y4G8 1499 aa37.11■■■■□ 3.53
EDEM1-206ENST00000465369 PRXQ9BXM0 1461 aa37.09■■■■□ 3.53
EDEM1-206ENST00000465369 NESP48681 1621 aa37.08■■■■□ 3.53
EDEM1-206ENST00000465369 ERICH3Q5RHP9 1530 aa37.08■■■■□ 3.53
EDEM1-206ENST00000465369 FGD5Q6ZNL6 1462 aa37.03■■■■□ 3.52
EDEM1-206ENST00000465369 HRCP23327 699 aa37.02■■■■□ 3.52
EDEM1-206ENST00000465369 DNMBPQ6XZF7 1577 aa36.99■■■■□ 3.51
EDEM1-206ENST00000465369 CUX2O14529 1486 aa36.93■■■■□ 3.5
EDEM1-206ENST00000465369 CLIP1P30622 1438 aa36.93■■■■□ 3.5
EDEM1-206ENST00000465369 PDS5BQ9NTI5 1447 aa36.9■■■■□ 3.5
EDEM1-206ENST00000465369 TOPBP1Q92547 1522 aa36.89■■■■□ 3.5
EDEM1-206ENST00000465369 DNAJC5BQ9UF47 199 aa36.89■■■■□ 3.5
EDEM1-206ENST00000465369 IGF1RP08069 1367 aa36.8■■■■□ 3.48
EDEM1-206ENST00000465369 PPARGC1BQ86YN6 1023 aaKnown RBP36.77■■■■□ 3.48
EDEM1-206ENST00000465369 POLA1P09884 1462 aaPredicted RBP36.76■■■■□ 3.48
EDEM1-206ENST00000465369 ABCA10Q8WWZ4 1543 aa36.73■■■■□ 3.47
EDEM1-206ENST00000465369 URB2Q14146 1524 aaKnown RBP36.71■■■■□ 3.47
EDEM1-206ENST00000465369 VPS8Q8N3P4 1428 aa36.69■■■■□ 3.46
EDEM1-206ENST00000465369 RAD54L2Q9Y4B4 1467 aa36.65■■■■□ 3.46
EDEM1-206ENST00000465369 CARMIL1Q5VZK9 1371 aa36.64■■■■□ 3.46
EDEM1-206ENST00000465369 KIF21AQ7Z4S6 1674 aa36.59■■■■□ 3.45
EDEM1-206ENST00000465369 RANGAP1P46060 587 aaPredicted RBP36.53■■■■□ 3.44
EDEM1-206ENST00000465369 WDR97A6NE52 1622 aa36.47■■■■□ 3.43
EDEM1-206ENST00000465369 ARAP1Q96P48 1450 aa36.45■■■■□ 3.42
EDEM1-206ENST00000465369 APLP2Q06481 763 aa36.42■■■■□ 3.42
EDEM1-206ENST00000465369 CUL7Q14999 1698 aa36.4■■■■□ 3.42
EDEM1-206ENST00000465369 TTBK1Q5TCY1 1321 aaPredicted RBP36.35■■■■□ 3.41
EDEM1-206ENST00000465369 MRC2Q9UBG0 1479 aa36.34■■■■□ 3.41
EDEM1-206ENST00000465369 ARHGAP35Q9NRY4 1499 aa36.33■■■■□ 3.41
EDEM1-206ENST00000465369 ABCA5Q8WWZ7 1642 aa36.33■■■■□ 3.41
EDEM1-206ENST00000465369 ZEB1P37275 1124 aaPredicted RBP36.31■■■■□ 3.4
EDEM1-206ENST00000465369 GAPVD1Q14C86 1478 aa36.28■■■■□ 3.4
EDEM1-206ENST00000465369 TDRD9Q8NDG6 1382 aaKnown RBP36.27■■■■□ 3.4
EDEM1-206ENST00000465369 TARBP1Q13395 1621 aaKnown RBP36.25■■■■□ 3.39
EDEM1-206ENST00000465369 WDR62O43379 1518 aa36.11■■■■□ 3.37
EDEM1-206ENST00000465369 CTTNBP2Q8WZ74 1663 aa36.05■■■■□ 3.36
EDEM1-206ENST00000465369 EFCAB5A4FU69 1503 aa36.02■■■■□ 3.36
EDEM1-206ENST00000465369 IFT140Q96RY7 1462 aa36.02■■■■□ 3.36
EDEM1-206ENST00000465369 ERCC6Q03468 1493 aa35.99■■■■□ 3.35
EDEM1-206ENST00000465369 FHAD1B1AJZ9 1412 aa35.99■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms