Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
HRH3Q9Y5N1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
HRH3Q9Y5N1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HRH3Q9Y5N1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
HRH3Q9Y5N1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HRH3Q9Y5N1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HRH3Q9Y5N1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HRH3Q9Y5N1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.86■■□□□ 1.41
HRH3Q9Y5N1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HRH3Q9Y5N1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HRH3Q9Y5N1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.84■■□□□ 1.41
HRH3Q9Y5N1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.84■■□□□ 1.41
HRH3Q9Y5N1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HRH3Q9Y5N1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HRH3Q9Y5N1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
HRH3Q9Y5N1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
HRH3Q9Y5N1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.81■■□□□ 1.4
HRH3Q9Y5N1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
HRH3Q9Y5N1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HRH3Q9Y5N1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
HRH3Q9Y5N1 AC127502.1-201ENST00000399971 1502 ntBASIC23.8■■□□□ 1.4
HRH3Q9Y5N1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
HRH3Q9Y5N1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.8■■□□□ 1.4
HRH3Q9Y5N1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
HRH3Q9Y5N1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HRH3Q9Y5N1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
HRH3Q9Y5N1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.79■■□□□ 1.4
HRH3Q9Y5N1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HRH3Q9Y5N1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
HRH3Q9Y5N1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HRH3Q9Y5N1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HRH3Q9Y5N1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.77■■□□□ 1.4
HRH3Q9Y5N1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HRH3Q9Y5N1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
HRH3Q9Y5N1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
HRH3Q9Y5N1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
HRH3Q9Y5N1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HRH3Q9Y5N1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.76■■□□□ 1.39
HRH3Q9Y5N1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.76■■□□□ 1.39
HRH3Q9Y5N1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HRH3Q9Y5N1 MIR639-201ENST00000384974 98 ntBASIC23.75■■□□□ 1.39
HRH3Q9Y5N1 MIR3648-2-201ENST00000581792 180 ntBASIC23.75■■□□□ 1.39
HRH3Q9Y5N1 MIR3648-1-201ENST00000615959 180 ntBASIC23.75■■□□□ 1.39
HRH3Q9Y5N1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HRH3Q9Y5N1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HRH3Q9Y5N1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
HRH3Q9Y5N1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HRH3Q9Y5N1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
HRH3Q9Y5N1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.74■■□□□ 1.39
HRH3Q9Y5N1 AC016575.1-201ENST00000607026 382 ntBASIC23.74■■□□□ 1.39
HRH3Q9Y5N1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HRH3Q9Y5N1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
HRH3Q9Y5N1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HRH3Q9Y5N1 MIR4449-201ENST00000578365 66 ntBASIC23.73■■□□□ 1.39
HRH3Q9Y5N1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.73■■□□□ 1.39
HRH3Q9Y5N1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
HRH3Q9Y5N1 DUX4L11-201ENST00000611504 1267 ntBASIC23.72■■□□□ 1.39
HRH3Q9Y5N1 DUX4L12-201ENST00000614593 1267 ntBASIC23.72■■□□□ 1.39
HRH3Q9Y5N1 DUX4L14-201ENST00000621227 1267 ntBASIC23.72■■□□□ 1.39
HRH3Q9Y5N1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
HRH3Q9Y5N1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HRH3Q9Y5N1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HRH3Q9Y5N1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.71■■□□□ 1.39
HRH3Q9Y5N1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HRH3Q9Y5N1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HRH3Q9Y5N1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.7■■□□□ 1.38
HRH3Q9Y5N1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
HRH3Q9Y5N1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.69■■□□□ 1.38
HRH3Q9Y5N1 LINC01971-201ENST00000617888 1048 ntBASIC23.69■■□□□ 1.38
HRH3Q9Y5N1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HRH3Q9Y5N1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HRH3Q9Y5N1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
HRH3Q9Y5N1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.68■■□□□ 1.38
HRH3Q9Y5N1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
HRH3Q9Y5N1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HRH3Q9Y5N1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HRH3Q9Y5N1 CR559946.2-201ENST00000623684 991 ntBASIC23.67■■□□□ 1.38
HRH3Q9Y5N1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HRH3Q9Y5N1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HRH3Q9Y5N1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.66■■□□□ 1.38
HRH3Q9Y5N1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
HRH3Q9Y5N1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
HRH3Q9Y5N1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
HRH3Q9Y5N1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HRH3Q9Y5N1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HRH3Q9Y5N1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
HRH3Q9Y5N1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
HRH3Q9Y5N1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.64■■□□□ 1.37
HRH3Q9Y5N1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.64■■□□□ 1.37
HRH3Q9Y5N1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HRH3Q9Y5N1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HRH3Q9Y5N1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.62■■□□□ 1.37
HRH3Q9Y5N1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
HRH3Q9Y5N1 LINC00273-201ENST00000539813 1452 ntBASIC23.62■■□□□ 1.37
HRH3Q9Y5N1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HRH3Q9Y5N1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
HRH3Q9Y5N1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
HRH3Q9Y5N1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
HRH3Q9Y5N1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.61■■□□□ 1.37
HRH3Q9Y5N1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms