RNA–Protein interactions for RNA: ENST00000590810.5

TCF4-247, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-247ENST00000590810 NISCHQ9Y2I1 1504 aa20.99■□□□□ 0.95
TCF4-247ENST00000590810 ABCC9O60706 1549 aa19.05■□□□□ 0.64
TCF4-247ENST00000590810 CCDC180Q9P1Z9 1646 aa18.9■□□□□ 0.62
TCF4-247ENST00000590810 RB1CC1Q8TDY2 1594 aa18.03■□□□□ 0.48
TCF4-247ENST00000590810 DNAJC5BQ9UF47 199 aa17.85■□□□□ 0.45
TCF4-247ENST00000590810 DCAF8L2P0C7V8 631 aa17.84■□□□□ 0.45
TCF4-247ENST00000590810 NACADO15069 1562 aa17.83■□□□□ 0.45
TCF4-247ENST00000590810 UNC13AQ9UPW8 1703 aa17.74■□□□□ 0.43
TCF4-247ENST00000590810 PABPN1Q86U42 306 aaKnown RBP eCLIP17.69■□□□□ 0.42
TCF4-247ENST00000590810 BICRAQ9NZM4 1560 aa17.51■□□□□ 0.39
TCF4-247ENST00000590810 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
TCF4-247ENST00000590810 ZCCHC6Q5VYS8 1495 aaKnown RBP17.38■□□□□ 0.37
TCF4-247ENST00000590810 SCRIBQ14160 1630 aa17.33■□□□□ 0.37
TCF4-247ENST00000590810 DCAF1Q9Y4B6 1507 aa17.25■□□□□ 0.35
TCF4-247ENST00000590810 CC2D2AQ9P2K1 1620 aa17.18■□□□□ 0.34
TCF4-247ENST00000590810 SHROOM4Q9ULL8 1493 aa17.15■□□□□ 0.34
TCF4-247ENST00000590810 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
TCF4-247ENST00000590810 EIF4G1Q04637 1599 aaKnown RBP17.11■□□□□ 0.33
TCF4-247ENST00000590810 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
TCF4-247ENST00000590810 ERCC6Q03468 1493 aa16.44■□□□□ 0.22
TCF4-247ENST00000590810 NCAPD3P42695 1498 aa16.42■□□□□ 0.22
TCF4-247ENST00000590810 ATAD2BQ9ULI0 1458 aa16.42■□□□□ 0.22
TCF4-247ENST00000590810 DNAJC5Q9H3Z4 198 aa16.39■□□□□ 0.21
TCF4-247ENST00000590810 SMARCA2P51531 1590 aa16.38■□□□□ 0.21
TCF4-247ENST00000590810 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
TCF4-247ENST00000590810 CUX2O14529 1486 aa16.35■□□□□ 0.21
TCF4-247ENST00000590810 NESP48681 1621 aa16.34■□□□□ 0.21
TCF4-247ENST00000590810 BAZ1AQ9NRL2 1556 aaPredicted RBP16.31■□□□□ 0.2
TCF4-247ENST00000590810 BAZ1BQ9UIG0 1483 aaKnown RBP16.31■□□□□ 0.2
TCF4-247ENST00000590810 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.19
TCF4-247ENST00000590810 PEG3Q9GZU2 1588 aa16.19■□□□□ 0.18
TCF4-247ENST00000590810 THOC2Q8NI27 1593 aaKnown RBP16.18■□□□□ 0.18
TCF4-247ENST00000590810 KIF21AQ7Z4S6 1674 aa16.18■□□□□ 0.18
TCF4-247ENST00000590810 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
TCF4-247ENST00000590810 WIZO95785 1651 aa16.08■□□□□ 0.16
TCF4-247ENST00000590810 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.15
TCF4-247ENST00000590810 CADPSQ9ULU8 1353 aa15.94■□□□□ 0.14
TCF4-247ENST00000590810 MRC2Q9UBG0 1479 aa15.93■□□□□ 0.14
TCF4-247ENST00000590810 WDR62O43379 1518 aa15.89■□□□□ 0.13
TCF4-247ENST00000590810 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
TCF4-247ENST00000590810 FANCD2Q9BXW9 1451 aa15.83■□□□□ 0.12
TCF4-247ENST00000590810 TOP2AP11388 1531 aaKnown RBP15.8■□□□□ 0.12
TCF4-247ENST00000590810 RSF1Q96T23 1441 aaPredicted RBP15.8■□□□□ 0.12
TCF4-247ENST00000590810 TRIM41Q8WV44 630 aa15.8■□□□□ 0.12
TCF4-247ENST00000590810 CFTRP13569 1480 aa15.75■□□□□ 0.11
TCF4-247ENST00000590810 PRDM2Q13029 1718 aa15.74■□□□□ 0.11
TCF4-247ENST00000590810 URB2Q14146 1524 aaKnown RBP15.72■□□□□ 0.11
TCF4-247ENST00000590810 CCDC88BA6NC98 1476 aa15.6■□□□□ 0.09
TCF4-247ENST00000590810 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
TCF4-247ENST00000590810 ZNF608Q9ULD9 1512 aaPredicted RBP15.56■□□□□ 0.08
TCF4-247ENST00000590810 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
TCF4-247ENST00000590810 IFT140Q96RY7 1462 aa15.51■□□□□ 0.07
TCF4-247ENST00000590810 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
TCF4-247ENST00000590810 RIMBP3CA6NJZ7 1639 aa15.5■□□□□ 0.07
TCF4-247ENST00000590810 RIMBP3BA6NNM3 1639 aa15.5■□□□□ 0.07
TCF4-247ENST00000590810 RIMBP3Q9UFD9 1639 aa15.5■□□□□ 0.07
TCF4-247ENST00000590810 DNMBPQ6XZF7 1577 aa15.47■□□□□ 0.07
TCF4-247ENST00000590810 AEBP2Q6ZN18 517 aaPredicted RBP15.47■□□□□ 0.07
TCF4-247ENST00000590810 CHD1O14646 1710 aa15.46■□□□□ 0.06
TCF4-247ENST00000590810 CHIC1Q5VXU3 224 aa15.41■□□□□ 0.06
TCF4-247ENST00000590810 TARBP1Q13395 1621 aaKnown RBP15.4■□□□□ 0.06
TCF4-247ENST00000590810 ARHGEF11O15085 1522 aa15.4■□□□□ 0.06
TCF4-247ENST00000590810 ABCC8Q09428 1581 aa15.4■□□□□ 0.06
TCF4-247ENST00000590810 AQRO60306 1485 aaKnown RBP eCLIP15.39■□□□□ 0.05
TCF4-247ENST00000590810 POLA1P09884 1462 aaPredicted RBP15.35■□□□□ 0.05
TCF4-247ENST00000590810 FBLN2P98095 1184 aa15.34■□□□□ 0.05
TCF4-247ENST00000590810 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.05
TCF4-247ENST00000590810 FGD5Q6ZNL6 1462 aa15.27■□□□□ 0.04
TCF4-247ENST00000590810 TDRD9Q8NDG6 1382 aaKnown RBP15.27■□□□□ 0.04
TCF4-247ENST00000590810 CYB5RLQ6IPT4 315 aa15.27■□□□□ 0.04
TCF4-247ENST00000590810 SOGA1O94964 1423 aa15.26■□□□□ 0.03
TCF4-247ENST00000590810 CUX1P39880 1505 aa15.25■□□□□ 0.03
TCF4-247ENST00000590810 SNAPC4Q5SXM2 1469 aa15.25■□□□□ 0.03
TCF4-247ENST00000590810 ARAP1Q96P48 1450 aa15.25■□□□□ 0.03
TCF4-247ENST00000590810 PBRM1Q86U86 1689 aa15.2■□□□□ 0.02
TCF4-247ENST00000590810 WDR97A6NE52 1622 aa15.2■□□□□ 0.02
TCF4-247ENST00000590810 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
TCF4-247ENST00000590810 SYNJ1O43426 1573 aa15.16■□□□□ 0.02
TCF4-247ENST00000590810 CLASP1Q7Z460 1538 aa15.16■□□□□ 0.02
TCF4-247ENST00000590810 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
TCF4-247ENST00000590810 CHMP7Q8WUX9 453 aaPredicted RBP15.14■□□□□ 0.01
TCF4-247ENST00000590810 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
TCF4-247ENST00000590810 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
TCF4-247ENST00000590810 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
TCF4-247ENST00000590810 GAPVD1Q14C86 1478 aa15.09■□□□□ 0.01
TCF4-247ENST00000590810 ABCA5Q8WWZ7 1642 aa15.08■□□□□ 0
TCF4-247ENST00000590810 ABCA10Q8WWZ4 1543 aa15.03■□□□□ -0
TCF4-247ENST00000590810 ADAMTS12P58397 1594 aa15□□□□□ -0.01
TCF4-247ENST00000590810 BIVM-ERCC5R4GMW8 1640 aa14.99□□□□□ -0.01
TCF4-247ENST00000590810 ERCC6L2Q5T890 1561 aa14.98□□□□□ -0.01
TCF4-247ENST00000590810 GRIN2AQ12879 1464 aa14.97□□□□□ -0.01
TCF4-247ENST00000590810 TOP2BQ02880 1626 aa14.96□□□□□ -0.01
TCF4-247ENST00000590810 WRNQ14191 1432 aaPredicted RBP eCLIP14.96□□□□□ -0.01
TCF4-247ENST00000590810 CEP170Q5SW79 1584 aa14.96□□□□□ -0.01
TCF4-247ENST00000590810 NUP160Q12769 1436 aa14.88□□□□□ -0.03
TCF4-247ENST00000590810 SHROOM2Q13796 1616 aa14.87□□□□□ -0.03
TCF4-247ENST00000590810 FHAD1B1AJZ9 1412 aa14.86□□□□□ -0.03
TCF4-247ENST00000590810 ERICH3Q5RHP9 1530 aa14.85□□□□□ -0.03
TCF4-247ENST00000590810 RUSC2Q8N2Y8 1516 aa14.79□□□□□ -0.04
TCF4-247ENST00000590810 KIF13AQ9H1H9 1805 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms