RNA–Protein interactions for RNA: ENST00000638154.2

TCF4-290, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 7,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-290ENST00000638154 MYT1Q01538 1121 aa9.75□□□□□ -0.85
TCF4-290ENST00000638154 PELP1Q8IZL8 1130 aaKnown RBP9.59□□□□□ -0.87
TCF4-290ENST00000638154 TTBK1Q5TCY1 1321 aaPredicted RBP9.22□□□□□ -0.93
TCF4-290ENST00000638154 ERICH6Q7L0X2 663 aa9.13□□□□□ -0.95
TCF4-290ENST00000638154 SLC24A1O60721 1099 aa8.89□□□□□ -0.99
TCF4-290ENST00000638154 RANGAP1P46060 587 aaPredicted RBP8.74□□□□□ -1.01
TCF4-290ENST00000638154 CENPBP07199 599 aaPredicted RBP8.59□□□□□ -1.03
TCF4-290ENST00000638154 CCER1Q8TC90 406 aaPredicted RBP8.51□□□□□ -1.05
TCF4-290ENST00000638154 EHMT2Q96KQ7 1210 aa8.48□□□□□ -1.05
TCF4-290ENST00000638154 EIF5BO60841 1220 aaKnown RBP8.46□□□□□ -1.05
TCF4-290ENST00000638154 YTHDC1Q96MU7 727 aaKnown RBP8.45□□□□□ -1.06
TCF4-290ENST00000638154 GLIPR1L2Q4G1C9 344 aa8.37□□□□□ -1.07
TCF4-290ENST00000638154 BCL11AQ9H165 835 aa8.3□□□□□ -1.08
TCF4-290ENST00000638154 PRKCSHP14314 528 aaPredicted RBP8.28□□□□□ -1.08
TCF4-290ENST00000638154 POLR3GLQ9BT43 218 aa8.23□□□□□ -1.09
TCF4-290ENST00000638154 DAXXQ9UER7 740 aaPredicted RBP8.18□□□□□ -1.1
TCF4-290ENST00000638154 NEFLP07196 543 aa8.16□□□□□ -1.1
TCF4-290ENST00000638154 RTL5Q5HYW3 569 aaPredicted RBP8.14□□□□□ -1.11
TCF4-290ENST00000638154 FAM9AQ8IZU1 332 aaPredicted RBP8.11□□□□□ -1.11
TCF4-290ENST00000638154 PODXL2Q9NZ53 605 aa8.1□□□□□ -1.11
TCF4-290ENST00000638154 PCGF6Q9BYE7 350 aa8.05□□□□□ -1.12
TCF4-290ENST00000638154 DCAF8L2P0C7V8 631 aa8.03□□□□□ -1.12
TCF4-290ENST00000638154 MYT1LQ9UL68 1186 aa8.02□□□□□ -1.12
TCF4-290ENST00000638154 CLSPNQ9HAW4 1339 aa8.02□□□□□ -1.13
TCF4-290ENST00000638154 GTF3C3Q9Y5Q9 886 aa7.98□□□□□ -1.13
TCF4-290ENST00000638154 ZEB1P37275 1124 aaPredicted RBP7.98□□□□□ -1.13
TCF4-290ENST00000638154 HRCP23327 699 aa7.96□□□□□ -1.14
TCF4-290ENST00000638154 HAP1P54257 671 aaPredicted RBP7.93□□□□□ -1.14
TCF4-290ENST00000638154 A0A0U1RQG5 324 aaPredicted RBP7.89□□□□□ -1.15
TCF4-290ENST00000638154 ZNF316A6NFI3 1004 aaPredicted RBP7.88□□□□□ -1.15
TCF4-290ENST00000638154 ZNF326Q5BKZ1 582 aaKnown RBP7.87□□□□□ -1.15
TCF4-290ENST00000638154 ANP32EQ9BTT0 268 aa7.87□□□□□ -1.15
TCF4-290ENST00000638154 PKNOX2Q96KN3 472 aa7.85□□□□□ -1.15
TCF4-290ENST00000638154 AMER1Q5JTC6 1135 aaPredicted RBP7.85□□□□□ -1.15
TCF4-290ENST00000638154 APLP2Q06481 763 aa7.84□□□□□ -1.15
TCF4-290ENST00000638154 CDK11BP21127 795 aaKnown RBP7.83□□□□□ -1.16
TCF4-290ENST00000638154 PPARGC1BQ86YN6 1023 aaKnown RBP7.83□□□□□ -1.16
TCF4-290ENST00000638154 C14orf37Q86TY3 774 aa7.81□□□□□ -1.16
TCF4-290ENST00000638154 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.81□□□□□ -1.16
TCF4-290ENST00000638154 CDK11AQ9UQ88 783 aaPredicted RBP7.79□□□□□ -1.16
TCF4-290ENST00000638154 SCAF1Q9H7N4 1312 aaKnown RBP7.79□□□□□ -1.16
TCF4-290ENST00000638154 TULP1O00294 542 aaPredicted RBP7.79□□□□□ -1.16
TCF4-290ENST00000638154 RTN4Q9NQC3 1192 aaKnown RBP7.79□□□□□ -1.16
TCF4-290ENST00000638154 TNNT2P45379 298 aaPredicted RBP7.78□□□□□ -1.16
TCF4-290ENST00000638154 CCDC136Q96JN2 1154 aa7.77□□□□□ -1.17
TCF4-290ENST00000638154 PDE4CQ08493 712 aa7.76□□□□□ -1.17
TCF4-290ENST00000638154 ACIN1Q9UKV3 1341 aaKnown RBP7.76□□□□□ -1.17
TCF4-290ENST00000638154 HOMEZQ8IX15 550 aa7.75□□□□□ -1.17
TCF4-290ENST00000638154 PLEKHG5O94827 1062 aa7.74□□□□□ -1.17
TCF4-290ENST00000638154 NBR1Q14596 966 aa7.71□□□□□ -1.17
TCF4-290ENST00000638154 NPM2Q86SE8 214 aaKnown RBP7.71□□□□□ -1.18
TCF4-290ENST00000638154 NCLP19338 710 aaKnown RBP7.71□□□□□ -1.18
TCF4-290ENST00000638154 BCANQ96GW7 911 aa7.68□□□□□ -1.18
TCF4-290ENST00000638154 VSIG10Q8N0Z9 540 aa7.68□□□□□ -1.18
TCF4-290ENST00000638154 NAP1L5Q96NT1 182 aaPredicted RBP7.67□□□□□ -1.18
TCF4-290ENST00000638154 PLPPR3Q6T4P5 718 aa7.66□□□□□ -1.18
TCF4-290ENST00000638154 DEKP35659 375 aaKnown RBP7.65□□□□□ -1.18
TCF4-290ENST00000638154 PDIA4P13667 645 aaKnown RBP7.62□□□□□ -1.19
TCF4-290ENST00000638154 APPP05067 770 aa7.62□□□□□ -1.19
TCF4-290ENST00000638154 NCBP3Q53F19 620 aaKnown RBP7.62□□□□□ -1.19
TCF4-290ENST00000638154 ANO8Q9HCE9 1232 aaPredicted RBP7.61□□□□□ -1.19
TCF4-290ENST00000638154 PTMSP20962 102 aa7.61□□□□□ -1.19
TCF4-290ENST00000638154 CNGB1Q14028 1251 aaPredicted RBP7.6□□□□□ -1.19
TCF4-290ENST00000638154 CSRNP3Q8WYN3 585 aa7.6□□□□□ -1.19
TCF4-290ENST00000638154 TPRNQ4KMQ1 711 aa7.59□□□□□ -1.19
TCF4-290ENST00000638154 ZNF526Q8TF50 670 aaPredicted RBP7.59□□□□□ -1.19
TCF4-290ENST00000638154 DIEXFQ68CQ4 756 aaKnown RBP7.58□□□□□ -1.2
TCF4-290ENST00000638154 TRIM44Q96DX7 344 aaPredicted RBP7.58□□□□□ -1.2
TCF4-290ENST00000638154 ARXQ96QS3 562 aa7.57□□□□□ -1.2
TCF4-290ENST00000638154 ANP32AP39687 249 aaKnown RBP7.56□□□□□ -1.2
TCF4-290ENST00000638154 ARID3AQ99856 593 aa7.53□□□□□ -1.2
TCF4-290ENST00000638154 HSP90AA1P07900 732 aaKnown RBP7.52□□□□□ -1.2
TCF4-290ENST00000638154 ERICH6BQ5W0A0 696 aa7.52□□□□□ -1.21
TCF4-290ENST00000638154 ARID4BQ4LE39 1312 aaPredicted RBP7.52□□□□□ -1.21
TCF4-290ENST00000638154 TAF7LQ5H9L4 462 aa7.52□□□□□ -1.21
TCF4-290ENST00000638154 UBE2Q2Q8WVN8 375 aa7.52□□□□□ -1.21
TCF4-290ENST00000638154 CALRP27797 417 aaKnown RBP7.52□□□□□ -1.21
TCF4-290ENST00000638154 PATL2C9JE40 543 aaKnown RBP7.51□□□□□ -1.21
TCF4-290ENST00000638154 KLHL34Q8N239 644 aa7.5□□□□□ -1.21
TCF4-290ENST00000638154 NEUROD1Q13562 356 aa7.5□□□□□ -1.21
TCF4-290ENST00000638154 SUPT5HO00267 1087 aaKnown RBP7.5□□□□□ -1.21
TCF4-290ENST00000638154 TIMELESSQ9UNS1 1208 aa7.5□□□□□ -1.21
TCF4-290ENST00000638154 ANP32BQ92688 251 aaKnown RBP7.49□□□□□ -1.21
TCF4-290ENST00000638154 HSP90AA2PQ14568 343 aaPredicted RBP7.47□□□□□ -1.21
TCF4-290ENST00000638154 CANXP27824 592 aaKnown RBP7.46□□□□□ -1.21
TCF4-290ENST00000638154 PAXIP1Q6ZW49 1069 aaPredicted RBP7.46□□□□□ -1.21
TCF4-290ENST00000638154 TNNT3P45378 269 aaPredicted RBP7.45□□□□□ -1.22
TCF4-290ENST00000638154 NEFMP07197 916 aa7.44□□□□□ -1.22
TCF4-290ENST00000638154 ZBTB47Q9UFB7 747 aaPredicted RBP7.43□□□□□ -1.22
TCF4-290ENST00000638154 USP35Q9P2H5 1018 aa7.43□□□□□ -1.22
TCF4-290ENST00000638154 CCDC9Q9Y3X0 531 aaKnown RBP7.43□□□□□ -1.22
TCF4-290ENST00000638154 HMGB1P09429 215 aaKnown RBP7.42□□□□□ -1.22
TCF4-290ENST00000638154 DNTTIP2Q5QJE6 756 aaKnown RBP7.42□□□□□ -1.22
TCF4-290ENST00000638154 SALL2Q9Y467 1007 aaPredicted RBP7.42□□□□□ -1.22
TCF4-290ENST00000638154 RSPH6AQ9H0K4 717 aa7.41□□□□□ -1.22
TCF4-290ENST00000638154 TRIM26Q12899 539 aaPredicted RBP7.39□□□□□ -1.23
TCF4-290ENST00000638154 DHX37Q8IY37 1157 aaKnown RBP7.39□□□□□ -1.23
TCF4-290ENST00000638154 BCL11BQ9C0K0 894 aaPredicted RBP7.39□□□□□ -1.23
TCF4-290ENST00000638154 CFAP44Q96MT7 982 aa7.38□□□□□ -1.23
TCF4-290ENST00000638154 HSP90B1P14625 803 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms