RNA–Protein interactions for RNA: ENST00000448704.5

COA1-212, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 1 (best)

Gene COA1, Length 1,599 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-212ENST00000448704 NISCHQ9Y2I1 1504 aa40.88■■■■■ 4.13
COA1-212ENST00000448704 CCDC180Q9P1Z9 1646 aa35.62■■■■□ 3.29
COA1-212ENST00000448704 ZCCHC6Q5VYS8 1495 aaKnown RBP34.34■■■■□ 3.09
COA1-212ENST00000448704 DCAF1Q9Y4B6 1507 aa33.81■■■■□ 3
COA1-212ENST00000448704 DCAF8L2P0C7V8 631 aa33.76■■■□□ 2.99
COA1-212ENST00000448704 ABCC9O60706 1549 aa33.72■■■□□ 2.99
COA1-212ENST00000448704 MYO15BQ96JP2 1530 aa33.41■■■□□ 2.94
COA1-212ENST00000448704 SHROOM4Q9ULL8 1493 aa33.33■■■□□ 2.93
COA1-212ENST00000448704 NACADO15069 1562 aa33.21■■■□□ 2.91
COA1-212ENST00000448704 RB1CC1Q8TDY2 1594 aa32.91■■■□□ 2.86
COA1-212ENST00000448704 SCRIBQ14160 1630 aa32.76■■■□□ 2.84
COA1-212ENST00000448704 UNC13AQ9UPW8 1703 aa32.21■■■□□ 2.75
COA1-212ENST00000448704 SUPT5HO00267 1087 aaKnown RBP32.07■■■□□ 2.72
COA1-212ENST00000448704 BICRAQ9NZM4 1560 aa31.93■■■□□ 2.7
COA1-212ENST00000448704 PABPN1Q86U42 306 aaKnown RBP eCLIP31.81■■■□□ 2.68
COA1-212ENST00000448704 CECR2Q9BXF3 1484 aa31.78■■■□□ 2.68
COA1-212ENST00000448704 RSF1Q96T23 1441 aaPredicted RBP31.72■■■□□ 2.67
COA1-212ENST00000448704 MROH2BQ7Z745 1585 aa31.58■■■□□ 2.65
COA1-212ENST00000448704 BAZ1AQ9NRL2 1556 aaPredicted RBP31.55■■■□□ 2.64
COA1-212ENST00000448704 SMARCA4P51532 1647 aa31.41■■■□□ 2.62
COA1-212ENST00000448704 WIZO95785 1651 aa31.31■■■□□ 2.6
COA1-212ENST00000448704 PEG3Q9GZU2 1588 aa31.04■■■□□ 2.56
COA1-212ENST00000448704 TOP2AP11388 1531 aaKnown RBP31■■■□□ 2.55
COA1-212ENST00000448704 EIF4G1Q04637 1599 aaKnown RBP30.96■■■□□ 2.55
COA1-212ENST00000448704 ATAD2BQ9ULI0 1458 aa30.93■■■□□ 2.54
COA1-212ENST00000448704 SMARCA2P51531 1590 aa30.88■■■□□ 2.53
COA1-212ENST00000448704 BAZ1BQ9UIG0 1483 aaKnown RBP30.73■■■□□ 2.51
COA1-212ENST00000448704 CHIC1Q5VXU3 224 aa30.72■■■□□ 2.51
COA1-212ENST00000448704 CCDC88BA6NC98 1476 aa30.7■■■□□ 2.5
COA1-212ENST00000448704 NCAPD3P42695 1498 aa30.66■■■□□ 2.5
COA1-212ENST00000448704 HMGXB3Q12766 1538 aa30.6■■■□□ 2.49
COA1-212ENST00000448704 CC2D2AQ9P2K1 1620 aa30.51■■■□□ 2.47
COA1-212ENST00000448704 TRIM41Q8WV44 630 aa30.15■■■□□ 2.42
COA1-212ENST00000448704 ABCC8Q09428 1581 aa30.01■■■□□ 2.4
COA1-212ENST00000448704 CFTRP13569 1480 aa29.97■■■□□ 2.39
COA1-212ENST00000448704 CADPSQ9ULU8 1353 aa29.88■■■□□ 2.37
COA1-212ENST00000448704 WRNQ14191 1432 aaPredicted RBP eCLIP29.85■■■□□ 2.37
COA1-212ENST00000448704 DNAJC5BQ9UF47 199 aa29.78■■■□□ 2.36
COA1-212ENST00000448704 PRDM2Q13029 1718 aa29.76■■■□□ 2.35
COA1-212ENST00000448704 SYNJ1O43426 1573 aa29.71■■■□□ 2.35
COA1-212ENST00000448704 NESP48681 1621 aa29.61■■■□□ 2.33
COA1-212ENST00000448704 FAM9AQ8IZU1 332 aaPredicted RBP29.6■■■□□ 2.33
COA1-212ENST00000448704 LAMC3Q9Y6N6 1575 aa29.59■■■□□ 2.33
COA1-212ENST00000448704 TOP2BQ02880 1626 aa29.59■■■□□ 2.33
COA1-212ENST00000448704 BIVM-ERCC5R4GMW8 1640 aa29.55■■■□□ 2.32
COA1-212ENST00000448704 FANCD2Q9BXW9 1451 aa29.54■■■□□ 2.32
COA1-212ENST00000448704 LOC105371045A0A1W2PR82 267 aa29.53■■■□□ 2.32
COA1-212ENST00000448704 CUX1P39880 1505 aa29.53■■■□□ 2.32
COA1-212ENST00000448704 SOGA1O94964 1423 aa29.48■■■□□ 2.31
COA1-212ENST00000448704 EEA1Q15075 1411 aa29.42■■■□□ 2.3
COA1-212ENST00000448704 PDS5BQ9NTI5 1447 aa29.39■■■□□ 2.29
COA1-212ENST00000448704 RUSC2Q8N2Y8 1516 aa29.37■■■□□ 2.29
COA1-212ENST00000448704 CEP164Q9UPV0 1460 aa29.33■■■□□ 2.29
COA1-212ENST00000448704 CSRNP3Q8WYN3 585 aa29.27■■■□□ 2.28
COA1-212ENST00000448704 DNMBPQ6XZF7 1577 aa29.26■■■□□ 2.27
COA1-212ENST00000448704 TOPBP1Q92547 1522 aa29.22■■■□□ 2.27
COA1-212ENST00000448704 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
COA1-212ENST00000448704 FGD5Q6ZNL6 1462 aa29.21■■■□□ 2.27
COA1-212ENST00000448704 URB2Q14146 1524 aaKnown RBP29.17■■■□□ 2.26
COA1-212ENST00000448704 EHMT2Q96KQ7 1210 aa29.17■■■□□ 2.26
COA1-212ENST00000448704 KIF27Q86VH2 1401 aa29.1■■■□□ 2.25
COA1-212ENST00000448704 POLA1P09884 1462 aaPredicted RBP29.07■■■□□ 2.24
COA1-212ENST00000448704 KIF21BO75037 1637 aa29.02■■■□□ 2.24
COA1-212ENST00000448704 CUX2O14529 1486 aa29.02■■■□□ 2.24
COA1-212ENST00000448704 MRC2Q9UBG0 1479 aa29.01■■■□□ 2.23
COA1-212ENST00000448704 GOLGA3Q08378 1498 aa29■■■□□ 2.23
COA1-212ENST00000448704 RAD54L2Q9Y4B4 1467 aa28.99■■■□□ 2.23
COA1-212ENST00000448704 ABCA10Q8WWZ4 1543 aa28.96■■■□□ 2.23
COA1-212ENST00000448704 TNIKQ9UKE5 1360 aa28.93■■■□□ 2.22
COA1-212ENST00000448704 PRXQ9BXM0 1461 aa28.91■■■□□ 2.22
COA1-212ENST00000448704 ERCC6Q03468 1493 aa28.89■■■□□ 2.22
COA1-212ENST00000448704 UBTFP17480 764 aaKnown RBP28.88■■■□□ 2.21
COA1-212ENST00000448704 RAPGEF2Q9Y4G8 1499 aa28.87■■■□□ 2.21
COA1-212ENST00000448704 IGF1RP08069 1367 aa28.86■■■□□ 2.21
COA1-212ENST00000448704 WDR62O43379 1518 aa28.85■■■□□ 2.21
COA1-212ENST00000448704 ERICH3Q5RHP9 1530 aa28.83■■■□□ 2.21
COA1-212ENST00000448704 WDR97A6NE52 1622 aa28.83■■■□□ 2.21
COA1-212ENST00000448704 TARBP1Q13395 1621 aaKnown RBP28.77■■■□□ 2.2
COA1-212ENST00000448704 THOC2Q8NI27 1593 aaKnown RBP28.76■■■□□ 2.19
COA1-212ENST00000448704 CEP162Q5TB80 1403 aa28.76■■■□□ 2.19
COA1-212ENST00000448704 CARMIL1Q5VZK9 1371 aa28.7■■■□□ 2.19
COA1-212ENST00000448704 TDRD9Q8NDG6 1382 aaKnown RBP28.7■■■□□ 2.19
COA1-212ENST00000448704 ABCA5Q8WWZ7 1642 aa28.7■■■□□ 2.19
COA1-212ENST00000448704 GAPVD1Q14C86 1478 aa28.66■■■□□ 2.18
COA1-212ENST00000448704 IFT140Q96RY7 1462 aa28.66■■■□□ 2.18
COA1-212ENST00000448704 CUL7Q14999 1698 aa28.59■■■□□ 2.17
COA1-212ENST00000448704 CLIP1P30622 1438 aa28.54■■■□□ 2.16
COA1-212ENST00000448704 AQRO60306 1485 aaKnown RBP eCLIP28.53■■■□□ 2.16
COA1-212ENST00000448704 ZNF608Q9ULD9 1512 aaPredicted RBP28.49■■■□□ 2.15
COA1-212ENST00000448704 PBRM1Q86U86 1689 aa28.46■■■□□ 2.15
COA1-212ENST00000448704 GRIN2BQ13224 1484 aa28.44■■■□□ 2.14
COA1-212ENST00000448704 RANGAP1P46060 587 aaPredicted RBP28.4■■■□□ 2.14
COA1-212ENST00000448704 EIF4G3O43432 1585 aaKnown RBP28.37■■■□□ 2.13
COA1-212ENST00000448704 FHAD1B1AJZ9 1412 aa28.36■■■□□ 2.13
COA1-212ENST00000448704 ADAMTS12P58397 1594 aa28.34■■■□□ 2.13
COA1-212ENST00000448704 VPS8Q8N3P4 1428 aa28.29■■■□□ 2.12
COA1-212ENST00000448704 ARAP1Q96P48 1450 aa28.28■■■□□ 2.12
COA1-212ENST00000448704 ARHGAP35Q9NRY4 1499 aa28.26■■■□□ 2.12
COA1-212ENST00000448704 SNAPC4Q5SXM2 1469 aa28.25■■■□□ 2.11
COA1-212ENST00000448704 CTTNBP2Q8WZ74 1663 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms