Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.65■■□□□ 1.7
PCDHGA7Q9Y5G6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGA7Q9Y5G6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHGA7Q9Y5G6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGA7Q9Y5G6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGA7Q9Y5G6 AC108673.1-201ENST00000510422 1159 ntBASIC25.63■■□□□ 1.69
PCDHGA7Q9Y5G6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.63■■□□□ 1.69
PCDHGA7Q9Y5G6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGA7Q9Y5G6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
PCDHGA7Q9Y5G6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGA7Q9Y5G6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGA7Q9Y5G6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDHGA7Q9Y5G6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.62■■□□□ 1.69
PCDHGA7Q9Y5G6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.61■■□□□ 1.69
PCDHGA7Q9Y5G6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
PCDHGA7Q9Y5G6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGA7Q9Y5G6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDHGA7Q9Y5G6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDHGA7Q9Y5G6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGA7Q9Y5G6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
PCDHGA7Q9Y5G6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.68
PCDHGA7Q9Y5G6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA7Q9Y5G6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA7Q9Y5G6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA7Q9Y5G6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA7Q9Y5G6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA7Q9Y5G6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA7Q9Y5G6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA7Q9Y5G6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA7Q9Y5G6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHGA7Q9Y5G6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
PCDHGA7Q9Y5G6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGA7Q9Y5G6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGA7Q9Y5G6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGA7Q9Y5G6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGA7Q9Y5G6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.53■■□□□ 1.68
PCDHGA7Q9Y5G6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGA7Q9Y5G6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.53■■□□□ 1.68
PCDHGA7Q9Y5G6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.53■■□□□ 1.68
PCDHGA7Q9Y5G6 MIR6090-201ENST00000622481 60 ntBASIC25.53■■□□□ 1.68
PCDHGA7Q9Y5G6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGA7Q9Y5G6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGA7Q9Y5G6 MIR3648-2-201ENST00000581792 180 ntBASIC25.52■■□□□ 1.68
PCDHGA7Q9Y5G6 MIR3648-1-201ENST00000615959 180 ntBASIC25.52■■□□□ 1.68
PCDHGA7Q9Y5G6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGA7Q9Y5G6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGA7Q9Y5G6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
PCDHGA7Q9Y5G6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGA7Q9Y5G6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGA7Q9Y5G6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGA7Q9Y5G6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGA7Q9Y5G6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHGA7Q9Y5G6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
PCDHGA7Q9Y5G6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHGA7Q9Y5G6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.5■■□□□ 1.67
PCDHGA7Q9Y5G6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA7Q9Y5G6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.49■■□□□ 1.67
PCDHGA7Q9Y5G6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDHGA7Q9Y5G6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.49■■□□□ 1.67
PCDHGA7Q9Y5G6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA7Q9Y5G6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDHGA7Q9Y5G6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHGA7Q9Y5G6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGA7Q9Y5G6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDHGA7Q9Y5G6 LINC01971-201ENST00000617888 1048 ntBASIC25.48■■□□□ 1.67
PCDHGA7Q9Y5G6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGA7Q9Y5G6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
PCDHGA7Q9Y5G6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGA7Q9Y5G6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.47■■□□□ 1.67
PCDHGA7Q9Y5G6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.47■■□□□ 1.67
PCDHGA7Q9Y5G6 AC016575.1-201ENST00000607026 382 ntBASIC25.47■■□□□ 1.67
PCDHGA7Q9Y5G6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGA7Q9Y5G6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDHGA7Q9Y5G6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGA7Q9Y5G6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGA7Q9Y5G6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGA7Q9Y5G6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGA7Q9Y5G6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
PCDHGA7Q9Y5G6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.45■■□□□ 1.66
PCDHGA7Q9Y5G6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGA7Q9Y5G6 AL135925.1-201ENST00000605920 1701 ntBASIC25.45■■□□□ 1.66
PCDHGA7Q9Y5G6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
PCDHGA7Q9Y5G6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGA7Q9Y5G6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGA7Q9Y5G6 AC142086.6-201ENST00000621154 1765 ntBASIC25.44■■□□□ 1.66
PCDHGA7Q9Y5G6 DUX4L11-201ENST00000611504 1267 ntBASIC25.44■■□□□ 1.66
PCDHGA7Q9Y5G6 DUX4L12-201ENST00000614593 1267 ntBASIC25.44■■□□□ 1.66
PCDHGA7Q9Y5G6 DUX4L14-201ENST00000621227 1267 ntBASIC25.44■■□□□ 1.66
PCDHGA7Q9Y5G6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGA7Q9Y5G6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
PCDHGA7Q9Y5G6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.43■■□□□ 1.66
PCDHGA7Q9Y5G6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
PCDHGA7Q9Y5G6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGA7Q9Y5G6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGA7Q9Y5G6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHGA7Q9Y5G6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGA7Q9Y5G6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGA7Q9Y5G6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.41■■□□□ 1.66
PCDHGA7Q9Y5G6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGA7Q9Y5G6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms