RNA–Protein interactions for RNA: ENST00000569551.6

ITFG1-212, Transcript of integrin alpha FG-GAP repeat containing 1, humanhuman

TSL 5

Gene ITFG1, Length 559 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITFG1-212ENST00000569551 AEBP2Q6ZN18 517 aaPredicted RBP25.17■■□□□ 1.62
ITFG1-212ENST00000569551 CHIC1Q5VXU3 224 aa24.6■■□□□ 1.53
ITFG1-212ENST00000569551 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
ITFG1-212ENST00000569551 SENP3Q9H4L4 574 aaPredicted RBP21.27■■□□□ 1
ITFG1-212ENST00000569551 PLPPR3Q6T4P5 718 aa19.96■□□□□ 0.79
ITFG1-212ENST00000569551 FOXD1Q16676 465 aa19.94■□□□□ 0.78
ITFG1-212ENST00000569551 PPP6R1Q9UPN7 881 aa19.08■□□□□ 0.64
ITFG1-212ENST00000569551 ADRA2BP18089 450 aa19.04■□□□□ 0.64
ITFG1-212ENST00000569551 PIAS4Q8N2W9 510 aaPredicted RBP18.63■□□□□ 0.57
ITFG1-212ENST00000569551 MSH5O43196 834 aa18.48■□□□□ 0.55
ITFG1-212ENST00000569551 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
ITFG1-212ENST00000569551 PPP4R3CPQ6ZMV5 832 aa17.6■□□□□ 0.41
ITFG1-212ENST00000569551 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
ITFG1-212ENST00000569551 KCNA4P22459 653 aa17.31■□□□□ 0.36
ITFG1-212ENST00000569551 MAPK8IP2Q13387 824 aaPredicted RBP17.25■□□□□ 0.35
ITFG1-212ENST00000569551 NCBP3Q53F19 620 aaKnown RBP17.1■□□□□ 0.33
ITFG1-212ENST00000569551 CNKSR2Q8WXI2 1034 aa17.09■□□□□ 0.33
ITFG1-212ENST00000569551 DMRT2Q9Y5R5 561 aa17.02■□□□□ 0.32
ITFG1-212ENST00000569551 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
ITFG1-212ENST00000569551 RNF216Q9NWF9 866 aaPredicted RBP16.76■□□□□ 0.27
ITFG1-212ENST00000569551 HOXD11P31277 338 aaPredicted RBP16.71■□□□□ 0.27
ITFG1-212ENST00000569551 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
ITFG1-212ENST00000569551 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
ITFG1-212ENST00000569551 DCAF8L1A6NGE4 600 aa16.23■□□□□ 0.19
ITFG1-212ENST00000569551 EHMT2Q96KQ7 1210 aa16.06■□□□□ 0.16
ITFG1-212ENST00000569551 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
ITFG1-212ENST00000569551 ZBTB22O15209 634 aa15.99■□□□□ 0.15
ITFG1-212ENST00000569551 CACNB1Q02641 598 aaPredicted RBP15.94■□□□□ 0.14
ITFG1-212ENST00000569551 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
ITFG1-212ENST00000569551 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
ITFG1-212ENST00000569551 RNF39Q9H2S5 420 aa15.87■□□□□ 0.13
ITFG1-212ENST00000569551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.12
ITFG1-212ENST00000569551 U3KPZ7 1027 aaPredicted RBP15.68■□□□□ 0.1
ITFG1-212ENST00000569551 MYCNP04198 464 aaPredicted RBP15.63■□□□□ 0.09
ITFG1-212ENST00000569551 C1QBPQ07021 282 aaKnown RBP15.54■□□□□ 0.08
ITFG1-212ENST00000569551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.4■□□□□ 0.06
ITFG1-212ENST00000569551 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
ITFG1-212ENST00000569551 SAMD1Q6SPF0 538 aaPredicted RBP15.37■□□□□ 0.05
ITFG1-212ENST00000569551 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
ITFG1-212ENST00000569551 ATF5Q9Y2D1 282 aaPredicted RBP15.26■□□□□ 0.03
ITFG1-212ENST00000569551 APLP2Q06481 763 aa15.2■□□□□ 0.02
ITFG1-212ENST00000569551 SPINK5Q9NQ38 1064 aaPredicted RBP15.2■□□□□ 0.02
ITFG1-212ENST00000569551 CAPN15O75808 1086 aa15.07■□□□□ 0
ITFG1-212ENST00000569551 ZNF219Q9P2Y4 722 aaPredicted RBP15.04■□□□□ -0
ITFG1-212ENST00000569551 TRHP20396 242 aaPredicted RBP15.01□□□□□ -0.01
ITFG1-212ENST00000569551 DSG3P32926 999 aa14.88□□□□□ -0.03
ITFG1-212ENST00000569551 ABCB7O75027 752 aa14.83□□□□□ -0.04
ITFG1-212ENST00000569551 POLA2Q14181 598 aa14.8□□□□□ -0.04
ITFG1-212ENST00000569551 MKRN4PQ13434 485 aaPredicted RBP14.61□□□□□ -0.07
ITFG1-212ENST00000569551 ZBTB12Q9Y330 459 aaPredicted RBP14.56□□□□□ -0.08
ITFG1-212ENST00000569551 FBLN2P98095 1184 aa14.5□□□□□ -0.09
ITFG1-212ENST00000569551 OSCARQ8IYS5 282 aa14.36□□□□□ -0.11
ITFG1-212ENST00000569551 FKBP8Q14318 412 aa14.31□□□□□ -0.12
ITFG1-212ENST00000569551 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
ITFG1-212ENST00000569551 POTEHQ6S545 545 aa14.21□□□□□ -0.13
ITFG1-212ENST00000569551 SPDYE2BA6NHP3 402 aa14.19□□□□□ -0.14
ITFG1-212ENST00000569551 SPDYE6P0CI01 402 aa14.19□□□□□ -0.14
ITFG1-212ENST00000569551 SPDYE2Q495Y8 402 aa14.19□□□□□ -0.14
ITFG1-212ENST00000569551 SSUH2Q9Y2M2 353 aa14.15□□□□□ -0.14
ITFG1-212ENST00000569551 PROM2Q8N271 834 aa14.11□□□□□ -0.15
ITFG1-212ENST00000569551 RBM42Q9BTD8 480 aaKnown RBP14.11□□□□□ -0.15
ITFG1-212ENST00000569551 ZNF692Q9BU19 519 aaPredicted RBP14.1□□□□□ -0.15
ITFG1-212ENST00000569551 AKT1S1Q96B36 256 aa13.97□□□□□ -0.17
ITFG1-212ENST00000569551 PABPN1Q86U42 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
ITFG1-212ENST00000569551 CHRDL2Q6WN34 429 aa13.85□□□□□ -0.19
ITFG1-212ENST00000569551 REM2Q8IYK8 340 aaPredicted RBP13.84□□□□□ -0.19
ITFG1-212ENST00000569551 SPDYE1Q8NFV5 336 aaPredicted RBP13.73□□□□□ -0.21
ITFG1-212ENST00000569551 FBXO3Q9UK99 471 aa13.73□□□□□ -0.21
ITFG1-212ENST00000569551 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
ITFG1-212ENST00000569551 STAG3Q9UJ98 1225 aa13.68□□□□□ -0.22
ITFG1-212ENST00000569551 VASPP50552 380 aaPredicted RBP13.63□□□□□ -0.23
ITFG1-212ENST00000569551 CLEC11AQ9Y240 323 aa13.63□□□□□ -0.23
ITFG1-212ENST00000569551 PIP4P2Q8N4L2 257 aa13.57□□□□□ -0.24
ITFG1-212ENST00000569551 PRR29P0C7W0 189 aa13.52□□□□□ -0.25
ITFG1-212ENST00000569551 FXR2P51116 673 aaKnown RBP eCLIP13.46□□□□□ -0.25
ITFG1-212ENST00000569551 CREBZFQ9NS37 354 aa13.46□□□□□ -0.25
ITFG1-212ENST00000569551 IFNLR1Q8IU57 520 aaPredicted RBP13.45□□□□□ -0.26
ITFG1-212ENST00000569551 MIER1Q8N108 512 aa13.42□□□□□ -0.26
ITFG1-212ENST00000569551 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
ITFG1-212ENST00000569551 MNX1P50219 401 aaPredicted RBP13.36□□□□□ -0.27
ITFG1-212ENST00000569551 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
ITFG1-212ENST00000569551 PRKAR2AP13861 404 aaKnown RBP13.33□□□□□ -0.28
ITFG1-212ENST00000569551 PLEKHG5O94827 1062 aa13.31□□□□□ -0.28
ITFG1-212ENST00000569551 SP7Q8TDD2 431 aaPredicted RBP13.3□□□□□ -0.28
ITFG1-212ENST00000569551 HAX1O00165 279 aa13.29□□□□□ -0.28
ITFG1-212ENST00000569551 EVX2Q03828 476 aa13.28□□□□□ -0.28
ITFG1-212ENST00000569551 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.29
ITFG1-212ENST00000569551 KLHL34Q8N239 644 aa13.26□□□□□ -0.29
ITFG1-212ENST00000569551 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
ITFG1-212ENST00000569551 FARP1Q9Y4F1 1045 aaPredicted RBP13.23□□□□□ -0.29
ITFG1-212ENST00000569551 NUBP1P53384 320 aa13.18□□□□□ -0.3
ITFG1-212ENST00000569551 RTN4Q9NQC3 1192 aaKnown RBP13.16□□□□□ -0.3
ITFG1-212ENST00000569551 AMER1Q5JTC6 1135 aaPredicted RBP13.15□□□□□ -0.3
ITFG1-212ENST00000569551 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
ITFG1-212ENST00000569551 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
ITFG1-212ENST00000569551 PKD2Q13563 968 aa13.04□□□□□ -0.32
ITFG1-212ENST00000569551 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
ITFG1-212ENST00000569551 FAM212AQ96EL1 285 aa13.02□□□□□ -0.33
ITFG1-212ENST00000569551 GSE1Q14687 1217 aa12.98□□□□□ -0.33
ITFG1-212ENST00000569551 CIZ1Q9ULV3 898 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms