RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-218ENST00000563686 NISCHQ9Y2I1 1504 aa10.88□□□□□ -0.67
TCF4-218ENST00000563686 DCAF8L2P0C7V8 631 aa9.7□□□□□ -0.86
TCF4-218ENST00000563686 SHROOM4Q9ULL8 1493 aa9.68□□□□□ -0.86
TCF4-218ENST00000563686 SUPT5HO00267 1087 aaKnown RBP9.59□□□□□ -0.87
TCF4-218ENST00000563686 CCDC180Q9P1Z9 1646 aa9.29□□□□□ -0.92
TCF4-218ENST00000563686 ZCCHC6Q5VYS8 1495 aaKnown RBP9.17□□□□□ -0.94
TCF4-218ENST00000563686 PCGF6Q9BYE7 350 aa9.06□□□□□ -0.96
TCF4-218ENST00000563686 CHIC1Q5VXU3 224 aa8.99□□□□□ -0.97
TCF4-218ENST00000563686 EHMT2Q96KQ7 1210 aa8.99□□□□□ -0.97
TCF4-218ENST00000563686 TRIM41Q8WV44 630 aa8.98□□□□□ -0.97
TCF4-218ENST00000563686 ZEB1P37275 1124 aaPredicted RBP8.96□□□□□ -0.98
TCF4-218ENST00000563686 FAM9AQ8IZU1 332 aaPredicted RBP8.93□□□□□ -0.98
TCF4-218ENST00000563686 HRCP23327 699 aa8.93□□□□□ -0.98
TCF4-218ENST00000563686 SCRIBQ14160 1630 aa8.89□□□□□ -0.99
TCF4-218ENST00000563686 TRIM26Q12899 539 aaPredicted RBP8.89□□□□□ -0.99
TCF4-218ENST00000563686 DCAF1Q9Y4B6 1507 aa8.84□□□□□ -0.99
TCF4-218ENST00000563686 LOC105371045A0A1W2PR82 267 aa8.81□□□□□ -1
TCF4-218ENST00000563686 APLP2Q06481 763 aa8.78□□□□□ -1
TCF4-218ENST00000563686 MYO15BQ96JP2 1530 aa8.78□□□□□ -1
TCF4-218ENST00000563686 ABCC9O60706 1549 aa8.77□□□□□ -1.01
TCF4-218ENST00000563686 CCER1Q8TC90 406 aaPredicted RBP8.73□□□□□ -1.01
TCF4-218ENST00000563686 TTBK1Q5TCY1 1321 aaPredicted RBP8.73□□□□□ -1.01
TCF4-218ENST00000563686 UBTFP17480 764 aaKnown RBP8.67□□□□□ -1.02
TCF4-218ENST00000563686 NACADO15069 1562 aa8.67□□□□□ -1.02
TCF4-218ENST00000563686 PPARGC1BQ86YN6 1023 aaKnown RBP8.67□□□□□ -1.02
TCF4-218ENST00000563686 RB1CC1Q8TDY2 1594 aa8.65□□□□□ -1.03
TCF4-218ENST00000563686 CENPBP07199 599 aaPredicted RBP8.64□□□□□ -1.03
TCF4-218ENST00000563686 PELP1Q8IZL8 1130 aaKnown RBP8.61□□□□□ -1.03
TCF4-218ENST00000563686 RSF1Q96T23 1441 aaPredicted RBP8.61□□□□□ -1.03
TCF4-218ENST00000563686 RANGAP1P46060 587 aaPredicted RBP8.58□□□□□ -1.04
TCF4-218ENST00000563686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.48□□□□□ -1.05
TCF4-218ENST00000563686 PABPN1Q86U42 306 aaKnown RBP eCLIP8.48□□□□□ -1.05
TCF4-218ENST00000563686 BAZ1AQ9NRL2 1556 aaPredicted RBP8.47□□□□□ -1.05
TCF4-218ENST00000563686 YTHDC1Q96MU7 727 aaKnown RBP8.45□□□□□ -1.06
TCF4-218ENST00000563686 WIZO95785 1651 aa8.43□□□□□ -1.06
TCF4-218ENST00000563686 DIEXFQ68CQ4 756 aaKnown RBP8.42□□□□□ -1.06
TCF4-218ENST00000563686 MROH2BQ7Z745 1585 aa8.42□□□□□ -1.06
TCF4-218ENST00000563686 ATP1B4Q9UN42 357 aaPredicted RBP8.41□□□□□ -1.06
TCF4-218ENST00000563686 HNRNPUL2Q1KMD3 747 aaKnown RBP8.41□□□□□ -1.06
TCF4-218ENST00000563686 TOP2AP11388 1531 aaKnown RBP8.4□□□□□ -1.06
TCF4-218ENST00000563686 CECR2Q9BXF3 1484 aa8.4□□□□□ -1.06
TCF4-218ENST00000563686 CSRNP3Q8WYN3 585 aa8.38□□□□□ -1.07
TCF4-218ENST00000563686 EEA1Q15075 1411 aa8.38□□□□□ -1.07
TCF4-218ENST00000563686 GOLGA3Q08378 1498 aa8.38□□□□□ -1.07
TCF4-218ENST00000563686 MYT1Q01538 1121 aa8.36□□□□□ -1.07
TCF4-218ENST00000563686 CEP162Q5TB80 1403 aa8.34□□□□□ -1.07
TCF4-218ENST00000563686 SMARCA4P51532 1647 aa8.34□□□□□ -1.07
TCF4-218ENST00000563686 ZNF316A6NFI3 1004 aaPredicted RBP8.33□□□□□ -1.08
TCF4-218ENST00000563686 CCDC88BA6NC98 1476 aa8.32□□□□□ -1.08
TCF4-218ENST00000563686 ABCC8Q09428 1581 aa8.31□□□□□ -1.08
TCF4-218ENST00000563686 BAZ1BQ9UIG0 1483 aaKnown RBP8.31□□□□□ -1.08
TCF4-218ENST00000563686 TNIKQ9UKE5 1360 aa8.31□□□□□ -1.08
TCF4-218ENST00000563686 ITGAEP38570 1179 aa8.3□□□□□ -1.08
TCF4-218ENST00000563686 CEP164Q9UPV0 1460 aa8.29□□□□□ -1.08
TCF4-218ENST00000563686 WRNQ14191 1432 aaPredicted RBP eCLIP8.29□□□□□ -1.08
TCF4-218ENST00000563686 ACIN1Q9UKV3 1341 aaKnown RBP8.28□□□□□ -1.08
TCF4-218ENST00000563686 NEFLP07196 543 aa8.27□□□□□ -1.09
TCF4-218ENST00000563686 CLIP1P30622 1438 aa8.26□□□□□ -1.09
TCF4-218ENST00000563686 SMARCA2P51531 1590 aa8.25□□□□□ -1.09
TCF4-218ENST00000563686 GTF3C3Q9Y5Q9 886 aa8.24□□□□□ -1.09
TCF4-218ENST00000563686 FAM50AQ14320 339 aaKnown RBP8.23□□□□□ -1.09
TCF4-218ENST00000563686 SOGA1O94964 1423 aa8.22□□□□□ -1.09
TCF4-218ENST00000563686 ERICH6Q7L0X2 663 aa8.21□□□□□ -1.1
TCF4-218ENST00000563686 SCAF1Q9H7N4 1312 aaKnown RBP8.17□□□□□ -1.1
TCF4-218ENST00000563686 NEUROD1Q13562 356 aa8.15□□□□□ -1.1
TCF4-218ENST00000563686 KIF27Q86VH2 1401 aa8.14□□□□□ -1.11
TCF4-218ENST00000563686 CLSPNQ9HAW4 1339 aa8.13□□□□□ -1.11
TCF4-218ENST00000563686 KIF21BO75037 1637 aa8.12□□□□□ -1.11
TCF4-218ENST00000563686 VPS8Q8N3P4 1428 aa8.11□□□□□ -1.11
TCF4-218ENST00000563686 UNC13AQ9UPW8 1703 aa8.09□□□□□ -1.11
TCF4-218ENST00000563686 ANP32CO43423 234 aa8.09□□□□□ -1.11
TCF4-218ENST00000563686 ATAD2BQ9ULI0 1458 aa8.09□□□□□ -1.11
TCF4-218ENST00000563686 P3H3Q8IVL6 736 aa8.08□□□□□ -1.12
TCF4-218ENST00000563686 TRIM52Q96A61 297 aa8.08□□□□□ -1.12
TCF4-218ENST00000563686 RUSC2Q8N2Y8 1516 aa8.06□□□□□ -1.12
TCF4-218ENST00000563686 EIF4G1Q04637 1599 aaKnown RBP8.05□□□□□ -1.12
TCF4-218ENST00000563686 MIER1Q8N108 512 aa8.05□□□□□ -1.12
TCF4-218ENST00000563686 SYNJ1O43426 1573 aa8.04□□□□□ -1.12
TCF4-218ENST00000563686 RAPGEF2Q9Y4G8 1499 aa8.04□□□□□ -1.12
TCF4-218ENST00000563686 TONSLQ96HA7 1378 aa8.01□□□□□ -1.13
TCF4-218ENST00000563686 CUX2O14529 1486 aa8.01□□□□□ -1.13
TCF4-218ENST00000563686 POLR3GLQ9BT43 218 aa8.01□□□□□ -1.13
TCF4-218ENST00000563686 TOP2BQ02880 1626 aa8□□□□□ -1.13
TCF4-218ENST00000563686 FHAD1B1AJZ9 1412 aa8□□□□□ -1.13
TCF4-218ENST00000563686 CCNB3Q8WWL7 1395 aa7.99□□□□□ -1.13
TCF4-218ENST00000563686 ERICH3Q5RHP9 1530 aa7.99□□□□□ -1.13
TCF4-218ENST00000563686 BCANQ96GW7 911 aa7.99□□□□□ -1.13
TCF4-218ENST00000563686 ARHGAP35Q9NRY4 1499 aa7.98□□□□□ -1.13
TCF4-218ENST00000563686 CARMIL1Q5VZK9 1371 aa7.97□□□□□ -1.13
TCF4-218ENST00000563686 PEG3Q9GZU2 1588 aa7.97□□□□□ -1.13
TCF4-218ENST00000563686 MTUS2Q5JR59 1369 aa7.97□□□□□ -1.13
TCF4-218ENST00000563686 BICRAQ9NZM4 1560 aa7.96□□□□□ -1.14
TCF4-218ENST00000563686 SETD5Q9C0A6 1442 aa7.95□□□□□ -1.14
TCF4-218ENST00000563686 HMGXB3Q12766 1538 aa7.95□□□□□ -1.14
TCF4-218ENST00000563686 BIVM-ERCC5R4GMW8 1640 aa7.94□□□□□ -1.14
TCF4-218ENST00000563686 CDK11AQ9UQ88 783 aaPredicted RBP7.94□□□□□ -1.14
TCF4-218ENST00000563686 DDX10Q13206 875 aaKnown RBP7.93□□□□□ -1.14
TCF4-218ENST00000563686 KANK4Q5T7N3 995 aaPredicted RBP7.92□□□□□ -1.14
TCF4-218ENST00000563686 FKBP8Q14318 412 aa7.92□□□□□ -1.14
TCF4-218ENST00000563686 ARAP1Q96P48 1450 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms