RNA–Protein interactions for RNA: ENST00000629387.2

TCF4-268, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-268ENST00000629387 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
TCF4-268ENST00000629387 MYT1Q01538 1121 aa10.98□□□□□ -0.65
TCF4-268ENST00000629387 CHIC1Q5VXU3 224 aa10.92□□□□□ -0.66
TCF4-268ENST00000629387 PELP1Q8IZL8 1130 aaKnown RBP10.92□□□□□ -0.66
TCF4-268ENST00000629387 AEBP2Q6ZN18 517 aaPredicted RBP10.8□□□□□ -0.68
TCF4-268ENST00000629387 EHMT2Q96KQ7 1210 aa10.64□□□□□ -0.71
TCF4-268ENST00000629387 TTBK1Q5TCY1 1321 aaPredicted RBP10.62□□□□□ -0.71
TCF4-268ENST00000629387 PRKCSHP14314 528 aaPredicted RBP10.56□□□□□ -0.72
TCF4-268ENST00000629387 ERICH6Q7L0X2 663 aa10.53□□□□□ -0.72
TCF4-268ENST00000629387 DAXXQ9UER7 740 aaPredicted RBP10.37□□□□□ -0.75
TCF4-268ENST00000629387 APLP2Q06481 763 aa10.23□□□□□ -0.77
TCF4-268ENST00000629387 PLPPR3Q6T4P5 718 aa10.1□□□□□ -0.79
TCF4-268ENST00000629387 PHF23Q9BUL5 403 aaPredicted RBP10.09□□□□□ -0.79
TCF4-268ENST00000629387 EIF5BO60841 1220 aaKnown RBP10.02□□□□□ -0.81
TCF4-268ENST00000629387 BCL11AQ9H165 835 aa9.9□□□□□ -0.82
TCF4-268ENST00000629387 RTN4Q9NQC3 1192 aaKnown RBP9.9□□□□□ -0.82
TCF4-268ENST00000629387 NCBP3Q53F19 620 aaKnown RBP9.84□□□□□ -0.83
TCF4-268ENST00000629387 RANGAP1P46060 587 aaPredicted RBP9.83□□□□□ -0.84
TCF4-268ENST00000629387 PLEKHG5O94827 1062 aa9.72□□□□□ -0.85
TCF4-268ENST00000629387 KCNA4P22459 653 aa9.68□□□□□ -0.86
TCF4-268ENST00000629387 FAM9AQ8IZU1 332 aaPredicted RBP9.65□□□□□ -0.86
TCF4-268ENST00000629387 TIMELESSQ9UNS1 1208 aa9.61□□□□□ -0.87
TCF4-268ENST00000629387 KLHL34Q8N239 644 aa9.6□□□□□ -0.87
TCF4-268ENST00000629387 TULP1O00294 542 aaPredicted RBP9.57□□□□□ -0.88
TCF4-268ENST00000629387 ARXQ96QS3 562 aa9.55□□□□□ -0.88
TCF4-268ENST00000629387 PODXL2Q9NZ53 605 aa9.55□□□□□ -0.88
TCF4-268ENST00000629387 NISCHQ9Y2I1 1504 aa9.52□□□□□ -0.89
TCF4-268ENST00000629387 CSRNP3Q8WYN3 585 aa9.51□□□□□ -0.89
TCF4-268ENST00000629387 AMER1Q5JTC6 1135 aaPredicted RBP9.41□□□□□ -0.9
TCF4-268ENST00000629387 ADRA2BP18089 450 aa9.4□□□□□ -0.91
TCF4-268ENST00000629387 HOMEZQ8IX15 550 aa9.39□□□□□ -0.91
TCF4-268ENST00000629387 CENPBP07199 599 aaPredicted RBP9.37□□□□□ -0.91
TCF4-268ENST00000629387 TPRNQ4KMQ1 711 aa9.24□□□□□ -0.93
TCF4-268ENST00000629387 C14orf37Q86TY3 774 aa9.24□□□□□ -0.93
TCF4-268ENST00000629387 PDIA4P13667 645 aaKnown RBP9.23□□□□□ -0.93
TCF4-268ENST00000629387 TAOK2Q9UL54 1235 aa9.23□□□□□ -0.93
TCF4-268ENST00000629387 NPM2Q86SE8 214 aaKnown RBP9.22□□□□□ -0.93
TCF4-268ENST00000629387 SCAF1Q9H7N4 1312 aaKnown RBP9.21□□□□□ -0.93
TCF4-268ENST00000629387 DCAF8L2P0C7V8 631 aa9.21□□□□□ -0.93
TCF4-268ENST00000629387 HAP1P54257 671 aaPredicted RBP9.2□□□□□ -0.94
TCF4-268ENST00000629387 PKNOX2Q96KN3 472 aa9.2□□□□□ -0.94
TCF4-268ENST00000629387 SENP3Q9H4L4 574 aaPredicted RBP9.19□□□□□ -0.94
TCF4-268ENST00000629387 PDE4CQ08493 712 aa9.19□□□□□ -0.94
TCF4-268ENST00000629387 UBE2Q2Q8WVN8 375 aa9.18□□□□□ -0.94
TCF4-268ENST00000629387 NEFLP07196 543 aa9.17□□□□□ -0.94
TCF4-268ENST00000629387 SLC4A1APQ9BWU0 796 aaKnown RBP9.14□□□□□ -0.95
TCF4-268ENST00000629387 ANO8Q9HCE9 1232 aaPredicted RBP9.13□□□□□ -0.95
TCF4-268ENST00000629387 DHX37Q8IY37 1157 aaKnown RBP9.04□□□□□ -0.96
TCF4-268ENST00000629387 BCANQ96GW7 911 aa9.03□□□□□ -0.96
TCF4-268ENST00000629387 GTF3C3Q9Y5Q9 886 aa9.03□□□□□ -0.96
TCF4-268ENST00000629387 HRCP23327 699 aa9.01□□□□□ -0.97
TCF4-268ENST00000629387 CHMP4AQ9BY43 222 aa9□□□□□ -0.97
TCF4-268ENST00000629387 ANP32EQ9BTT0 268 aa8.99□□□□□ -0.97
TCF4-268ENST00000629387 A0A0U1RQG5 324 aaPredicted RBP8.98□□□□□ -0.97
TCF4-268ENST00000629387 BCL11BQ9C0K0 894 aaPredicted RBP8.98□□□□□ -0.97
TCF4-268ENST00000629387 ZBTB22O15209 634 aa8.97□□□□□ -0.97
TCF4-268ENST00000629387 CCDC136Q96JN2 1154 aa8.96□□□□□ -0.97
TCF4-268ENST00000629387 DNAJC5Q9H3Z4 198 aa8.96□□□□□ -0.97
TCF4-268ENST00000629387 SUPT5HO00267 1087 aaKnown RBP8.96□□□□□ -0.98
TCF4-268ENST00000629387 LOC105371045A0A1W2PR82 267 aa8.94□□□□□ -0.98
TCF4-268ENST00000629387 POLR3GLQ9BT43 218 aa8.94□□□□□ -0.98
TCF4-268ENST00000629387 ZEB1P37275 1124 aaPredicted RBP8.92□□□□□ -0.98
TCF4-268ENST00000629387 TAF7LQ5H9L4 462 aa8.92□□□□□ -0.98
TCF4-268ENST00000629387 CDK11BP21127 795 aaKnown RBP8.9□□□□□ -0.98
TCF4-268ENST00000629387 CDK11AQ9UQ88 783 aaPredicted RBP8.9□□□□□ -0.98
TCF4-268ENST00000629387 TRIM26Q12899 539 aaPredicted RBP8.89□□□□□ -0.99
TCF4-268ENST00000629387 PPP6R1Q9UPN7 881 aa8.88□□□□□ -0.99
TCF4-268ENST00000629387 BRD2P25440 801 aaKnown RBP8.86□□□□□ -0.99
TCF4-268ENST00000629387 FGD1P98174 961 aa8.81□□□□□ -1
TCF4-268ENST00000629387 PPARGC1BQ86YN6 1023 aaKnown RBP8.8□□□□□ -1
TCF4-268ENST00000629387 FBXO3Q9UK99 471 aa8.8□□□□□ -1
TCF4-268ENST00000629387 PAXIP1Q6ZW49 1069 aaPredicted RBP8.8□□□□□ -1
TCF4-268ENST00000629387 SAMD1Q6SPF0 538 aaPredicted RBP8.79□□□□□ -1
TCF4-268ENST00000629387 SALL2Q9Y467 1007 aaPredicted RBP8.79□□□□□ -1
TCF4-268ENST00000629387 CFAP44Q96MT7 982 aa8.78□□□□□ -1
TCF4-268ENST00000629387 IRX6P78412 446 aaPredicted RBP8.77□□□□□ -1
TCF4-268ENST00000629387 CLSPNQ9HAW4 1339 aa8.77□□□□□ -1.01
TCF4-268ENST00000629387 GLIPR1L2Q4G1C9 344 aa8.76□□□□□ -1.01
TCF4-268ENST00000629387 UBTFP17480 764 aaKnown RBP8.74□□□□□ -1.01
TCF4-268ENST00000629387 SHROOM4Q9ULL8 1493 aa8.74□□□□□ -1.01
TCF4-268ENST00000629387 TMEM132AQ24JP5 1023 aa8.74□□□□□ -1.01
TCF4-268ENST00000629387 NAP1L5Q96NT1 182 aaPredicted RBP8.73□□□□□ -1.01
TCF4-268ENST00000629387 PLCB2Q00722 1185 aa8.73□□□□□ -1.01
TCF4-268ENST00000629387 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.72□□□□□ -1.01
TCF4-268ENST00000629387 FKBP8Q14318 412 aa8.72□□□□□ -1.01
TCF4-268ENST00000629387 DEKP35659 375 aaKnown RBP8.71□□□□□ -1.02
TCF4-268ENST00000629387 ACIN1Q9UKV3 1341 aaKnown RBP8.7□□□□□ -1.02
TCF4-268ENST00000629387 NPM3O75607 178 aaKnown RBP8.69□□□□□ -1.02
TCF4-268ENST00000629387 ZNF326Q5BKZ1 582 aaKnown RBP8.68□□□□□ -1.02
TCF4-268ENST00000629387 MYT1LQ9UL68 1186 aa8.68□□□□□ -1.02
TCF4-268ENST00000629387 HSP90B1P14625 803 aaKnown RBP8.64□□□□□ -1.03
TCF4-268ENST00000629387 RBM10P98175 930 aaKnown RBP8.64□□□□□ -1.03
TCF4-268ENST00000629387 CNKSR2Q8WXI2 1034 aa8.64□□□□□ -1.03
TCF4-268ENST00000629387 AAMPQ13685 434 aa8.63□□□□□ -1.03
TCF4-268ENST00000629387 DNAJC5BQ9UF47 199 aa8.61□□□□□ -1.03
TCF4-268ENST00000629387 VSIG10Q8N0Z9 540 aa8.58□□□□□ -1.04
TCF4-268ENST00000629387 ERICH6BQ5W0A0 696 aa8.58□□□□□ -1.04
TCF4-268ENST00000629387 CCDC9Q9Y3X0 531 aaKnown RBP8.58□□□□□ -1.04
TCF4-268ENST00000629387 IGSF3O75054 1194 aa8.57□□□□□ -1.04
TCF4-268ENST00000629387 NEUROD1Q13562 356 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms