RNA–Protein interactions for RNA: ENST00000431651.5

COA1-208, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

APPRIS ALT2 TSL 3

Gene COA1, Length 720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-208ENST00000431651 NISCHQ9Y2I1 1504 aa27.07■■□□□ 1.92
COA1-208ENST00000431651 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
COA1-208ENST00000431651 ABCC9O60706 1549 aa23.88■■□□□ 1.41
COA1-208ENST00000431651 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
COA1-208ENST00000431651 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
COA1-208ENST00000431651 NACADO15069 1562 aa22.72■■□□□ 1.23
COA1-208ENST00000431651 ZCCHC6Q5VYS8 1495 aaKnown RBP22.5■■□□□ 1.19
COA1-208ENST00000431651 MYO15BQ96JP2 1530 aa22.48■■□□□ 1.19
COA1-208ENST00000431651 DCAF1Q9Y4B6 1507 aa22.33■■□□□ 1.17
COA1-208ENST00000431651 UNC13AQ9UPW8 1703 aa22.32■■□□□ 1.16
COA1-208ENST00000431651 PABPN1Q86U42 306 aaKnown RBP eCLIP22.32■■□□□ 1.16
COA1-208ENST00000431651 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
COA1-208ENST00000431651 DNAJC5BQ9UF47 199 aa22.15■■□□□ 1.14
COA1-208ENST00000431651 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
COA1-208ENST00000431651 SHROOM4Q9ULL8 1493 aa21.8■■□□□ 1.08
COA1-208ENST00000431651 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
COA1-208ENST00000431651 CC2D2AQ9P2K1 1620 aa21.55■■□□□ 1.04
COA1-208ENST00000431651 CECR2Q9BXF3 1484 aa21.44■■□□□ 1.02
COA1-208ENST00000431651 SMARCA4P51532 1647 aa21.05■□□□□ 0.96
COA1-208ENST00000431651 ATAD2BQ9ULI0 1458 aa21■□□□□ 0.95
COA1-208ENST00000431651 NCAPD3P42695 1498 aa20.99■□□□□ 0.95
COA1-208ENST00000431651 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
COA1-208ENST00000431651 SMARCA2P51531 1590 aa20.92■□□□□ 0.94
COA1-208ENST00000431651 MROH2BQ7Z745 1585 aa20.9■□□□□ 0.94
COA1-208ENST00000431651 HMGXB3Q12766 1538 aa20.84■□□□□ 0.93
COA1-208ENST00000431651 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
COA1-208ENST00000431651 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
COA1-208ENST00000431651 WIZO95785 1651 aa20.67■□□□□ 0.9
COA1-208ENST00000431651 NESP48681 1621 aa20.62■□□□□ 0.89
COA1-208ENST00000431651 RSF1Q96T23 1441 aaPredicted RBP20.59■□□□□ 0.89
COA1-208ENST00000431651 ERCC6Q03468 1493 aa20.56■□□□□ 0.88
COA1-208ENST00000431651 LAMC3Q9Y6N6 1575 aa20.45■□□□□ 0.86
COA1-208ENST00000431651 TOP2AP11388 1531 aaKnown RBP20.39■□□□□ 0.85
COA1-208ENST00000431651 CADPSQ9ULU8 1353 aa20.38■□□□□ 0.85
COA1-208ENST00000431651 CUX2O14529 1486 aa20.37■□□□□ 0.85
COA1-208ENST00000431651 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.84
COA1-208ENST00000431651 KIF21AQ7Z4S6 1674 aa20.32■□□□□ 0.84
COA1-208ENST00000431651 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
COA1-208ENST00000431651 CFTRP13569 1480 aa20.21■□□□□ 0.83
COA1-208ENST00000431651 CCDC88BA6NC98 1476 aa20.19■□□□□ 0.82
COA1-208ENST00000431651 FANCD2Q9BXW9 1451 aa20.16■□□□□ 0.82
COA1-208ENST00000431651 MRC2Q9UBG0 1479 aa20.15■□□□□ 0.82
COA1-208ENST00000431651 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.81
COA1-208ENST00000431651 WDR62O43379 1518 aa20.07■□□□□ 0.8
COA1-208ENST00000431651 DNAJC5Q9H3Z4 198 aa20.03■□□□□ 0.8
COA1-208ENST00000431651 PRDM2Q13029 1718 aa20■□□□□ 0.79
COA1-208ENST00000431651 URB2Q14146 1524 aaKnown RBP19.99■□□□□ 0.79
COA1-208ENST00000431651 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
COA1-208ENST00000431651 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
COA1-208ENST00000431651 DNMBPQ6XZF7 1577 aa19.75■□□□□ 0.75
COA1-208ENST00000431651 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
COA1-208ENST00000431651 IFT140Q96RY7 1462 aa19.72■□□□□ 0.75
COA1-208ENST00000431651 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
COA1-208ENST00000431651 POLA1P09884 1462 aaPredicted RBP19.63■□□□□ 0.73
COA1-208ENST00000431651 CUX1P39880 1505 aa19.61■□□□□ 0.73
COA1-208ENST00000431651 TARBP1Q13395 1621 aaKnown RBP19.61■□□□□ 0.73
COA1-208ENST00000431651 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
COA1-208ENST00000431651 AQRO60306 1485 aaKnown RBP eCLIP19.57■□□□□ 0.722e-9■□□□□ 10.8
COA1-208ENST00000431651 FGD5Q6ZNL6 1462 aa19.57■□□□□ 0.72
COA1-208ENST00000431651 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
COA1-208ENST00000431651 SOGA1O94964 1423 aa19.56■□□□□ 0.72
COA1-208ENST00000431651 OSCARQ8IYS5 282 aa19.54■□□□□ 0.72
COA1-208ENST00000431651 TDRD9Q8NDG6 1382 aaKnown RBP19.51■□□□□ 0.71
COA1-208ENST00000431651 WRNQ14191 1432 aaPredicted RBP eCLIP19.4■□□□□ 0.7
COA1-208ENST00000431651 FBLN2P98095 1184 aa19.39■□□□□ 0.69
COA1-208ENST00000431651 WDR97A6NE52 1622 aa19.38■□□□□ 0.69
COA1-208ENST00000431651 SYNJ1O43426 1573 aa19.38■□□□□ 0.69
COA1-208ENST00000431651 CHD1O14646 1710 aa19.37■□□□□ 0.69
COA1-208ENST00000431651 SNAPC4Q5SXM2 1469 aa19.36■□□□□ 0.69
COA1-208ENST00000431651 TOP2BQ02880 1626 aa19.36■□□□□ 0.69
COA1-208ENST00000431651 TRIM41Q8WV44 630 aa19.35■□□□□ 0.69
COA1-208ENST00000431651 BIVM-ERCC5R4GMW8 1640 aa19.35■□□□□ 0.69
COA1-208ENST00000431651 ABCA10Q8WWZ4 1543 aa19.34■□□□□ 0.69
COA1-208ENST00000431651 GRIN2BQ13224 1484 aa19.33■□□□□ 0.68
COA1-208ENST00000431651 GAPVD1Q14C86 1478 aa19.33■□□□□ 0.68
COA1-208ENST00000431651 ABCA5Q8WWZ7 1642 aa19.28■□□□□ 0.68
COA1-208ENST00000431651 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
COA1-208ENST00000431651 PBRM1Q86U86 1689 aa19.27■□□□□ 0.68
COA1-208ENST00000431651 CHMP7Q8WUX9 453 aaPredicted RBP19.27■□□□□ 0.68
COA1-208ENST00000431651 RIMBP3CA6NJZ7 1639 aa19.25■□□□□ 0.67
COA1-208ENST00000431651 RIMBP3BA6NNM3 1639 aa19.25■□□□□ 0.67
COA1-208ENST00000431651 RIMBP3Q9UFD9 1639 aa19.25■□□□□ 0.67
COA1-208ENST00000431651 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
COA1-208ENST00000431651 ARHGEF11O15085 1522 aa19.21■□□□□ 0.67
COA1-208ENST00000431651 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
COA1-208ENST00000431651 ADAMTS12P58397 1594 aa19.12■□□□□ 0.65
COA1-208ENST00000431651 CYB5RLQ6IPT4 315 aa19.1■□□□□ 0.65
COA1-208ENST00000431651 ERICH3Q5RHP9 1530 aa19.09■□□□□ 0.65
COA1-208ENST00000431651 GRIN2AQ12879 1464 aa19.09■□□□□ 0.65
COA1-208ENST00000431651 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.64
COA1-208ENST00000431651 ARAP1Q96P48 1450 aa19.07■□□□□ 0.64
COA1-208ENST00000431651 CEP170Q5SW79 1584 aa19.02■□□□□ 0.63
COA1-208ENST00000431651 NUP160Q12769 1436 aa19■□□□□ 0.63
COA1-208ENST00000431651 KIF27Q86VH2 1401 aa19■□□□□ 0.63
COA1-208ENST00000431651 IGF1RP08069 1367 aa18.97■□□□□ 0.63
COA1-208ENST00000431651 ERCC6L2Q5T890 1561 aa18.93■□□□□ 0.62
COA1-208ENST00000431651 CUL7Q14999 1698 aa18.86■□□□□ 0.61
COA1-208ENST00000431651 SHROOM2Q13796 1616 aa18.86■□□□□ 0.61
COA1-208ENST00000431651 RUSC2Q8N2Y8 1516 aa18.85■□□□□ 0.61
COA1-208ENST00000431651 CARMIL1Q5VZK9 1371 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms