RNA–Protein interactions for RNA: ENST00000637115.2

TCF4-283, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-283ENST00000637115 NISCHQ9Y2I1 1504 aa14.87□□□□□ -0.03
TCF4-283ENST00000637115 DCAF8L2P0C7V8 631 aa13.28□□□□□ -0.28
TCF4-283ENST00000637115 SHROOM4Q9ULL8 1493 aa13.18□□□□□ -0.3
TCF4-283ENST00000637115 SUPT5HO00267 1087 aaKnown RBP12.93□□□□□ -0.34
TCF4-283ENST00000637115 ZCCHC6Q5VYS8 1495 aaKnown RBP12.48□□□□□ -0.41
TCF4-283ENST00000637115 CCDC180Q9P1Z9 1646 aa12.47□□□□□ -0.41
TCF4-283ENST00000637115 ABCC9O60706 1549 aa12.29□□□□□ -0.44
TCF4-283ENST00000637115 EHMT2Q96KQ7 1210 aa12.16□□□□□ -0.46
TCF4-283ENST00000637115 CHIC1Q5VXU3 224 aa12.14□□□□□ -0.47
TCF4-283ENST00000637115 SCRIBQ14160 1630 aa12.07□□□□□ -0.48
TCF4-283ENST00000637115 FAM9AQ8IZU1 332 aaPredicted RBP12.06□□□□□ -0.48
TCF4-283ENST00000637115 DCAF1Q9Y4B6 1507 aa11.96□□□□□ -0.49
TCF4-283ENST00000637115 TRIM41Q8WV44 630 aa11.95□□□□□ -0.5
TCF4-283ENST00000637115 LOC105371045A0A1W2PR82 267 aa11.95□□□□□ -0.5
TCF4-283ENST00000637115 PABPN1Q86U42 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
TCF4-283ENST00000637115 PCGF6Q9BYE7 350 aa11.88□□□□□ -0.51
TCF4-283ENST00000637115 MYO15BQ96JP2 1530 aa11.85□□□□□ -0.51
TCF4-283ENST00000637115 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
TCF4-283ENST00000637115 NACADO15069 1562 aa11.75□□□□□ -0.53
TCF4-283ENST00000637115 CECR2Q9BXF3 1484 aa11.74□□□□□ -0.53
TCF4-283ENST00000637115 RB1CC1Q8TDY2 1594 aa11.7□□□□□ -0.54
TCF4-283ENST00000637115 TTBK1Q5TCY1 1321 aaPredicted RBP11.69□□□□□ -0.54
TCF4-283ENST00000637115 PPARGC1BQ86YN6 1023 aaKnown RBP11.67□□□□□ -0.54
TCF4-283ENST00000637115 MROH2BQ7Z745 1585 aa11.61□□□□□ -0.55
TCF4-283ENST00000637115 RANGAP1P46060 587 aaPredicted RBP11.59□□□□□ -0.55
TCF4-283ENST00000637115 UBTFP17480 764 aaKnown RBP11.53□□□□□ -0.56
TCF4-283ENST00000637115 HRCP23327 699 aa11.51□□□□□ -0.57
TCF4-283ENST00000637115 TRIM26Q12899 539 aaPredicted RBP11.51□□□□□ -0.57
TCF4-283ENST00000637115 WIZO95785 1651 aa11.5□□□□□ -0.57
TCF4-283ENST00000637115 BAZ1AQ9NRL2 1556 aaPredicted RBP11.46□□□□□ -0.57
TCF4-283ENST00000637115 CCDC88BA6NC98 1476 aa11.36□□□□□ -0.59
TCF4-283ENST00000637115 APLP2Q06481 763 aa11.34□□□□□ -0.59
TCF4-283ENST00000637115 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
TCF4-283ENST00000637115 SMARCA4P51532 1647 aa11.32□□□□□ -0.6
TCF4-283ENST00000637115 CSRNP3Q8WYN3 585 aa11.31□□□□□ -0.6
TCF4-283ENST00000637115 TOP2AP11388 1531 aaKnown RBP11.29□□□□□ -0.6
TCF4-283ENST00000637115 CCER1Q8TC90 406 aaPredicted RBP11.29□□□□□ -0.6
TCF4-283ENST00000637115 BAZ1BQ9UIG0 1483 aaKnown RBP11.27□□□□□ -0.6
TCF4-283ENST00000637115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.25□□□□□ -0.61
TCF4-283ENST00000637115 SOGA1O94964 1423 aa11.25□□□□□ -0.61
TCF4-283ENST00000637115 WRNQ14191 1432 aaPredicted RBP eCLIP11.22□□□□□ -0.61
TCF4-283ENST00000637115 ZEB1P37275 1124 aaPredicted RBP11.21□□□□□ -0.61
TCF4-283ENST00000637115 SMARCA2P51531 1590 aa11.2□□□□□ -0.62
TCF4-283ENST00000637115 ATP1B4Q9UN42 357 aaPredicted RBP11.19□□□□□ -0.62
TCF4-283ENST00000637115 HNRNPUL2Q1KMD3 747 aaKnown RBP11.18□□□□□ -0.62
TCF4-283ENST00000637115 BICRAQ9NZM4 1560 aa11.18□□□□□ -0.62
TCF4-283ENST00000637115 ATAD2BQ9ULI0 1458 aa11.18□□□□□ -0.62
TCF4-283ENST00000637115 UNC13AQ9UPW8 1703 aa11.15□□□□□ -0.62
TCF4-283ENST00000637115 RUSC2Q8N2Y8 1516 aa11.14□□□□□ -0.63
TCF4-283ENST00000637115 CEP162Q5TB80 1403 aa11.14□□□□□ -0.63
TCF4-283ENST00000637115 ITGAEP38570 1179 aa11.08□□□□□ -0.64
TCF4-283ENST00000637115 GOLGA3Q08378 1498 aa11.07□□□□□ -0.64
TCF4-283ENST00000637115 TNIKQ9UKE5 1360 aa11.06□□□□□ -0.64
TCF4-283ENST00000637115 EEA1Q15075 1411 aa11.05□□□□□ -0.64
TCF4-283ENST00000637115 P3H3Q8IVL6 736 aa11.03□□□□□ -0.64
TCF4-283ENST00000637115 CLIP1P30622 1438 aa11.03□□□□□ -0.64
TCF4-283ENST00000637115 CEP164Q9UPV0 1460 aa11□□□□□ -0.65
TCF4-283ENST00000637115 EIF4G1Q04637 1599 aaKnown RBP10.98□□□□□ -0.65
TCF4-283ENST00000637115 SYNJ1O43426 1573 aa10.96□□□□□ -0.65
TCF4-283ENST00000637115 RAPGEF2Q9Y4G8 1499 aa10.94□□□□□ -0.66
TCF4-283ENST00000637115 NCAPD3P42695 1498 aa10.93□□□□□ -0.66
TCF4-283ENST00000637115 KIF27Q86VH2 1401 aa10.92□□□□□ -0.66
TCF4-283ENST00000637115 PEG3Q9GZU2 1588 aa10.89□□□□□ -0.67
TCF4-283ENST00000637115 CUX2O14529 1486 aa10.89□□□□□ -0.67
TCF4-283ENST00000637115 FAM50AQ14320 339 aaKnown RBP10.88□□□□□ -0.67
TCF4-283ENST00000637115 CADPSQ9ULU8 1353 aa10.88□□□□□ -0.67
TCF4-283ENST00000637115 YTHDC1Q96MU7 727 aaKnown RBP10.87□□□□□ -0.67
TCF4-283ENST00000637115 ARID3CA6NKF2 412 aa10.86□□□□□ -0.67
TCF4-283ENST00000637115 DIEXFQ68CQ4 756 aaKnown RBP10.84□□□□□ -0.67
TCF4-283ENST00000637115 VPS8Q8N3P4 1428 aa10.83□□□□□ -0.68
TCF4-283ENST00000637115 KANK4Q5T7N3 995 aaPredicted RBP10.83□□□□□ -0.68
TCF4-283ENST00000637115 HMGXB3Q12766 1538 aa10.82□□□□□ -0.68
TCF4-283ENST00000637115 CARMIL1Q5VZK9 1371 aa10.81□□□□□ -0.68
TCF4-283ENST00000637115 CFTRP13569 1480 aa10.8□□□□□ -0.68
TCF4-283ENST00000637115 CUX1P39880 1505 aa10.8□□□□□ -0.68
TCF4-283ENST00000637115 DNAJC5BQ9UF47 199 aa10.79□□□□□ -0.68
TCF4-283ENST00000637115 CC2D2AQ9P2K1 1620 aa10.79□□□□□ -0.68
TCF4-283ENST00000637115 TOP2BQ02880 1626 aa10.78□□□□□ -0.68
TCF4-283ENST00000637115 FBLN2P98095 1184 aa10.78□□□□□ -0.68
TCF4-283ENST00000637115 FANCD2Q9BXW9 1451 aa10.77□□□□□ -0.68
TCF4-283ENST00000637115 NESP48681 1621 aa10.77□□□□□ -0.69
TCF4-283ENST00000637115 FGD5Q6ZNL6 1462 aa10.76□□□□□ -0.69
TCF4-283ENST00000637115 TDRD9Q8NDG6 1382 aaKnown RBP10.75□□□□□ -0.69
TCF4-283ENST00000637115 NEUROD1Q13562 356 aa10.75□□□□□ -0.69
TCF4-283ENST00000637115 RAD54L2Q9Y4B4 1467 aa10.75□□□□□ -0.69
TCF4-283ENST00000637115 KIF21BO75037 1637 aa10.74□□□□□ -0.69
TCF4-283ENST00000637115 ZNF316A6NFI3 1004 aaPredicted RBP10.74□□□□□ -0.69
TCF4-283ENST00000637115 IGF1RP08069 1367 aa10.73□□□□□ -0.69
TCF4-283ENST00000637115 CENPBP07199 599 aaPredicted RBP10.71□□□□□ -0.69
TCF4-283ENST00000637115 PRXQ9BXM0 1461 aa10.69□□□□□ -0.7
TCF4-283ENST00000637115 ARAP1Q96P48 1450 aa10.67□□□□□ -0.7
TCF4-283ENST00000637115 FHOD3Q2V2M9 1422 aa10.66□□□□□ -0.7
TCF4-283ENST00000637115 PDS5BQ9NTI5 1447 aa10.65□□□□□ -0.7
TCF4-283ENST00000637115 BIVM-ERCC5R4GMW8 1640 aa10.64□□□□□ -0.71
TCF4-283ENST00000637115 MTUS2Q5JR59 1369 aa10.63□□□□□ -0.71
TCF4-283ENST00000637115 CCNB3Q8WWL7 1395 aa10.63□□□□□ -0.71
TCF4-283ENST00000637115 TRIM52Q96A61 297 aa10.63□□□□□ -0.71
TCF4-283ENST00000637115 CHIC2Q9UKJ5 165 aa10.63□□□□□ -0.71
TCF4-283ENST00000637115 ERICH3Q5RHP9 1530 aa10.63□□□□□ -0.71
TCF4-283ENST00000637115 ARHGAP35Q9NRY4 1499 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms