RNA–Protein interactions for RNA: ENST00000256497.8

EDEM1-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDEM1, Length 6,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-201ENST00000256497 DCAF8L2P0C7V8 631 aa31.15■■■□□ 2.58
EDEM1-201ENST00000256497 PELP1Q8IZL8 1130 aaKnown RBP29.66■■■□□ 2.34
EDEM1-201ENST00000256497 SUPT5HO00267 1087 aaKnown RBP29.28■■■□□ 2.28
EDEM1-201ENST00000256497 NISCHQ9Y2I1 1504 aa29.19■■■□□ 2.26
EDEM1-201ENST00000256497 SHROOM4Q9ULL8 1493 aa28.93■■■□□ 2.22
EDEM1-201ENST00000256497 EHMT2Q96KQ7 1210 aa28.77■■■□□ 2.2
EDEM1-201ENST00000256497 MYT1Q01538 1121 aa28.71■■■□□ 2.19
EDEM1-201ENST00000256497 ERICH6Q7L0X2 663 aa28.67■■■□□ 2.18
EDEM1-201ENST00000256497 CENPBP07199 599 aaPredicted RBP28.47■■■□□ 2.15
EDEM1-201ENST00000256497 PCGF6Q9BYE7 350 aa28.45■■■□□ 2.14
EDEM1-201ENST00000256497 CCER1Q8TC90 406 aaPredicted RBP28.26■■■□□ 2.11
EDEM1-201ENST00000256497 APLP2Q06481 763 aa27.99■■■□□ 2.07
EDEM1-201ENST00000256497 TTBK1Q5TCY1 1321 aaPredicted RBP27.99■■■□□ 2.07
EDEM1-201ENST00000256497 ZEB1P37275 1124 aaPredicted RBP27.95■■■□□ 2.07
EDEM1-201ENST00000256497 YTHDC1Q96MU7 727 aaKnown RBP27.85■■■□□ 2.05
EDEM1-201ENST00000256497 FAM9AQ8IZU1 332 aaPredicted RBP27.75■■■□□ 2.03
EDEM1-201ENST00000256497 NEFLP07196 543 aa27.67■■■□□ 2.02
EDEM1-201ENST00000256497 RANGAP1P46060 587 aaPredicted RBP27.39■■□□□ 1.98
EDEM1-201ENST00000256497 HRCP23327 699 aa27.18■■□□□ 1.94
EDEM1-201ENST00000256497 ATP1B4Q9UN42 357 aaPredicted RBP27.03■■□□□ 1.92
EDEM1-201ENST00000256497 DAXXQ9UER7 740 aaPredicted RBP27■■□□□ 1.91
EDEM1-201ENST00000256497 TRIM41Q8WV44 630 aa26.93■■□□□ 1.9
EDEM1-201ENST00000256497 PPARGC1BQ86YN6 1023 aaKnown RBP26.86■■□□□ 1.89
EDEM1-201ENST00000256497 TRIM26Q12899 539 aaPredicted RBP26.85■■□□□ 1.89
EDEM1-201ENST00000256497 RTL5Q5HYW3 569 aaPredicted RBP26.73■■□□□ 1.87
EDEM1-201ENST00000256497 UBTFP17480 764 aaKnown RBP26.71■■□□□ 1.87
EDEM1-201ENST00000256497 ZNF316A6NFI3 1004 aaPredicted RBP26.42■■□□□ 1.82
EDEM1-201ENST00000256497 GTF3C3Q9Y5Q9 886 aa26.41■■□□□ 1.82
EDEM1-201ENST00000256497 DIEXFQ68CQ4 756 aaKnown RBP26.4■■□□□ 1.82
EDEM1-201ENST00000256497 POLR3GLQ9BT43 218 aa26.34■■□□□ 1.81
EDEM1-201ENST00000256497 BCANQ96GW7 911 aa26.26■■□□□ 1.79
EDEM1-201ENST00000256497 CNGB1Q14028 1251 aaPredicted RBP26.25■■□□□ 1.79
EDEM1-201ENST00000256497 ITGAEP38570 1179 aa26.18■■□□□ 1.78
EDEM1-201ENST00000256497 LOC105371045A0A1W2PR82 267 aa26.14■■□□□ 1.77
EDEM1-201ENST00000256497 HNRNPUL2Q1KMD3 747 aaKnown RBP26.13■■□□□ 1.77
EDEM1-201ENST00000256497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.12■■□□□ 1.77
EDEM1-201ENST00000256497 CLSPNQ9HAW4 1339 aa26.12■■□□□ 1.77
EDEM1-201ENST00000256497 MYT1LQ9UL68 1186 aa26.02■■□□□ 1.76
EDEM1-201ENST00000256497 CDK11AQ9UQ88 783 aaPredicted RBP25.96■■□□□ 1.75
EDEM1-201ENST00000256497 EIF5BO60841 1220 aaKnown RBP25.9■■□□□ 1.74
EDEM1-201ENST00000256497 ACIN1Q9UKV3 1341 aaKnown RBP25.87■■□□□ 1.73
EDEM1-201ENST00000256497 PABPN1Q86U42 306 aaKnown RBP eCLIP25.81■■□□□ 1.72
EDEM1-201ENST00000256497 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
EDEM1-201ENST00000256497 ABCC9O60706 1549 aa25.75■■□□□ 1.71
EDEM1-201ENST00000256497 ANP32AP39687 249 aaKnown RBP25.58■■□□□ 1.69
EDEM1-201ENST00000256497 SLC4A1APQ9BWU0 796 aaKnown RBP25.56■■□□□ 1.68
EDEM1-201ENST00000256497 GLIPR1L2Q4G1C9 344 aa25.54■■□□□ 1.68
EDEM1-201ENST00000256497 ANP32CO43423 234 aa25.53■■□□□ 1.68
EDEM1-201ENST00000256497 NPM2Q86SE8 214 aaKnown RBP25.48■■□□□ 1.67
EDEM1-201ENST00000256497 NEUROD1Q13562 356 aa25.45■■□□□ 1.66
EDEM1-201ENST00000256497 FKBP8Q14318 412 aa25.31■■□□□ 1.64
EDEM1-201ENST00000256497 NBR1Q14596 966 aa25.28■■□□□ 1.64
EDEM1-201ENST00000256497 FAM50AQ14320 339 aaKnown RBP25.28■■□□□ 1.64
EDEM1-201ENST00000256497 ZBTB47Q9UFB7 747 aaPredicted RBP25.24■■□□□ 1.63
EDEM1-201ENST00000256497 SCAF1Q9H7N4 1312 aaKnown RBP25.23■■□□□ 1.63
EDEM1-201ENST00000256497 BCL11AQ9H165 835 aa25.23■■□□□ 1.63
EDEM1-201ENST00000256497 FBLN2P98095 1184 aa25.22■■□□□ 1.63
EDEM1-201ENST00000256497 CANXP27824 592 aaKnown RBP25.19■■□□□ 1.62
EDEM1-201ENST00000256497 TRIM52Q96A61 297 aa25.19■■□□□ 1.62
EDEM1-201ENST00000256497 ANP32BQ92688 251 aaKnown RBP25.18■■□□□ 1.62
EDEM1-201ENST00000256497 ZNF326Q5BKZ1 582 aaKnown RBP25.08■■□□□ 1.61
EDEM1-201ENST00000256497 ARXQ96QS3 562 aa25.01■■□□□ 1.59
EDEM1-201ENST00000256497 ARID3CA6NKF2 412 aa25■■□□□ 1.59
EDEM1-201ENST00000256497 P3H3Q8IVL6 736 aa24.92■■□□□ 1.58
EDEM1-201ENST00000256497 HSP90AA1P07900 732 aaKnown RBP24.92■■□□□ 1.58
EDEM1-201ENST00000256497 ANP32EQ9BTT0 268 aa24.87■■□□□ 1.57
EDEM1-201ENST00000256497 HNRNPUQ00839 825 aaKnown RBP eCLIP24.84■■□□□ 1.57
EDEM1-201ENST00000256497 UPF2Q9HAU5 1272 aaKnown RBP24.8■■□□□ 1.56
EDEM1-201ENST00000256497 CCDC136Q96JN2 1154 aa24.74■■□□□ 1.55
EDEM1-201ENST00000256497 SLC24A1O60721 1099 aa24.73■■□□□ 1.55
EDEM1-201ENST00000256497 FAM9BQ8IZU0 186 aa24.69■■□□□ 1.54
EDEM1-201ENST00000256497 IRX6P78412 446 aaPredicted RBP24.67■■□□□ 1.54
EDEM1-201ENST00000256497 RTN4Q9NQC3 1192 aaKnown RBP24.65■■□□□ 1.54
EDEM1-201ENST00000256497 DDX10Q13206 875 aaKnown RBP24.65■■□□□ 1.54
EDEM1-201ENST00000256497 ZNF777Q9ULD5 760 aaPredicted RBP24.62■■□□□ 1.53
EDEM1-201ENST00000256497 NEFMP07197 916 aa24.6■■□□□ 1.53
EDEM1-201ENST00000256497 MIER1Q8N108 512 aa24.58■■□□□ 1.53
EDEM1-201ENST00000256497 SALL2Q9Y467 1007 aaPredicted RBP24.57■■□□□ 1.52
EDEM1-201ENST00000256497 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
EDEM1-201ENST00000256497 TRIM44Q96DX7 344 aaPredicted RBP24.52■■□□□ 1.52
EDEM1-201ENST00000256497 TNNT2P45379 298 aaPredicted RBP24.51■■□□□ 1.51
EDEM1-201ENST00000256497 CSRNP3Q8WYN3 585 aa24.5■■□□□ 1.51
EDEM1-201ENST00000256497 PLPPR3Q6T4P5 718 aa24.47■■□□□ 1.51
EDEM1-201ENST00000256497 NAP1L5Q96NT1 182 aaPredicted RBP24.44■■□□□ 1.5
EDEM1-201ENST00000256497 DDRGK1Q96HY6 314 aa24.42■■□□□ 1.5
EDEM1-201ENST00000256497 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.39■■□□□ 1.5
EDEM1-201ENST00000256497 TONSLQ96HA7 1378 aa24.39■■□□□ 1.49
EDEM1-201ENST00000256497 ERICH6BQ5W0A0 696 aa24.37■■□□□ 1.49
EDEM1-201ENST00000256497 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
EDEM1-201ENST00000256497 MRS2Q9HD23 443 aa24.31■■□□□ 1.48
EDEM1-201ENST00000256497 TMC1Q8TDI8 760 aa24.3■■□□□ 1.48
EDEM1-201ENST00000256497 BECN1Q14457 450 aa24.29■■□□□ 1.48
EDEM1-201ENST00000256497 LAS1LQ9Y4W2 734 aaKnown RBP24.28■■□□□ 1.48
EDEM1-201ENST00000256497 CHGAP10645 457 aaKnown RBP24.25■■□□□ 1.47
EDEM1-201ENST00000256497 PPM1GO15355 546 aaPredicted RBP24.23■■□□□ 1.47
EDEM1-201ENST00000256497 NOP58Q9Y2X3 529 aaKnown RBP24.21■■□□□ 1.47
EDEM1-201ENST00000256497 DNTTIP2Q5QJE6 756 aaKnown RBP24.21■■□□□ 1.47
EDEM1-201ENST00000256497 ESF1Q9H501 851 aaKnown RBP24.21■■□□□ 1.47
EDEM1-201ENST00000256497 CDK11BP21127 795 aaKnown RBP24.2■■□□□ 1.46
EDEM1-201ENST00000256497 PTMAP06454 111 aaKnown RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms