Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
PCDHB11Q9Y5F2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHB11Q9Y5F2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.43■■□□□ 1.66
PCDHB11Q9Y5F2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
PCDHB11Q9Y5F2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHB11Q9Y5F2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHB11Q9Y5F2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHB11Q9Y5F2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHB11Q9Y5F2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.41■■□□□ 1.66
PCDHB11Q9Y5F2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.41■■□□□ 1.66
PCDHB11Q9Y5F2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHB11Q9Y5F2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHB11Q9Y5F2 MIR6090-201ENST00000622481 60 ntBASIC25.4■■□□□ 1.66
PCDHB11Q9Y5F2 ST7-AS1-201ENST00000456775 1889 ntBASIC25.38■■□□□ 1.65
PCDHB11Q9Y5F2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB11Q9Y5F2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.38■■□□□ 1.65
PCDHB11Q9Y5F2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB11Q9Y5F2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB11Q9Y5F2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHB11Q9Y5F2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
PCDHB11Q9Y5F2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHB11Q9Y5F2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.37■■□□□ 1.65
PCDHB11Q9Y5F2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHB11Q9Y5F2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHB11Q9Y5F2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHB11Q9Y5F2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.36■■□□□ 1.65
PCDHB11Q9Y5F2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHB11Q9Y5F2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHB11Q9Y5F2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
PCDHB11Q9Y5F2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.35■■□□□ 1.65
PCDHB11Q9Y5F2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.35■■□□□ 1.65
PCDHB11Q9Y5F2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.35■■□□□ 1.65
PCDHB11Q9Y5F2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHB11Q9Y5F2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHB11Q9Y5F2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHB11Q9Y5F2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHB11Q9Y5F2 MIR3648-2-201ENST00000581792 180 ntBASIC25.34■■□□□ 1.65
PCDHB11Q9Y5F2 AC016575.1-201ENST00000607026 382 ntBASIC25.34■■□□□ 1.65
PCDHB11Q9Y5F2 MIR3648-1-201ENST00000615959 180 ntBASIC25.34■■□□□ 1.65
PCDHB11Q9Y5F2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHB11Q9Y5F2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHB11Q9Y5F2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHB11Q9Y5F2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHB11Q9Y5F2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHB11Q9Y5F2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDHB11Q9Y5F2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDHB11Q9Y5F2 LINC01971-201ENST00000617888 1048 ntBASIC25.31■■□□□ 1.64
PCDHB11Q9Y5F2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHB11Q9Y5F2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
PCDHB11Q9Y5F2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
PCDHB11Q9Y5F2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.3■■□□□ 1.64
PCDHB11Q9Y5F2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHB11Q9Y5F2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHB11Q9Y5F2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHB11Q9Y5F2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHB11Q9Y5F2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHB11Q9Y5F2 DUX4L11-201ENST00000611504 1267 ntBASIC25.29■■□□□ 1.64
PCDHB11Q9Y5F2 DUX4L12-201ENST00000614593 1267 ntBASIC25.29■■□□□ 1.64
PCDHB11Q9Y5F2 DUX4L14-201ENST00000621227 1267 ntBASIC25.29■■□□□ 1.64
PCDHB11Q9Y5F2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
PCDHB11Q9Y5F2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHB11Q9Y5F2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
PCDHB11Q9Y5F2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHB11Q9Y5F2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHB11Q9Y5F2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHB11Q9Y5F2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHB11Q9Y5F2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.26■■□□□ 1.63
PCDHB11Q9Y5F2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
PCDHB11Q9Y5F2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHB11Q9Y5F2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHB11Q9Y5F2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHB11Q9Y5F2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDHB11Q9Y5F2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHB11Q9Y5F2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHB11Q9Y5F2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHB11Q9Y5F2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHB11Q9Y5F2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHB11Q9Y5F2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHB11Q9Y5F2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHB11Q9Y5F2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
PCDHB11Q9Y5F2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHB11Q9Y5F2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.22■■□□□ 1.63
PCDHB11Q9Y5F2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHB11Q9Y5F2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHB11Q9Y5F2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHB11Q9Y5F2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHB11Q9Y5F2 AC139426.1-201ENST00000568218 2529 ntBASIC25.21■■□□□ 1.63
PCDHB11Q9Y5F2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.2■■□□□ 1.62
PCDHB11Q9Y5F2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHB11Q9Y5F2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHB11Q9Y5F2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.19■■□□□ 1.62
PCDHB11Q9Y5F2 CR559946.2-201ENST00000623684 991 ntBASIC25.19■■□□□ 1.62
PCDHB11Q9Y5F2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHB11Q9Y5F2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.18■■□□□ 1.62
PCDHB11Q9Y5F2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PCDHB11Q9Y5F2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.17■■□□□ 1.62
PCDHB11Q9Y5F2 HSD17B1P1-201ENST00000590052 955 ntBASIC25.17■■□□□ 1.62
PCDHB11Q9Y5F2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PCDHB11Q9Y5F2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
PCDHB11Q9Y5F2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms